RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 LINC01465Q8N7H1 131 aa18.89■□□□□ 0.61
HMGN4-201ENST00000377575 PPM1EQ8WY54 764 aa18.89■□□□□ 0.61
HMGN4-201ENST00000377575 SAMD11Q96NU1 681 aa18.89■□□□□ 0.61
HMGN4-201ENST00000377575 PPP1R16BQ96T49 567 aa18.89■□□□□ 0.61
HMGN4-201ENST00000377575 OSMRQ99650 979 aa18.89■□□□□ 0.61
HMGN4-201ENST00000377575 NIFKQ9BYG3 293 aaKnown RBP18.89■□□□□ 0.61
HMGN4-201ENST00000377575 TSPYL2Q9H2G4 693 aaPredicted RBP18.89■□□□□ 0.61
HMGN4-201ENST00000377575 MTUS1Q9ULD2 1270 aa18.89■□□□□ 0.61
HMGN4-201ENST00000377575 RFXAPO00287 272 aa18.88■□□□□ 0.61
HMGN4-201ENST00000377575 EML1O00423 815 aa18.88■□□□□ 0.61
HMGN4-201ENST00000377575 GPR182O15218 404 aa18.88■□□□□ 0.61
HMGN4-201ENST00000377575 NEMFO60524 1076 aa18.88■□□□□ 0.61
HMGN4-201ENST00000377575 GPR32O75388 356 aa18.88■□□□□ 0.61
HMGN4-201ENST00000377575 P4HBP07237 508 aaKnown RBP18.88■□□□□ 0.61
HMGN4-201ENST00000377575 QARSP47897 775 aaKnown RBP18.88■□□□□ 0.61
HMGN4-201ENST00000377575 GUCY1B3Q02153 619 aa18.88■□□□□ 0.61
HMGN4-201ENST00000377575 NFX1Q12986 1120 aaKnown RBP18.88■□□□□ 0.61
HMGN4-201ENST00000377575 TARBP2Q15633 366 aaKnown RBP18.88■□□□□ 0.61
HMGN4-201ENST00000377575 CALCRLQ16602 461 aa18.88■□□□□ 0.61
HMGN4-201ENST00000377575 TMEM266Q2M3C6 531 aa18.88■□□□□ 0.61
HMGN4-201ENST00000377575 SPRED2Q7Z698 418 aa18.88■□□□□ 0.61
HMGN4-201ENST00000377575 GDPD5Q8WTR4 605 aa18.88■□□□□ 0.61
HMGN4-201ENST00000377575 LINC01599Q8WXQ3 324 aa18.88■□□□□ 0.61
HMGN4-201ENST00000377575 SUGCTQ9HAC7 445 aa18.88■□□□□ 0.61
HMGN4-201ENST00000377575 ERVK-5Q9HDB9 667 aa18.88■□□□□ 0.61
HMGN4-201ENST00000377575 PRRC2BQ5JSZ5 2229 aaKnown RBP18.88■□□□□ 0.61
HMGN4-201ENST00000377575 DDX11L8A8MPP1 907 aa18.87■□□□□ 0.61
HMGN4-201ENST00000377575 GRB10Q13322 594 aa18.87■□□□□ 0.61
HMGN4-201ENST00000377575 GNL2Q13823 731 aaKnown RBP18.87■□□□□ 0.61
HMGN4-201ENST00000377575 EPHA7Q15375 998 aa18.87■□□□□ 0.61
HMGN4-201ENST00000377575 CCDC85BQ15834 202 aaPredicted RBP18.87■□□□□ 0.61
HMGN4-201ENST00000377575 NCAPH2Q6IBW4 605 aa18.87■□□□□ 0.61
HMGN4-201ENST00000377575 NPAS4Q8IUM7 802 aa18.87■□□□□ 0.61
HMGN4-201ENST00000377575 ADGRA3Q8IWK6 1321 aa18.87■□□□□ 0.61
HMGN4-201ENST00000377575 FBXO22Q8NEZ5 403 aa18.87■□□□□ 0.61
HMGN4-201ENST00000377575 TMEM40Q8WWA1 233 aa18.87■□□□□ 0.61
HMGN4-201ENST00000377575 SCLT1Q96NL6 688 aa18.87■□□□□ 0.61
HMGN4-201ENST00000377575 JPH2Q9BR39 696 aaPredicted RBP18.87■□□□□ 0.61
HMGN4-201ENST00000377575 KIAA1671Q9BY89 1806 aa18.87■□□□□ 0.61
HMGN4-201ENST00000377575 FOXP1Q9H334 677 aaPredicted RBP18.87■□□□□ 0.61
HMGN4-201ENST00000377575 NOC2LQ9Y3T9 749 aaKnown RBP18.87■□□□□ 0.61
HMGN4-201ENST00000377575 KIF3AQ9Y496 699 aa18.87■□□□□ 0.61
HMGN4-201ENST00000377575 MTCH2Q9Y6C9 303 aa18.87■□□□□ 0.61
HMGN4-201ENST00000377575 DENND3A2RUS2 1198 aa18.86■□□□□ 0.61
HMGN4-201ENST00000377575 STAG3L1P0CL83 205 aa18.86■□□□□ 0.61
HMGN4-201ENST00000377575 DNM2P50570 870 aa18.86■□□□□ 0.61
HMGN4-201ENST00000377575 NLRP11P59045 1033 aaKnown RBP18.86■□□□□ 0.61
HMGN4-201ENST00000377575 CDC42EP1Q00587 391 aa18.86■□□□□ 0.61
HMGN4-201ENST00000377575 FIBCD1Q8N539 461 aa18.86■□□□□ 0.61
HMGN4-201ENST00000377575 FBXO18Q8NFZ0 1043 aa18.86■□□□□ 0.61
HMGN4-201ENST00000377575 LXNQ9BS40 222 aa18.86■□□□□ 0.61
HMGN4-201ENST00000377575 C17orf80Q9BSJ5 609 aa18.86■□□□□ 0.61
HMGN4-201ENST00000377575 TMX1Q9H3N1 280 aa18.86■□□□□ 0.61
HMGN4-201ENST00000377575 CDHR5Q9HBB8 845 aa18.86■□□□□ 0.61
HMGN4-201ENST00000377575 C1orf112Q9NSG2 853 aa18.86■□□□□ 0.61
HMGN4-201ENST00000377575 PCDHA12Q9UN75 941 aa18.86■□□□□ 0.61
HMGN4-201ENST00000377575 ST3GAL5Q9UNP4 418 aa18.86■□□□□ 0.61
HMGN4-201ENST00000377575 RWDD3Q9Y3V2 267 aa18.86■□□□□ 0.61
HMGN4-201ENST00000377575 PPME1Q9Y570 386 aa18.86■□□□□ 0.61
HMGN4-201ENST00000377575 TMEM150BA6NC51 233 aa18.85■□□□□ 0.61
HMGN4-201ENST00000377575 LPXNO60711 386 aa18.85■□□□□ 0.61
HMGN4-201ENST00000377575 STBD1O95210 358 aa18.85■□□□□ 0.61
HMGN4-201ENST00000377575 GPC3P51654 580 aa18.85■□□□□ 0.61
HMGN4-201ENST00000377575 SPIRE1Q08AE8 756 aa18.85■□□□□ 0.61
HMGN4-201ENST00000377575 ANO5Q75V66 913 aa18.85■□□□□ 0.61
HMGN4-201ENST00000377575 FAM228AQ86W67 206 aa18.85■□□□□ 0.61
HMGN4-201ENST00000377575 EXOC8Q8IYI6 725 aa18.85■□□□□ 0.61
HMGN4-201ENST00000377575 RC3H2Q9HBD1 1191 aaKnown RBP18.85■□□□□ 0.61
HMGN4-201ENST00000377575 LMCD1Q9NZU5 365 aa18.85■□□□□ 0.61
HMGN4-201ENST00000377575 LRFN2Q9ULH4 789 aa18.85■□□□□ 0.61
HMGN4-201ENST00000377575 REV3LO60673 3130 aa18.85■□□□□ 0.61
HMGN4-201ENST00000377575 A0A0C4DFX4 3053 aa18.85■□□□□ 0.61
HMGN4-201ENST00000377575 FNDC1Q4ZHG4 1894 aaPredicted RBP18.84■□□□□ 0.61
HMGN4-201ENST00000377575 IGKV6-21A0A0C4DH24 114 aa18.84■□□□□ 0.61
HMGN4-201ENST00000377575 MAFO75444 373 aaPredicted RBP18.84■□□□□ 0.61
HMGN4-201ENST00000377575 SARSP49591 514 aaKnown RBP18.84■□□□□ 0.61
HMGN4-201ENST00000377575 MCM2P49736 904 aa18.84■□□□□ 0.61
HMGN4-201ENST00000377575 ORC2Q13416 577 aaPredicted RBP18.84■□□□□ 0.61
HMGN4-201ENST00000377575 EPC2Q52LR7 807 aa18.84■□□□□ 0.61
HMGN4-201ENST00000377575 PLA2G4FQ68DD2 849 aa18.84■□□□□ 0.61
HMGN4-201ENST00000377575 RTN4RL1Q86UN2 441 aaPredicted RBP18.84■□□□□ 0.61
HMGN4-201ENST00000377575 C4orf19Q8IY42 314 aa18.84■□□□□ 0.61
HMGN4-201ENST00000377575 NEK9Q8TD19 979 aa18.84■□□□□ 0.61
HMGN4-201ENST00000377575 NLRP7Q8WX94 980 aa18.84■□□□□ 0.61
HMGN4-201ENST00000377575 SLC7A3Q8WY07 619 aa18.84■□□□□ 0.61
HMGN4-201ENST00000377575 TBC1D32Q96NH3 1257 aa18.84■□□□□ 0.61
HMGN4-201ENST00000377575 CEP89Q96ST8 783 aa18.84■□□□□ 0.61
HMGN4-201ENST00000377575 ADAMTS10Q9H324 1103 aa18.84■□□□□ 0.61
HMGN4-201ENST00000377575 ZSWIM4Q9H7M6 989 aa18.84■□□□□ 0.61
HMGN4-201ENST00000377575 TTC12Q9H892 705 aaPredicted RBP18.84■□□□□ 0.61
HMGN4-201ENST00000377575 CYP26B1Q9NR63 512 aa18.84■□□□□ 0.61
HMGN4-201ENST00000377575 THEGQ9P2T0 379 aa18.84■□□□□ 0.61
HMGN4-201ENST00000377575 WNT7AO00755 349 aa18.83■□□□□ 0.6
HMGN4-201ENST00000377575 DGKIO75912 1065 aa18.83■□□□□ 0.6
HMGN4-201ENST00000377575 EIF4BP23588 611 aaKnown RBP18.83■□□□□ 0.6
HMGN4-201ENST00000377575 YWHABP31946 246 aaKnown RBP18.83■□□□□ 0.6
HMGN4-201ENST00000377575 MCM7P33993 719 aa18.83■□□□□ 0.6
HMGN4-201ENST00000377575 BTG3Q14201 252 aaPredicted RBP18.83■□□□□ 0.6
HMGN4-201ENST00000377575 OTUD6AQ7L8S5 288 aa18.83■□□□□ 0.6
HMGN4-201ENST00000377575 NOSTRINQ8IVI9 506 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms