RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 ENTPD3O75355 529 aa21.31■■□□□ 1
SHROOM1-202ENST00000378676 PPFIA1Q13136 1202 aa21.31■■□□□ 1
SHROOM1-202ENST00000378676 CCDC174Q6PII3 467 aa21.31■■□□□ 1
SHROOM1-202ENST00000378676 MYCT1Q8N699 235 aa21.31■■□□□ 1
SHROOM1-202ENST00000378676 TPCN2Q8NHX9 752 aa21.31■■□□□ 1
SHROOM1-202ENST00000378676 RUFY1Q96T51 708 aa21.31■■□□□ 1
SHROOM1-202ENST00000378676 TUFT1Q9NNX1 390 aa21.31■■□□□ 1
SHROOM1-202ENST00000378676 WRAP73Q9P2S5 460 aaPredicted RBP21.31■■□□□ 1
SHROOM1-202ENST00000378676 GRIN2DO15399 1336 aa21.3■■□□□ 1
SHROOM1-202ENST00000378676 GFPT2O94808 682 aa21.3■■□□□ 1
SHROOM1-202ENST00000378676 STAT2P52630 851 aa21.3■■□□□ 1
SHROOM1-202ENST00000378676 FAM186BQ8IYM0 893 aa21.3■■□□□ 1
SHROOM1-202ENST00000378676 FLAD1Q8NFF5 587 aa21.3■■□□□ 1
SHROOM1-202ENST00000378676 PIK3R5Q8WYR1 880 aa21.3■■□□□ 1
SHROOM1-202ENST00000378676 FIZ1Q96SL8 496 aa21.3■■□□□ 1
SHROOM1-202ENST00000378676 COL2A1P02458 1487 aaPredicted RBP21.3■■□□□ 1
SHROOM1-202ENST00000378676 CES2O00748 559 aa21.3■■□□□ 1
SHROOM1-202ENST00000378676 EIF3DO15371 548 aaKnown RBP eCLIP21.3■■□□□ 1
SHROOM1-202ENST00000378676 FLOT1O75955 427 aa21.3■■□□□ 1
SHROOM1-202ENST00000378676 IRAK1P51617 712 aa21.3■■□□□ 1
SHROOM1-202ENST00000378676 TNNC1P63316 161 aa21.3■■□□□ 1
SHROOM1-202ENST00000378676 C10orf67Q8IYJ2 551 aa21.3■■□□□ 1
SHROOM1-202ENST00000378676 LNX1Q8TBB1 728 aaPredicted RBP21.3■■□□□ 1
SHROOM1-202ENST00000378676 FRMPD4Q14CM0 1322 aa21.29■■□□□ 1
SHROOM1-202ENST00000378676 GTPBP10A4D1E9 387 aaKnown RBP21.29■■□□□ 1
SHROOM1-202ENST00000378676 KRT14P02533 472 aa21.29■■□□□ 1
SHROOM1-202ENST00000378676 DNAJC21Q5F1R6 531 aaKnown RBP21.29■■□□□ 1
SHROOM1-202ENST00000378676 SH2D3CQ8N5H7 860 aa21.29■■□□□ 1
SHROOM1-202ENST00000378676 SLC5A5Q92911 643 aa21.29■■□□□ 1
SHROOM1-202ENST00000378676 CEP104O60308 925 aa21.29■■□□□ 1
SHROOM1-202ENST00000378676 ERVK-9P63128 1117 aa21.29■■□□□ 1
SHROOM1-202ENST00000378676 PPP2R5CQ13362 524 aa21.29■■□□□ 1
SHROOM1-202ENST00000378676 SLC15A2Q16348 729 aa21.29■■□□□ 1
SHROOM1-202ENST00000378676 KCTD19Q17RG1 926 aaPredicted RBP21.29■■□□□ 1
SHROOM1-202ENST00000378676 IQCKQ8N0W5 287 aa21.29■■□□□ 1
SHROOM1-202ENST00000378676 U2AF1L4Q8WU68 220 aaKnown RBP21.29■■□□□ 1
SHROOM1-202ENST00000378676 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.29■■□□□ 1
SHROOM1-202ENST00000378676 GOLGB1Q14789 3259 aaKnown RBP21.28■■□□□ 1
SHROOM1-202ENST00000378676 ZNF233A6NK53 670 aa21.28■■□□□ 1
SHROOM1-202ENST00000378676 PRELPP51888 382 aa21.28■■□□□ 1
SHROOM1-202ENST00000378676 TTC19Q6DKK2 380 aaPredicted RBP21.28■■□□□ 1
SHROOM1-202ENST00000378676 MREGQ8N565 214 aa21.28■■□□□ 1
SHROOM1-202ENST00000378676 METTL13Q8N6R0 699 aa21.28■■□□□ 1
SHROOM1-202ENST00000378676 PROCA1Q8NCQ7 364 aaPredicted RBP21.28■■□□□ 1
SHROOM1-202ENST00000378676 CAPS2Q9BXY5 557 aa21.28■■□□□ 1
SHROOM1-202ENST00000378676 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.28■■□□□ 1
SHROOM1-202ENST00000378676 ATP8B3O60423 1300 aa21.28■■□□□ 1
SHROOM1-202ENST00000378676 H2AFZP0C0S5 128 aa21.28■■□□□ 1
SHROOM1-202ENST00000378676 CHRNA5P30532 468 aa21.28■■□□□ 1
SHROOM1-202ENST00000378676 PSMC2P35998 433 aaKnown RBP21.28■■□□□ 1
SHROOM1-202ENST00000378676 CFAP58Q5T655 872 aa21.28■■□□□ 1
SHROOM1-202ENST00000378676 H2AFVQ71UI9 128 aa21.28■■□□□ 1
SHROOM1-202ENST00000378676 SCFD2Q8WU76 684 aa21.28■■□□□ 1
SHROOM1-202ENST00000378676 PBKQ96KB5 322 aa21.28■■□□□ 1
SHROOM1-202ENST00000378676 PARVGQ9HBI0 331 aa21.28■■□□□ 1
SHROOM1-202ENST00000378676 STXBP5LQ9Y2K9 1186 aa21.28■■□□□ 1
SHROOM1-202ENST00000378676 NOC2LQ9Y3T9 749 aaKnown RBP21.28■■□□□ 1
SHROOM1-202ENST00000378676 YDJCA8MPS7 323 aa21.27■■□□□ 1
SHROOM1-202ENST00000378676 EVI5O60447 810 aa21.27■■□□□ 1
SHROOM1-202ENST00000378676 ANXA13P27216 316 aa21.27■■□□□ 1
SHROOM1-202ENST00000378676 GNGT1P63211 74 aa21.27■■□□□ 1
SHROOM1-202ENST00000378676 IFI16Q16666 785 aaKnown RBP21.27■■□□□ 1
SHROOM1-202ENST00000378676 SKIDA1Q1XH10 827 aa21.27■■□□□ 1
SHROOM1-202ENST00000378676 KCTD16Q68DU8 428 aa21.27■■□□□ 1
SHROOM1-202ENST00000378676 CC2D2BQ6DHV5 1058 aa21.27■■□□□ 1
SHROOM1-202ENST00000378676 BANK1Q8NDB2 785 aa21.27■■□□□ 1
SHROOM1-202ENST00000378676 AP1M1Q9BXS5 423 aa21.27■■□□□ 1
SHROOM1-202ENST00000378676 RABEP2Q9H5N1 569 aa21.27■■□□□ 1
SHROOM1-202ENST00000378676 FAM170AA1A519 330 aa21.26■□□□□ 0.99
SHROOM1-202ENST00000378676 TCP10L2B9ZVM9 353 aa21.26■□□□□ 0.99
SHROOM1-202ENST00000378676 ANKRD65E5RJM6 399 aa21.26■□□□□ 0.99
SHROOM1-202ENST00000378676 F8VZ95 297 aa21.26■□□□□ 0.99
SHROOM1-202ENST00000378676 TRIM49P0CI25 452 aa21.26■□□□□ 0.99
SHROOM1-202ENST00000378676 TRIM49CP0CI26 452 aa21.26■□□□□ 0.99
SHROOM1-202ENST00000378676 FERP16591 822 aa21.26■□□□□ 0.99
SHROOM1-202ENST00000378676 ECHS1P30084 290 aa21.26■□□□□ 0.99
SHROOM1-202ENST00000378676 FMO5P49326 533 aa21.26■□□□□ 0.99
SHROOM1-202ENST00000378676 NFIL3Q16649 462 aa21.26■□□□□ 0.99
SHROOM1-202ENST00000378676 CBWD6Q4V339 395 aa21.26■□□□□ 0.99
SHROOM1-202ENST00000378676 CBWD3Q5JTY5 395 aa21.26■□□□□ 0.99
SHROOM1-202ENST00000378676 CBWD5Q5RIA9 395 aa21.26■□□□□ 0.99
SHROOM1-202ENST00000378676 SLFN11Q7Z7L1 901 aa21.26■□□□□ 0.99
SHROOM1-202ENST00000378676 ACTRT1Q8TDG2 376 aa21.26■□□□□ 0.99
SHROOM1-202ENST00000378676 UNC45AQ9H3U1 944 aa21.26■□□□□ 0.99
SHROOM1-202ENST00000378676 SHTN1A0MZ66 631 aa21.26■□□□□ 0.99
SHROOM1-202ENST00000378676 GCOM1H8Y6P7 765 aaPredicted RBP21.26■□□□□ 0.99
SHROOM1-202ENST00000378676 GAS7O60861 476 aa21.26■□□□□ 0.99
SHROOM1-202ENST00000378676 POLR2MP0CAP2 368 aa21.26■□□□□ 0.99
SHROOM1-202ENST00000378676 STAT1P42224 750 aa21.26■□□□□ 0.99
SHROOM1-202ENST00000378676 CYP2J2P51589 502 aa21.26■□□□□ 0.99
SHROOM1-202ENST00000378676 SLC30A5Q8TAD4 765 aa21.26■□□□□ 0.99
SHROOM1-202ENST00000378676 GPR88Q9GZN0 384 aa21.26■□□□□ 0.99
SHROOM1-202ENST00000378676 ARHGEF10LQ9HCE6 1279 aa21.26■□□□□ 0.99
SHROOM1-202ENST00000378676 IGSF9BQ9UPX0 1349 aa21.26■□□□□ 0.99
SHROOM1-202ENST00000378676 TMCO5BA8MYB1 307 aa21.25■□□□□ 0.99
SHROOM1-202ENST00000378676 ARP10275 920 aa21.25■□□□□ 0.99
SHROOM1-202ENST00000378676 SOX5P35711 763 aa21.25■□□□□ 0.99
SHROOM1-202ENST00000378676 GALCP54803 685 aa21.25■□□□□ 0.99
SHROOM1-202ENST00000378676 STYK1Q6J9G0 422 aa21.25■□□□□ 0.99
SHROOM1-202ENST00000378676 PEX26Q7Z412 305 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms