RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 GRB10Q13322 594 aa16.97■□□□□ 0.31
CSNK1A1-202ENST00000377843 FOXB2Q5VYV0 432 aa16.97■□□□□ 0.31
CSNK1A1-202ENST00000377843 TMEM154Q6P9G4 183 aa16.97■□□□□ 0.31
CSNK1A1-202ENST00000377843 OTUD6AQ7L8S5 288 aa16.97■□□□□ 0.31
CSNK1A1-202ENST00000377843 SPATA21Q7Z572 469 aa16.97■□□□□ 0.31
CSNK1A1-202ENST00000377843 NBPF5PQ86XG9 351 aaPredicted RBP16.97■□□□□ 0.31
CSNK1A1-202ENST00000377843 GBP7Q8N8V2 638 aaPredicted RBP16.97■□□□□ 0.31
CSNK1A1-202ENST00000377843 FAM210AQ96ND0 272 aa16.97■□□□□ 0.31
CSNK1A1-202ENST00000377843 FGFBP2Q9BYJ0 223 aa16.97■□□□□ 0.31
CSNK1A1-202ENST00000377843 ETNK1Q9HBU6 452 aa16.97■□□□□ 0.31
CSNK1A1-202ENST00000377843 PCMTD2Q9NV79 361 aa16.97■□□□□ 0.31
CSNK1A1-202ENST00000377843 RGL1Q9NZL6 768 aa16.97■□□□□ 0.31
CSNK1A1-202ENST00000377843 LMCD1Q9NZU5 365 aa16.97■□□□□ 0.31
CSNK1A1-202ENST00000377843 NAGPAQ9UK23 515 aa16.97■□□□□ 0.31
CSNK1A1-202ENST00000377843 FAM170AA1A519 330 aa16.97■□□□□ 0.31
CSNK1A1-202ENST00000377843 FGFR1OPO95684 399 aaKnown RBP16.97■□□□□ 0.31
CSNK1A1-202ENST00000377843 OR52Z1P0C646 297 aa16.97■□□□□ 0.31
CSNK1A1-202ENST00000377843 CALB2P22676 271 aa16.97■□□□□ 0.31
CSNK1A1-202ENST00000377843 ALDH3A1P30838 453 aa16.97■□□□□ 0.31
CSNK1A1-202ENST00000377843 MRPS35P82673 323 aaKnown RBP16.97■□□□□ 0.31
CSNK1A1-202ENST00000377843 DR1Q01658 176 aa16.97■□□□□ 0.31
CSNK1A1-202ENST00000377843 UCMAQ8WVF2 138 aa16.97■□□□□ 0.31
CSNK1A1-202ENST00000377843 ARL2BPQ9Y2Y0 163 aa16.97■□□□□ 0.31
CSNK1A1-202ENST00000377843 RPS6KL1Q9Y6S9 549 aa16.97■□□□□ 0.31
CSNK1A1-202ENST00000377843 MYH4Q9Y623 1939 aa16.97■□□□□ 0.31
CSNK1A1-202ENST00000377843 SMAPO00193 183 aa16.96■□□□□ 0.31
CSNK1A1-202ENST00000377843 PTENP60484 403 aa16.96■□□□□ 0.31
CSNK1A1-202ENST00000377843 AMPD3Q01432 767 aa16.96■□□□□ 0.31
CSNK1A1-202ENST00000377843 ZCWPW2Q504Y3 356 aa16.96■□□□□ 0.31
CSNK1A1-202ENST00000377843 C6orf118Q5T5N4 469 aa16.96■□□□□ 0.31
CSNK1A1-202ENST00000377843 ANKRD27Q96NW4 1050 aa16.96■□□□□ 0.31
CSNK1A1-202ENST00000377843 GORASP1Q9BQQ3 440 aa16.96■□□□□ 0.31
CSNK1A1-202ENST00000377843 GRHL1Q9NZI5 618 aa16.96■□□□□ 0.31
CSNK1A1-202ENST00000377843 SUCLA2Q9P2R7 463 aaPredicted RBP16.96■□□□□ 0.31
CSNK1A1-202ENST00000377843 ZBTB12Q9Y330 459 aaPredicted RBP16.96■□□□□ 0.31
CSNK1A1-202ENST00000377843 ERVV-2B6SEH9 535 aa16.96■□□□□ 0.31
CSNK1A1-202ENST00000377843 KIAA0391O15091 583 aaKnown RBP16.96■□□□□ 0.31
CSNK1A1-202ENST00000377843 LGR5O75473 907 aa16.96■□□□□ 0.31
CSNK1A1-202ENST00000377843 GH1P01241 217 aa16.96■□□□□ 0.31
CSNK1A1-202ENST00000377843 PEX5P50542 639 aa16.96■□□□□ 0.31
CSNK1A1-202ENST00000377843 LBRQ14739 615 aaKnown RBP16.96■□□□□ 0.31
CSNK1A1-202ENST00000377843 SGSM1Q2NKQ1 1148 aa16.96■□□□□ 0.31
CSNK1A1-202ENST00000377843 SUPT20HQ8NEM7 779 aa16.96■□□□□ 0.31
CSNK1A1-202ENST00000377843 HES6Q96HZ4 224 aa16.96■□□□□ 0.31
CSNK1A1-202ENST00000377843 AK8Q96MA6 479 aa16.96■□□□□ 0.31
CSNK1A1-202ENST00000377843 PNMA5Q96PV4 448 aa16.96■□□□□ 0.31
CSNK1A1-202ENST00000377843 MAGEB6P1A0A0J9YX57 407 aa16.95■□□□□ 0.3
CSNK1A1-202ENST00000377843 FLOT1O75955 427 aa16.95■□□□□ 0.3
CSNK1A1-202ENST00000377843 UNC5CO95185 931 aa16.95■□□□□ 0.3
CSNK1A1-202ENST00000377843 NKX1-1Q15270 411 aaPredicted RBP16.95■□□□□ 0.3
CSNK1A1-202ENST00000377843 LETM2Q2VYF4 491 aa16.95■□□□□ 0.3
CSNK1A1-202ENST00000377843 DPY19L2P1Q6NXN4 242 aa16.95■□□□□ 0.3
CSNK1A1-202ENST00000377843 ALKBH5Q6P6C2 394 aaKnown RBP16.95■□□□□ 0.3
CSNK1A1-202ENST00000377843 VSTM1Q6UX27 236 aa16.95■□□□□ 0.3
CSNK1A1-202ENST00000377843 SV2BQ7L1I2 683 aa16.95■□□□□ 0.3
CSNK1A1-202ENST00000377843 ECHDC2Q86YB7 292 aa16.95■□□□□ 0.3
CSNK1A1-202ENST00000377843 DYDC1Q8WWB3 177 aa16.95■□□□□ 0.3
CSNK1A1-202ENST00000377843 IFT43Q96FT9 208 aa16.95■□□□□ 0.3
CSNK1A1-202ENST00000377843 PLCD4Q9BRC7 762 aa16.95■□□□□ 0.3
CSNK1A1-202ENST00000377843 RIOK1Q9BRS2 568 aaKnown RBP16.95■□□□□ 0.3
CSNK1A1-202ENST00000377843 DLGAP2Q9P1A6 1054 aa16.95■□□□□ 0.3
CSNK1A1-202ENST00000377843 DAAM1Q9Y4D1 1078 aa16.95■□□□□ 0.3
CSNK1A1-202ENST00000377843 PLCH1Q4KWH8 1693 aa16.95■□□□□ 0.3
CSNK1A1-202ENST00000377843 KCPQ6ZWJ8 1503 aa16.95■□□□□ 0.3
CSNK1A1-202ENST00000377843 COL16A1Q07092 1604 aaPredicted RBP16.95■□□□□ 0.3
CSNK1A1-202ENST00000377843 BCL9O00512 1426 aa16.95■□□□□ 0.3
CSNK1A1-202ENST00000377843 TRAF5O00463 557 aa16.95■□□□□ 0.3
CSNK1A1-202ENST00000377843 IRS4O14654 1257 aaPredicted RBP16.95■□□□□ 0.3
CSNK1A1-202ENST00000377843 FGRP09769 529 aa16.95■□□□□ 0.3
CSNK1A1-202ENST00000377843 SLC5A1P13866 664 aa16.95■□□□□ 0.3
CSNK1A1-202ENST00000377843 CNGA1P29973 690 aa16.95■□□□□ 0.3
CSNK1A1-202ENST00000377843 MPP2Q14168 576 aa16.95■□□□□ 0.3
CSNK1A1-202ENST00000377843 FAM182BQ5T319 152 aa16.95■□□□□ 0.3
CSNK1A1-202ENST00000377843 SOGA3Q5TF21 947 aa16.95■□□□□ 0.3
CSNK1A1-202ENST00000377843 OR52E8Q6IFG1 317 aa16.95■□□□□ 0.3
CSNK1A1-202ENST00000377843 BARGINQ6ZT62 677 aa16.95■□□□□ 0.3
CSNK1A1-202ENST00000377843 NLRP10Q86W26 655 aa16.95■□□□□ 0.3
CSNK1A1-202ENST00000377843 LONP2Q86WA8 852 aa16.95■□□□□ 0.3
CSNK1A1-202ENST00000377843 DNAJC10Q8IXB1 793 aa16.95■□□□□ 0.3
CSNK1A1-202ENST00000377843 LMNTD2Q8IXW0 634 aa16.95■□□□□ 0.3
CSNK1A1-202ENST00000377843 RPUSD2Q8IZ73 545 aaKnown RBP16.95■□□□□ 0.3
CSNK1A1-202ENST00000377843 GDAP1Q8TB36 358 aa16.95■□□□□ 0.3
CSNK1A1-202ENST00000377843 STK32AQ8WU08 396 aa16.95■□□□□ 0.3
CSNK1A1-202ENST00000377843 TMEM237Q96Q45 408 aa16.95■□□□□ 0.3
CSNK1A1-202ENST00000377843 CYP39A1Q9NYL5 469 aa16.95■□□□□ 0.3
CSNK1A1-202ENST00000377843 PHLPP1O60346 1717 aa16.94■□□□□ 0.3
CSNK1A1-202ENST00000377843 TMEM120BA0PK00 339 aa16.94■□□□□ 0.3
CSNK1A1-202ENST00000377843 O00370 1275 aa16.94■□□□□ 0.3
CSNK1A1-202ENST00000377843 CCNT1O60563 726 aaKnown RBP16.94■□□□□ 0.3
CSNK1A1-202ENST00000377843 USP4Q13107 963 aa16.94■□□□□ 0.3
CSNK1A1-202ENST00000377843 PRPF4BQ13523 1007 aaKnown RBP16.94■□□□□ 0.3
CSNK1A1-202ENST00000377843 JAMLQ86YT9 394 aa16.94■□□□□ 0.3
CSNK1A1-202ENST00000377843 RBM46Q8TBY0 533 aaKnown RBP16.94■□□□□ 0.3
CSNK1A1-202ENST00000377843 NENFQ9UMX5 172 aa16.94■□□□□ 0.3
CSNK1A1-202ENST00000377843 G3BP2Q9UN86 482 aaKnown RBP16.94■□□□□ 0.3
CSNK1A1-202ENST00000377843 PVALEFA0A1B0GWK0 134 aa16.94■□□□□ 0.3
CSNK1A1-202ENST00000377843 H0Y3Z8 333 aa16.94■□□□□ 0.3
CSNK1A1-202ENST00000377843 LAD1O00515 517 aa16.94■□□□□ 0.3
CSNK1A1-202ENST00000377843 PYGBP11216 843 aa16.94■□□□□ 0.3
CSNK1A1-202ENST00000377843 GBP1P32455 592 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms