RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 LIG3P49916 1009 aa15.1■□□□□ 0.01
TRIM13-202ENST00000378182 TBC1D9BQ66K14 1250 aa15.1■□□□□ 0.01
TRIM13-202ENST00000378182 RAPGEF5Q92565 580 aa15.1■□□□□ 0.01
TRIM13-202ENST00000378182 DRC3Q9H069 523 aa15.1■□□□□ 0.01
TRIM13-202ENST00000378182 PUS7LQ9H0K6 701 aaKnown RBP15.1■□□□□ 0.01
TRIM13-202ENST00000378182 TOPORSQ9NS56 1045 aaPredicted RBP15.1■□□□□ 0.01
TRIM13-202ENST00000378182 CYP2D6P10635 497 aa15.1■□□□□ 0.01
TRIM13-202ENST00000378182 CHRNA5P30532 468 aa15.1■□□□□ 0.01
TRIM13-202ENST00000378182 PAPOLAP51003 745 aaKnown RBP15.1■□□□□ 0.01
TRIM13-202ENST00000378182 HDLBPQ00341 1268 aaKnown RBP15.1■□□□□ 0.01
TRIM13-202ENST00000378182 B4GALNT2Q8NHY0 566 aa15.1■□□□□ 0.01
TRIM13-202ENST00000378182 RFWD2Q8NHY2 731 aa15.1■□□□□ 0.01
TRIM13-202ENST00000378182 KIF12Q96FN5 646 aa15.1■□□□□ 0.01
TRIM13-202ENST00000378182 SPZ1Q9BXG8 430 aa15.1■□□□□ 0.01
TRIM13-202ENST00000378182 HEMGNQ9BXL5 484 aa15.1■□□□□ 0.01
TRIM13-202ENST00000378182 HSPA4LO95757 839 aa15.1■□□□□ 0.01
TRIM13-202ENST00000378182 TMC4Q7Z404 712 aa15.1■□□□□ 0.01
TRIM13-202ENST00000378182 CARMIL3Q8ND23 1372 aa15.09■□□□□ 0.01
TRIM13-202ENST00000378182 ALDH1A1P00352 501 aa15.09■□□□□ 0.01
TRIM13-202ENST00000378182 WHAMMP3Q1A5X7 153 aa15.09■□□□□ 0.01
TRIM13-202ENST00000378182 TAF1BQ53T94 588 aaPredicted RBP15.09■□□□□ 0.01
TRIM13-202ENST00000378182 GPBP1L1Q9HC44 474 aaPredicted RBP15.09■□□□□ 0.01
TRIM13-202ENST00000378182 NLRP10Q86W26 655 aa15.09■□□□□ 0.01
TRIM13-202ENST00000378182 BHMTQ93088 406 aa15.09■□□□□ 0.01
TRIM13-202ENST00000378182 FEM1BQ9UK73 627 aa15.09■□□□□ 0.01
TRIM13-202ENST00000378182 EXOC1LA0A1B0GW35 172 aa15.09■□□□□ 0.01
TRIM13-202ENST00000378182 ZSCAN32Q9NX65 697 aa15.09■□□□□ 0.01
TRIM13-202ENST00000378182 TJP2Q9UDY2 1190 aa15.09■□□□□ 0.01
TRIM13-202ENST00000378182 PCSK1NQ9UHG2 260 aa15.09■□□□□ 0.01
TRIM13-202ENST00000378182 PALLDQ8WX93 1383 aa15.09■□□□□ 0.01
TRIM13-202ENST00000378182 LAD1O00515 517 aa15.09■□□□□ 0.01
TRIM13-202ENST00000378182 TNFAIP2Q03169 654 aa15.09■□□□□ 0.01
TRIM13-202ENST00000378182 SLFN12LQ6IEE8 588 aa15.09■□□□□ 0.01
TRIM13-202ENST00000378182 SPATA2LQ8IUW3 424 aaPredicted RBP15.09■□□□□ 0.01
TRIM13-202ENST00000378182 USP44Q9H0E7 712 aa15.09■□□□□ 0.01
TRIM13-202ENST00000378182 PPP3CCP48454 512 aa15.09■□□□□ 0.01
TRIM13-202ENST00000378182 PPP2R3CQ969Q6 453 aa15.09■□□□□ 0.01
TRIM13-202ENST00000378182 RPAP3Q9H6T3 665 aaPredicted RBP15.09■□□□□ 0.01
TRIM13-202ENST00000378182 PIN4Q9Y237 131 aaKnown RBP15.09■□□□□ 0.01
TRIM13-202ENST00000378182 L3MBTL1Q9Y468 752 aa15.09■□□□□ 0.01
TRIM13-202ENST00000378182 ARHGAP10A1A4S6 786 aa15.08■□□□□ 0.01
TRIM13-202ENST00000378182 SUPT3HB4E1H0 165 aa15.08■□□□□ 0.01
TRIM13-202ENST00000378182 AGRPO00253 132 aa15.08■□□□□ 0.01
TRIM13-202ENST00000378182 ACSL3O95573 720 aa15.08■□□□□ 0.01
TRIM13-202ENST00000378182 NUMBP49757 651 aa15.08■□□□□ 0.01
TRIM13-202ENST00000378182 CYTH2Q99418 400 aa15.08■□□□□ 0.01
TRIM13-202ENST00000378182 ST8SIA6P61647 398 aa15.08■□□□□ 0.01
TRIM13-202ENST00000378182 SYCP2LQ5T4T6 812 aa15.08■□□□□ 0.01
TRIM13-202ENST00000378182 TMEM270Q6UE05 265 aa15.08■□□□□ 0.01
TRIM13-202ENST00000378182 ZNF589Q86UQ0 364 aaPredicted RBP15.08■□□□□ 0.01
TRIM13-202ENST00000378182 SEPT5Q99719 369 aaPredicted RBP15.08■□□□□ 0.01
TRIM13-202ENST00000378182 SMYD3Q9H7B4 428 aa15.08■□□□□ 0.01
TRIM13-202ENST00000378182 SPTLC3Q9NUV7 552 aa15.08■□□□□ 0.01
TRIM13-202ENST00000378182 ZNF212Q9UDV6 495 aa15.08■□□□□ 0.01
TRIM13-202ENST00000378182 ABCD1P33897 745 aa15.08■□□□□ 0
TRIM13-202ENST00000378182 BHMT2Q9H2M3 363 aa15.08■□□□□ 0
TRIM13-202ENST00000378182 GABBR1Q9UBS5 961 aa15.08■□□□□ 0
TRIM13-202ENST00000378182 UBE4BO95155 1302 aa15.08■□□□□ 0
TRIM13-202ENST00000378182 ATP7AQ04656 1500 aa15.08■□□□□ 0
TRIM13-202ENST00000378182 ZFYVE16Q7Z3T8 1539 aa15.08■□□□□ 0
TRIM13-202ENST00000378182 EEF1DP29692 281 aaKnown RBP15.08■□□□□ 0
TRIM13-202ENST00000378182 TAF11Q15544 211 aa15.08■□□□□ 0
TRIM13-202ENST00000378182 GIPC2Q8TF65 315 aa15.08■□□□□ 0
TRIM13-202ENST00000378182 DCUN1D1Q96GG9 259 aa15.08■□□□□ 0
TRIM13-202ENST00000378182 USP17L10C9JJH3 530 aa15.08■□□□□ 0
TRIM13-202ENST00000378182 NPM3O75607 178 aaKnown RBP15.08■□□□□ 0
TRIM13-202ENST00000378182 DAB2P98082 770 aa15.08■□□□□ 0
TRIM13-202ENST00000378182 SYTL3Q4VX76 610 aa15.08■□□□□ 0
TRIM13-202ENST00000378182 PRAMEF18Q5VWM3 479 aa15.08■□□□□ 0
TRIM13-202ENST00000378182 PLXNC1O60486 1568 aa15.08■□□□□ 0
TRIM13-202ENST00000378182 WASHC5Q12768 1159 aa15.08■□□□□ 0
TRIM13-202ENST00000378182 GTF2H3Q13889 308 aa15.08■□□□□ 0
TRIM13-202ENST00000378182 TMEM179Q6ZVK1 233 aa15.08■□□□□ 0
TRIM13-202ENST00000378182 SLC35F6Q8N357 371 aa15.08■□□□□ 0
TRIM13-202ENST00000378182 PIGBQ92521 554 aa15.08■□□□□ 0
TRIM13-202ENST00000378182 TEX12Q9BXU0 123 aa15.08■□□□□ 0
TRIM13-202ENST00000378182 GCOM2Q9BZD3 368 aaPredicted RBP15.08■□□□□ 0
TRIM13-202ENST00000378182 ABCC12Q96J65 1359 aa15.08■□□□□ 0
TRIM13-202ENST00000378182 GCC2Q8IWJ2 1684 aa15.07■□□□□ 0
TRIM13-202ENST00000378182 ZNF335Q9H4Z2 1342 aaPredicted RBP15.07■□□□□ 0
TRIM13-202ENST00000378182 CYBBP04839 570 aa15.07■□□□□ 0
TRIM13-202ENST00000378182 HSPA8P11142 646 aaKnown RBP15.07■□□□□ 0
TRIM13-202ENST00000378182 RALAP11233 206 aa15.07■□□□□ 0
TRIM13-202ENST00000378182 PCP11498 1178 aaKnown RBP15.07■□□□□ 0
TRIM13-202ENST00000378182 MRPS25P82663 173 aaKnown RBP15.07■□□□□ 0
TRIM13-202ENST00000378182 ZNF658Q5TYW1 1059 aaPredicted RBP15.07■□□□□ 0
TRIM13-202ENST00000378182 RAB42Q8N4Z0 105 aa15.07■□□□□ 0
TRIM13-202ENST00000378182 MAGEB10Q96LZ2 347 aaPredicted RBP15.07■□□□□ 0
TRIM13-202ENST00000378182 MAN1B1Q9UKM7 699 aa15.07■□□□□ 0
TRIM13-202ENST00000378182 PCDHB7Q9Y5E2 793 aa15.07■□□□□ 0
TRIM13-202ENST00000378182 PLEKHA8P1O95397 391 aa15.07■□□□□ 0
TRIM13-202ENST00000378182 SMIM5Q71RC9 77 aa15.07■□□□□ 0
TRIM13-202ENST00000378182 TADA2BQ86TJ2 420 aa15.07■□□□□ 0
TRIM13-202ENST00000378182 MUC3BQ9H195 1237 aa15.07■□□□□ 0
TRIM13-202ENST00000378182 C6orf203Q9P0P8 240 aaPredicted RBP15.07■□□□□ 0
TRIM13-202ENST00000378182 ZSWIM5Q9P217 1185 aa15.07■□□□□ 0
TRIM13-202ENST00000378182 CMA1P23946 247 aa15.07■□□□□ 0
TRIM13-202ENST00000378182 PSMC1P62191 440 aaKnown RBP15.07■□□□□ 0
TRIM13-202ENST00000378182 SDE2Q6IQ49 451 aa15.07■□□□□ 0
TRIM13-202ENST00000378182 AGR3Q8TD06 166 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms