RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 FPGSQ05932 587 aa20.9■□□□□ 0.94
SSU72-203ENST00000378725 PPIGQ13427 754 aaKnown RBP eCLIP20.9■□□□□ 0.94
SSU72-203ENST00000378725 TMEM119Q4V9L6 283 aa20.9■□□□□ 0.94
SSU72-203ENST00000378725 SPECC1Q5M775 1068 aa20.9■□□□□ 0.94
SSU72-203ENST00000378725 IER5Q5VY09 327 aa20.9■□□□□ 0.94
SSU72-203ENST00000378725 USP49Q70CQ1 688 aa20.9■□□□□ 0.94
SSU72-203ENST00000378725 LRRC71Q8N4P6 559 aa20.9■□□□□ 0.94
SSU72-203ENST00000378725 SLC7A3Q8WY07 619 aa20.9■□□□□ 0.94
SSU72-203ENST00000378725 EPSTI1Q96J88 318 aa20.9■□□□□ 0.94
SSU72-203ENST00000378725 CHAMP1Q96JM3 812 aa20.9■□□□□ 0.94
SSU72-203ENST00000378725 IPO9Q96P70 1041 aaKnown RBP20.9■□□□□ 0.94
SSU72-203ENST00000378725 SUGCTQ9HAC7 445 aa20.9■□□□□ 0.94
SSU72-203ENST00000378725 DNM3Q9UQ16 869 aa20.9■□□□□ 0.94
SSU72-203ENST00000378725 TRIP12Q14669 1992 aaPredicted RBP20.9■□□□□ 0.94
SSU72-203ENST00000378725 MYH15Q9Y2K3 1946 aa20.9■□□□□ 0.94
SSU72-203ENST00000378725 CUTAO60888 179 aa20.89■□□□□ 0.93
SSU72-203ENST00000378725 DGAT1O75907 488 aa20.89■□□□□ 0.93
SSU72-203ENST00000378725 EYA4O95677 639 aa20.89■□□□□ 0.93
SSU72-203ENST00000378725 CLCN3P51790 818 aa20.89■□□□□ 0.93
SSU72-203ENST00000378725 MRPS6P82932 125 aaKnown RBP20.89■□□□□ 0.93
SSU72-203ENST00000378725 MBTPS1Q14703 1052 aa20.89■□□□□ 0.93
SSU72-203ENST00000378725 AXDND1Q5T1B0 1012 aaPredicted RBP20.89■□□□□ 0.93
SSU72-203ENST00000378725 PRPF38BQ5VTL8 546 aaKnown RBP20.89■□□□□ 0.93
SSU72-203ENST00000378725 KCNK18Q7Z418 384 aa20.89■□□□□ 0.93
SSU72-203ENST00000378725 ZNF710Q8N1W2 664 aa20.89■□□□□ 0.93
SSU72-203ENST00000378725 LEO1Q8WVC0 666 aaPredicted RBP20.89■□□□□ 0.93
SSU72-203ENST00000378725 SYMPKQ92797 1274 aaKnown RBP20.89■□□□□ 0.93
SSU72-203ENST00000378725 CALML4Q96GE6 196 aa20.89■□□□□ 0.93
SSU72-203ENST00000378725 PCDHA7Q9UN72 937 aa20.89■□□□□ 0.93
SSU72-203ENST00000378725 LTBP2Q14767 1821 aa20.89■□□□□ 0.93
SSU72-203ENST00000378725 E9PMD0 336 aa20.88■□□□□ 0.93
SSU72-203ENST00000378725 GAS2O43903 313 aaKnown RBP20.88■□□□□ 0.93
SSU72-203ENST00000378725 NBNO60934 754 aa20.88■□□□□ 0.93
SSU72-203ENST00000378725 CXCL10P02778 98 aa20.88■□□□□ 0.93
SSU72-203ENST00000378725 DNM2P50570 870 aa20.88■□□□□ 0.93
SSU72-203ENST00000378725 POLGP54098 1239 aaPredicted RBP20.88■□□□□ 0.93
SSU72-203ENST00000378725 DRP2Q13474 957 aa20.88■□□□□ 0.93
SSU72-203ENST00000378725 C16orf59Q7L2K0 433 aa20.88■□□□□ 0.93
SSU72-203ENST00000378725 RPUSD2Q8IZ73 545 aaKnown RBP20.88■□□□□ 0.93
SSU72-203ENST00000378725 CELF4Q9BZC1 486 aaKnown RBP20.88■□□□□ 0.93
SSU72-203ENST00000378725 SCAND2PQ9GZW5 306 aaPredicted RBP20.88■□□□□ 0.93
SSU72-203ENST00000378725 BHMT2Q9H2M3 363 aa20.88■□□□□ 0.93
SSU72-203ENST00000378725 PRO3102Q9H379 93 aa20.88■□□□□ 0.93
SSU72-203ENST00000378725 IL23AQ9NPF7 189 aa20.88■□□□□ 0.93
SSU72-203ENST00000378725 XPNPEP1Q9NQW7 623 aa20.88■□□□□ 0.93
SSU72-203ENST00000378725 CHMP5Q9NZZ3 219 aa20.88■□□□□ 0.93
SSU72-203ENST00000378725 CDY2AQ9Y6F7 541 aa20.88■□□□□ 0.93
SSU72-203ENST00000378725 KAT6AQ92794 2004 aa20.88■□□□□ 0.93
SSU72-203ENST00000378725 GPR32O75388 356 aa20.87■□□□□ 0.93
SSU72-203ENST00000378725 CTSHP09668 335 aa20.87■□□□□ 0.93
SSU72-203ENST00000378725 EPHB4P54760 987 aa20.87■□□□□ 0.93
SSU72-203ENST00000378725 CDC42EP1Q00587 391 aa20.87■□□□□ 0.93
SSU72-203ENST00000378725 EMC2Q15006 297 aa20.87■□□□□ 0.93
SSU72-203ENST00000378725 KARSQ15046 597 aaKnown RBP20.87■□□□□ 0.93
SSU72-203ENST00000378725 ZRSR1Q15695 479 aaKnown RBP20.87■□□□□ 0.93
SSU72-203ENST00000378725 CDK5RAP3Q96JB5 506 aa20.87■□□□□ 0.93
SSU72-203ENST00000378725 MAP7D2Q96T17 732 aa20.87■□□□□ 0.93
SSU72-203ENST00000378725 SUCLA2Q9P2R7 463 aaPredicted RBP20.87■□□□□ 0.93
SSU72-203ENST00000378725 TRPV2Q9Y5S1 764 aa20.87■□□□□ 0.93
SSU72-203ENST00000378725 SQORQ9Y6N5 450 aa20.87■□□□□ 0.93
SSU72-203ENST00000378725 ARHGEF35A5YM69 484 aa20.86■□□□□ 0.93
SSU72-203ENST00000378725 VTNP04004 478 aa20.86■□□□□ 0.93
SSU72-203ENST00000378725 PFKMP08237 780 aa20.86■□□□□ 0.93
SSU72-203ENST00000378725 CYP11B2P19099 503 aa20.86■□□□□ 0.93
SSU72-203ENST00000378725 NCLP19338 710 aaKnown RBP20.86■□□□□ 0.93
SSU72-203ENST00000378725 ME1P48163 572 aa20.86■□□□□ 0.93
SSU72-203ENST00000378725 TMEM62Q0P6H9 643 aa20.86■□□□□ 0.93
SSU72-203ENST00000378725 SHC4Q6S5L8 630 aa20.86■□□□□ 0.93
SSU72-203ENST00000378725 PADI6Q6TGC4 694 aa20.86■□□□□ 0.93
SSU72-203ENST00000378725 TCP11Q8WWU5 503 aa20.86■□□□□ 0.93
SSU72-203ENST00000378725 SPATA32Q96LK8 384 aa20.86■□□□□ 0.93
SSU72-203ENST00000378725 CCDC43Q96MW1 224 aaKnown RBP20.86■□□□□ 0.93
SSU72-203ENST00000378725 PLIN2Q99541 437 aa20.86■□□□□ 0.93
SSU72-203ENST00000378725 MTRQ99707 1265 aa20.86■□□□□ 0.93
SSU72-203ENST00000378725 OSBPL7Q9BZF2 842 aa20.86■□□□□ 0.93
SSU72-203ENST00000378725 ADAMTS10Q9H324 1103 aa20.86■□□□□ 0.93
SSU72-203ENST00000378725 ATP6V0A4Q9HBG4 840 aa20.86■□□□□ 0.93
SSU72-203ENST00000378725 CCDC39Q9UFE4 941 aa20.86■□□□□ 0.93
SSU72-203ENST00000378725 AKT3Q9Y243 479 aa20.86■□□□□ 0.93
SSU72-203ENST00000378725 M0QZ92 97 aa20.85■□□□□ 0.93
SSU72-203ENST00000378725 TXLNAP40222 546 aa20.85■□□□□ 0.93
SSU72-203ENST00000378725 CRYBB1P53674 252 aaPredicted RBP20.85■□□□□ 0.93
SSU72-203ENST00000378725 SYT2Q8N9I0 419 aaPredicted RBP20.85■□□□□ 0.93
SSU72-203ENST00000378725 LRRC15Q8TF66 581 aa20.85■□□□□ 0.93
SSU72-203ENST00000378725 TMEM143Q96AN5 459 aa20.85■□□□□ 0.93
SSU72-203ENST00000378725 UBE2OQ9C0C9 1292 aaKnown RBP20.85■□□□□ 0.93
SSU72-203ENST00000378725 CDHR5Q9HBB8 845 aa20.85■□□□□ 0.93
SSU72-203ENST00000378725 BLOC1S4Q9NUP1 217 aa20.85■□□□□ 0.93
SSU72-203ENST00000378725 ASAP2O43150 1006 aa20.84■□□□□ 0.93
SSU72-203ENST00000378725 USO1O60763 962 aaKnown RBP20.84■□□□□ 0.93
SSU72-203ENST00000378725 ACRP10323 421 aa20.84■□□□□ 0.93
SSU72-203ENST00000378725 PLCG1P19174 1290 aa20.84■□□□□ 0.93
SSU72-203ENST00000378725 ARL2P36404 184 aa20.84■□□□□ 0.93
SSU72-203ENST00000378725 GPC3P51654 580 aa20.84■□□□□ 0.93
SSU72-203ENST00000378725 SLC12A3P55017 1021 aa20.84■□□□□ 0.93
SSU72-203ENST00000378725 NLRP11P59045 1033 aaKnown RBP20.84■□□□□ 0.93
SSU72-203ENST00000378725 KIZQ2M2Z5 673 aa20.84■□□□□ 0.93
SSU72-203ENST00000378725 FBXO47Q5MNV8 452 aa20.84■□□□□ 0.93
SSU72-203ENST00000378725 TMEM240Q5SV17 173 aa20.84■□□□□ 0.93
SSU72-203ENST00000378725 ADALQ6DHV7 355 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms