RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 MGAT3Q09327 533 aa14.77□□□□□ -0.04
CKAP2-202ENST00000378034 PSRC1Q6PGN9 363 aaPredicted RBP14.77□□□□□ -0.04
CKAP2-202ENST00000378034 POTEGQ6S5H5 508 aa14.77□□□□□ -0.04
CKAP2-202ENST00000378034 CHRDL2Q6WN34 429 aa14.77□□□□□ -0.04
CKAP2-202ENST00000378034 KCNG4Q8TDN1 519 aa14.77□□□□□ -0.04
CKAP2-202ENST00000378034 CIZ1Q9ULV3 898 aaPredicted RBP14.77□□□□□ -0.04
CKAP2-202ENST00000378034 KIAA1024Q9UPX6 916 aa14.77□□□□□ -0.04
CKAP2-202ENST00000378034 SQORQ9Y6N5 450 aa14.77□□□□□ -0.04
CKAP2-202ENST00000378034 ZBTB39O15060 712 aa14.76□□□□□ -0.05
CKAP2-202ENST00000378034 CDC25AP30304 524 aa14.76□□□□□ -0.05
CKAP2-202ENST00000378034 FAM43BQ6ZT52 329 aaPredicted RBP14.76□□□□□ -0.05
CKAP2-202ENST00000378034 CABP7Q86V35 215 aa14.76□□□□□ -0.05
CKAP2-202ENST00000378034 PIGOQ8TEQ8 1089 aa14.76□□□□□ -0.05
CKAP2-202ENST00000378034 TCP11Q8WWU5 503 aa14.76□□□□□ -0.05
CKAP2-202ENST00000378034 SUGCTQ9HAC7 445 aa14.76□□□□□ -0.05
CKAP2-202ENST00000378034 DDX19AQ9NUU7 478 aaKnown RBP14.76□□□□□ -0.05
CKAP2-202ENST00000378034 DNM3Q9UQ16 869 aa14.76□□□□□ -0.05
CKAP2-202ENST00000378034 TRPV2Q9Y5S1 764 aa14.76□□□□□ -0.05
CKAP2-202ENST00000378034 CHRNA1P02708 482 aa14.76□□□□□ -0.05
CKAP2-202ENST00000378034 DNM1Q05193 864 aaKnown RBP14.76□□□□□ -0.05
CKAP2-202ENST00000378034 ECM1Q16610 540 aa14.76□□□□□ -0.05
CKAP2-202ENST00000378034 ZNF579Q8NAF0 562 aaKnown RBP14.76□□□□□ -0.05
CKAP2-202ENST00000378034 USP38Q8NB14 1042 aa14.76□□□□□ -0.05
CKAP2-202ENST00000378034 CALML4Q96GE6 196 aa14.76□□□□□ -0.05
CKAP2-202ENST00000378034 CDK5RAP3Q96JB5 506 aa14.76□□□□□ -0.05
CKAP2-202ENST00000378034 SH2D3AQ9BRG2 576 aa14.76□□□□□ -0.05
CKAP2-202ENST00000378034 CELF4Q9BZC1 486 aaKnown RBP14.76□□□□□ -0.05
CKAP2-202ENST00000378034 CCSER1Q9C0I3 900 aa14.76□□□□□ -0.05
CKAP2-202ENST00000378034 CSRNP2Q9H175 543 aa14.76□□□□□ -0.05
CKAP2-202ENST00000378034 CDY2AQ9Y6F7 541 aa14.76□□□□□ -0.05
CKAP2-202ENST00000378034 SCN5AQ14524 2016 aa14.75□□□□□ -0.05
CKAP2-202ENST00000378034 NBNO60934 754 aa14.75□□□□□ -0.05
CKAP2-202ENST00000378034 EYA4O95677 639 aa14.75□□□□□ -0.05
CKAP2-202ENST00000378034 CTSHP09668 335 aa14.75□□□□□ -0.05
CKAP2-202ENST00000378034 CLCN3P51790 818 aa14.75□□□□□ -0.05
CKAP2-202ENST00000378034 KRT85P78386 507 aa14.75□□□□□ -0.05
CKAP2-202ENST00000378034 GRIN1Q05586 938 aa14.75□□□□□ -0.05
CKAP2-202ENST00000378034 GPNMBQ14956 572 aa14.75□□□□□ -0.05
CKAP2-202ENST00000378034 EMC2Q15006 297 aa14.75□□□□□ -0.05
CKAP2-202ENST00000378034 FOXD4L6Q3SYB3 417 aaPredicted RBP14.75□□□□□ -0.05
CKAP2-202ENST00000378034 FOXD4L3Q6VB84 417 aaPredicted RBP14.75□□□□□ -0.05
CKAP2-202ENST00000378034 C16orf59Q7L2K0 433 aa14.75□□□□□ -0.05
CKAP2-202ENST00000378034 LRRC71Q8N4P6 559 aa14.75□□□□□ -0.05
CKAP2-202ENST00000378034 MTRQ99707 1265 aa14.75□□□□□ -0.05
CKAP2-202ENST00000378034 ATP6V0A4Q9HBG4 840 aa14.75□□□□□ -0.05
CKAP2-202ENST00000378034 RCOR1Q9UKL0 485 aa14.75□□□□□ -0.05
CKAP2-202ENST00000378034 AKT3Q9Y243 479 aa14.75□□□□□ -0.05
CKAP2-202ENST00000378034 ARHGEF35A5YM69 484 aa14.74□□□□□ -0.05
CKAP2-202ENST00000378034 FGBP02675 491 aa14.74□□□□□ -0.05
CKAP2-202ENST00000378034 ACTN1P12814 892 aa14.74□□□□□ -0.05
CKAP2-202ENST00000378034 TXLNAP40222 546 aa14.74□□□□□ -0.05
CKAP2-202ENST00000378034 CRYBB1P53674 252 aaPredicted RBP14.74□□□□□ -0.05
CKAP2-202ENST00000378034 EPHB4P54760 987 aa14.74□□□□□ -0.05
CKAP2-202ENST00000378034 MKRN4PQ13434 485 aaPredicted RBP14.74□□□□□ -0.05
CKAP2-202ENST00000378034 MBTPS1Q14703 1052 aa14.74□□□□□ -0.05
CKAP2-202ENST00000378034 TMEM119Q4V9L6 283 aa14.74□□□□□ -0.05
CKAP2-202ENST00000378034 TMEM240Q5SV17 173 aa14.74□□□□□ -0.05
CKAP2-202ENST00000378034 DEFB128Q7Z7B8 93 aa14.74□□□□□ -0.05
CKAP2-202ENST00000378034 VWCEQ96DN2 955 aa14.74□□□□□ -0.05
CKAP2-202ENST00000378034 PNMA5Q96PV4 448 aa14.74□□□□□ -0.05
CKAP2-202ENST00000378034 PCDH10Q9P2E7 1040 aa14.74□□□□□ -0.05
CKAP2-202ENST00000378034 SIP14410 1827 aa14.74□□□□□ -0.05
CKAP2-202ENST00000378034 ASAP2O43150 1006 aa14.74□□□□□ -0.05
CKAP2-202ENST00000378034 CUTAO60888 179 aa14.74□□□□□ -0.05
CKAP2-202ENST00000378034 GRB10Q13322 594 aa14.74□□□□□ -0.05
CKAP2-202ENST00000378034 CNKSR3Q6P9H4 555 aa14.74□□□□□ -0.05
CKAP2-202ENST00000378034 ZNF365Q70YC5 407 aa14.74□□□□□ -0.05
CKAP2-202ENST00000378034 TDHQ8IZJ6 230 aa14.74□□□□□ -0.05
CKAP2-202ENST00000378034 MCPH1Q8NEM0 835 aa14.74□□□□□ -0.05
CKAP2-202ENST00000378034 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.74□□□□□ -0.05
CKAP2-202ENST00000378034 MTIF3Q9H2K0 278 aaKnown RBP14.74□□□□□ -0.05
CKAP2-202ENST00000378034 BHMT2Q9H2M3 363 aa14.74□□□□□ -0.05
CKAP2-202ENST00000378034 SUCLA2Q9P2R7 463 aaPredicted RBP14.74□□□□□ -0.05
CKAP2-202ENST00000378034 CCDC39Q9UFE4 941 aa14.74□□□□□ -0.05
CKAP2-202ENST00000378034 COLQQ9Y215 455 aaPredicted RBP14.74□□□□□ -0.05
CKAP2-202ENST00000378034 A0A087WWV3 80 aa14.73□□□□□ -0.05
CKAP2-202ENST00000378034 GPR32O75388 356 aa14.73□□□□□ -0.05
CKAP2-202ENST00000378034 VTNP04004 478 aa14.73□□□□□ -0.05
CKAP2-202ENST00000378034 ACRP10323 421 aa14.73□□□□□ -0.05
CKAP2-202ENST00000378034 TMEM62Q0P6H9 643 aa14.73□□□□□ -0.05
CKAP2-202ENST00000378034 PLEKHG4Q58EX7 1191 aa14.73□□□□□ -0.05
CKAP2-202ENST00000378034 FBXO47Q5MNV8 452 aa14.73□□□□□ -0.05
CKAP2-202ENST00000378034 ODR4Q5SWX8 454 aa14.73□□□□□ -0.05
CKAP2-202ENST00000378034 PADI6Q6TGC4 694 aa14.73□□□□□ -0.05
CKAP2-202ENST00000378034 TSHZ1Q6ZSZ6 1077 aa14.73□□□□□ -0.05
CKAP2-202ENST00000378034 PSPC1Q8WXF1 523 aaKnown RBP14.73□□□□□ -0.05
CKAP2-202ENST00000378034 HERVK_113Q902F9 699 aa14.73□□□□□ -0.05
CKAP2-202ENST00000378034 APBB2Q92870 758 aa14.73□□□□□ -0.05
CKAP2-202ENST00000378034 CLIC6Q96NY7 704 aa14.73□□□□□ -0.05
CKAP2-202ENST00000378034 SCAND2PQ9GZW5 306 aaPredicted RBP14.73□□□□□ -0.05
CKAP2-202ENST00000378034 RBM19Q9Y4C8 960 aaKnown RBP14.73□□□□□ -0.05
CKAP2-202ENST00000378034 E9PMD0 336 aa14.73□□□□□ -0.05
CKAP2-202ENST00000378034 EFCAB14O75071 495 aa14.73□□□□□ -0.05
CKAP2-202ENST00000378034 BAIAP3O94812 1187 aa14.73□□□□□ -0.05
CKAP2-202ENST00000378034 CYP11B2P19099 503 aa14.73□□□□□ -0.05
CKAP2-202ENST00000378034 GPC3P51654 580 aa14.73□□□□□ -0.05
CKAP2-202ENST00000378034 NLRP11P59045 1033 aaKnown RBP14.73□□□□□ -0.05
CKAP2-202ENST00000378034 MXD4Q14582 209 aaPredicted RBP14.73□□□□□ -0.05
CKAP2-202ENST00000378034 ZRSR1Q15695 479 aaKnown RBP14.73□□□□□ -0.05
CKAP2-202ENST00000378034 ZNF410Q86VK4 478 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms