RNA–Protein interactions for RNA: ENST00000378183.8

TRIM13-203, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 1,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-203ENST00000378183 CLIC4Q9Y696 253 aa22.95■■□□□ 1.26
TRIM13-203ENST00000378183 SLC4A7Q9Y6M7 1214 aa22.95■■□□□ 1.26
TRIM13-203ENST00000378183 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.94■■□□□ 1.26
TRIM13-203ENST00000378183 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.94■■□□□ 1.26
TRIM13-203ENST00000378183 M0QZ92 97 aa22.94■■□□□ 1.26
TRIM13-203ENST00000378183 TMOD1P28289 359 aa22.94■■□□□ 1.26
TRIM13-203ENST00000378183 XKR9Q5GH70 373 aa22.94■■□□□ 1.26
TRIM13-203ENST00000378183 ERMNQ8TAM6 284 aa22.94■■□□□ 1.26
TRIM13-203ENST00000378183 PIGOQ8TEQ8 1089 aa22.94■■□□□ 1.26
TRIM13-203ENST00000378183 SEPT8Q92599 483 aa22.94■■□□□ 1.26
TRIM13-203ENST00000378183 DHX33Q9H6R0 707 aaKnown RBP22.94■■□□□ 1.26
TRIM13-203ENST00000378183 ANKEF1Q9NU02 776 aa22.94■■□□□ 1.26
TRIM13-203ENST00000378183 ABHD14A-ACY1A0A1B0GW23 586 aa22.93■■□□□ 1.26
TRIM13-203ENST00000378183 XRCC6P12956 609 aaKnown RBP eCLIP22.93■■□□□ 1.268e-7■■□□□ 11.8
TRIM13-203ENST00000378183 CDC25AP30304 524 aa22.93■■□□□ 1.26
TRIM13-203ENST00000378183 WDR5P61964 334 aaKnown RBP22.93■■□□□ 1.26
TRIM13-203ENST00000378183 SMAD3P84022 425 aaKnown RBP22.93■■□□□ 1.26
TRIM13-203ENST00000378183 PKP1Q13835 747 aa22.93■■□□□ 1.26
TRIM13-203ENST00000378183 IKBKEQ14164 716 aa22.93■■□□□ 1.26
TRIM13-203ENST00000378183 KIZQ2M2Z5 673 aa22.93■■□□□ 1.26
TRIM13-203ENST00000378183 ARL6IP4Q66PJ3 421 aaKnown RBP22.93■■□□□ 1.26
TRIM13-203ENST00000378183 POTEGQ6S5H5 508 aa22.93■■□□□ 1.26
TRIM13-203ENST00000378183 TSHZ1Q6ZSZ6 1077 aa22.93■■□□□ 1.26
TRIM13-203ENST00000378183 TMEM40Q8WWA1 233 aa22.93■■□□□ 1.26
TRIM13-203ENST00000378183 MMTAG2Q9BU76 263 aaKnown RBP22.93■■□□□ 1.26
TRIM13-203ENST00000378183 IFIH1Q9BYX4 1025 aaKnown RBP22.93■■□□□ 1.26
TRIM13-203ENST00000378183 ADAMTS10Q9H324 1103 aa22.93■■□□□ 1.26
TRIM13-203ENST00000378183 ZSCAN16Q9H4T2 348 aaPredicted RBP22.93■■□□□ 1.26
TRIM13-203ENST00000378183 AKT3Q9Y243 479 aa22.93■■□□□ 1.26
TRIM13-203ENST00000378183 PPME1Q9Y570 386 aa22.93■■□□□ 1.26
TRIM13-203ENST00000378183 SQORQ9Y6N5 450 aa22.93■■□□□ 1.26
TRIM13-203ENST00000378183 SZT2Q5T011 3432 aa22.93■■□□□ 1.26
TRIM13-203ENST00000378183 CCT6AP40227 531 aaKnown RBP22.92■■□□□ 1.26
TRIM13-203ENST00000378183 RFC5P40937 340 aa22.92■■□□□ 1.26
TRIM13-203ENST00000378183 RARRES1P49788 294 aa22.92■■□□□ 1.26
TRIM13-203ENST00000378183 NLRP11P59045 1033 aaKnown RBP22.92■■□□□ 1.26
TRIM13-203ENST00000378183 PTPAQ15257 358 aa22.92■■□□□ 1.26
TRIM13-203ENST00000378183 ZNF668Q96K58 619 aaPredicted RBP22.92■■□□□ 1.26
TRIM13-203ENST00000378183 MAP7D2Q96T17 732 aa22.92■■□□□ 1.26
TRIM13-203ENST00000378183 RAB34Q9BZG1 259 aa22.92■■□□□ 1.26
TRIM13-203ENST00000378183 BMP2KQ9NSY1 1161 aaPredicted RBP22.92■■□□□ 1.26
TRIM13-203ENST00000378183 GINS2Q9Y248 185 aa22.92■■□□□ 1.26
TRIM13-203ENST00000378183 VWA3AA6NCI4 1184 aa22.91■■□□□ 1.26
TRIM13-203ENST00000378183 CD52P31358 61 aa22.91■■□□□ 1.26
TRIM13-203ENST00000378183 GPC3P51654 580 aa22.91■■□□□ 1.26
TRIM13-203ENST00000378183 CRYBB1P53674 252 aaPredicted RBP22.91■■□□□ 1.26
TRIM13-203ENST00000378183 POLGP54098 1239 aaPredicted RBP22.91■■□□□ 1.26
TRIM13-203ENST00000378183 DEFB103AP81534 67 aa22.91■■□□□ 1.26
TRIM13-203ENST00000378183 FOXD4L5Q5VV16 416 aaPredicted RBP22.91■■□□□ 1.26
TRIM13-203ENST00000378183 HAUS3Q68CZ6 603 aa22.91■■□□□ 1.26
TRIM13-203ENST00000378183 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.91■■□□□ 1.26
TRIM13-203ENST00000378183 USP38Q8NB14 1042 aa22.91■■□□□ 1.26
TRIM13-203ENST00000378183 SNX29Q8TEQ0 813 aa22.91■■□□□ 1.26
TRIM13-203ENST00000378183 FOXD4L4Q8WXT5 416 aaPredicted RBP22.91■■□□□ 1.26
TRIM13-203ENST00000378183 APBB2Q92870 758 aa22.91■■□□□ 1.26
TRIM13-203ENST00000378183 NACC1Q96RE7 527 aa22.91■■□□□ 1.26
TRIM13-203ENST00000378183 OSMRQ99650 979 aa22.91■■□□□ 1.26
TRIM13-203ENST00000378183 XPNPEP1Q9NQW7 623 aa22.91■■□□□ 1.26
TRIM13-203ENST00000378183 SUCLA2Q9P2R7 463 aaPredicted RBP22.91■■□□□ 1.26
TRIM13-203ENST00000378183 NOC2LQ9Y3T9 749 aaKnown RBP22.91■■□□□ 1.26
TRIM13-203ENST00000378183 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.9■■□□□ 1.26
TRIM13-203ENST00000378183 BMP15O95972 392 aa22.9■■□□□ 1.26
TRIM13-203ENST00000378183 ZSCAN22P10073 491 aaPredicted RBP22.9■■□□□ 1.26
TRIM13-203ENST00000378183 ATP2A2P16615 1042 aaKnown RBP22.9■■□□□ 1.26
TRIM13-203ENST00000378183 MUTP22033 750 aa22.9■■□□□ 1.26
TRIM13-203ENST00000378183 PBX2P40425 430 aa22.9■■□□□ 1.26
TRIM13-203ENST00000378183 GRIN1Q05586 938 aa22.9■■□□□ 1.26
TRIM13-203ENST00000378183 EMC2Q15006 297 aa22.9■■□□□ 1.26
TRIM13-203ENST00000378183 TMCO2Q7Z6W1 182 aaPredicted RBP22.9■■□□□ 1.26
TRIM13-203ENST00000378183 SLC7A3Q8WY07 619 aa22.9■■□□□ 1.26
TRIM13-203ENST00000378183 USP28Q96RU2 1077 aa22.9■■□□□ 1.26
TRIM13-203ENST00000378183 JPH2Q9BR39 696 aaPredicted RBP22.9■■□□□ 1.26
TRIM13-203ENST00000378183 DBR1Q9UK59 544 aaKnown RBP22.9■■□□□ 1.26
TRIM13-203ENST00000378183 PADI3Q9ULW8 664 aa22.9■■□□□ 1.26
TRIM13-203ENST00000378183 EFCAB14O75071 495 aa22.89■■□□□ 1.25
TRIM13-203ENST00000378183 PDIA4P13667 645 aaKnown RBP22.89■■□□□ 1.25
TRIM13-203ENST00000378183 DNM2P50570 870 aa22.89■■□□□ 1.25
TRIM13-203ENST00000378183 RABGGTBP53611 331 aa22.89■■□□□ 1.25
TRIM13-203ENST00000378183 KSR1Q8IVT5 923 aa22.89■■□□□ 1.25
TRIM13-203ENST00000378183 EXOC8Q8IYI6 725 aa22.89■■□□□ 1.25
TRIM13-203ENST00000378183 PHOSPHO2Q8TCD6 241 aa22.89■■□□□ 1.25
TRIM13-203ENST00000378183 TMEM143Q96AN5 459 aa22.89■■□□□ 1.25
TRIM13-203ENST00000378183 SLC9A7Q96T83 725 aa22.89■■□□□ 1.25
TRIM13-203ENST00000378183 PBX4Q9BYU1 374 aa22.89■■□□□ 1.25
TRIM13-203ENST00000378183 ERVK-5Q9HDB9 667 aa22.89■■□□□ 1.25
TRIM13-203ENST00000378183 KIAA1024Q9UPX6 916 aa22.89■■□□□ 1.25
TRIM13-203ENST00000378183 STK24Q9Y6E0 443 aa22.89■■□□□ 1.25
TRIM13-203ENST00000378183 F13A1P00488 732 aa22.88■■□□□ 1.25
TRIM13-203ENST00000378183 KCNJ6P48051 423 aa22.88■■□□□ 1.25
TRIM13-203ENST00000378183 CEBPZQ03701 1054 aaKnown RBP22.88■■□□□ 1.25
TRIM13-203ENST00000378183 KRT79Q5XKE5 535 aa22.88■■□□□ 1.25
TRIM13-203ENST00000378183 RTN4RL1Q86UN2 441 aaPredicted RBP22.88■■□□□ 1.25
TRIM13-203ENST00000378183 ZNF710Q8N1W2 664 aa22.88■■□□□ 1.25
TRIM13-203ENST00000378183 LINC01599Q8WXQ3 324 aa22.88■■□□□ 1.25
TRIM13-203ENST00000378183 MTRQ99707 1265 aa22.88■■□□□ 1.25
TRIM13-203ENST00000378183 TMX1Q9H3N1 280 aa22.88■■□□□ 1.25
TRIM13-203ENST00000378183 DDX19AQ9NUU7 478 aaKnown RBP22.88■■□□□ 1.25
TRIM13-203ENST00000378183 RPS6KA5O75582 802 aa22.87■■□□□ 1.25
TRIM13-203ENST00000378183 PAK2Q13177 524 aa22.87■■□□□ 1.25
TRIM13-203ENST00000378183 FAM228AQ86W67 206 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms