RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 CEP57Q86XR8 500 aa19.28■□□□□ 0.68
CLSTN1-202ENST00000377298 TAB3Q8N5C8 712 aaPredicted RBP19.28■□□□□ 0.68
CLSTN1-202ENST00000377298 KCTD6Q8NC69 237 aa19.28■□□□□ 0.68
CLSTN1-202ENST00000377298 CCNYQ8ND76 341 aa19.28■□□□□ 0.68
CLSTN1-202ENST00000377298 AGBL3Q8NEM8 1001 aa19.28■□□□□ 0.68
CLSTN1-202ENST00000377298 MGARPQ8TDB4 240 aa19.28■□□□□ 0.68
CLSTN1-202ENST00000377298 MKRN1Q9UHC7 482 aaKnown RBP19.28■□□□□ 0.68
CLSTN1-202ENST00000377298 ELF1P32519 619 aa19.27■□□□□ 0.68
CLSTN1-202ENST00000377298 MAP3K14Q99558 947 aa19.27■□□□□ 0.68
CLSTN1-202ENST00000377298 NCAPGQ9BPX3 1015 aa19.27■□□□□ 0.68
CLSTN1-202ENST00000377298 CALN1Q9BXU9 219 aa19.27■□□□□ 0.68
CLSTN1-202ENST00000377298 CSPG5O95196 566 aa19.27■□□□□ 0.68
CLSTN1-202ENST00000377298 EYA4O95677 639 aa19.27■□□□□ 0.68
CLSTN1-202ENST00000377298 ATP11AP98196 1134 aa19.27■□□□□ 0.68
CLSTN1-202ENST00000377298 CYP27A1Q02318 531 aa19.27■□□□□ 0.68
CLSTN1-202ENST00000377298 FAM213AQ9BRX8 229 aa19.27■□□□□ 0.68
CLSTN1-202ENST00000377298 MUM1L1Q5H9M0 696 aa19.27■□□□□ 0.68
CLSTN1-202ENST00000377298 MRPL4Q9BYD3 311 aaKnown RBP19.27■□□□□ 0.68
CLSTN1-202ENST00000377298 POLR3FQ9H1D9 316 aaPredicted RBP19.27■□□□□ 0.68
CLSTN1-202ENST00000377298 MED4Q9NPJ6 270 aa19.27■□□□□ 0.68
CLSTN1-202ENST00000377298 ARHGAP25P42331 645 aa19.27■□□□□ 0.67
CLSTN1-202ENST00000377298 KCNH2Q12809 1159 aa19.27■□□□□ 0.67
CLSTN1-202ENST00000377298 PLCB4Q15147 1175 aa19.27■□□□□ 0.67
CLSTN1-202ENST00000377298 ANGEL2Q5VTE6 544 aaKnown RBP19.27■□□□□ 0.67
CLSTN1-202ENST00000377298 TMEM35BQ8NCS4 154 aa19.27■□□□□ 0.67
CLSTN1-202ENST00000377298 BEST2Q8NFU1 509 aa19.27■□□□□ 0.67
CLSTN1-202ENST00000377298 EPB41L4AQ9HCS5 686 aaPredicted RBP19.27■□□□□ 0.67
CLSTN1-202ENST00000377298 LRRD1A4D1F6 860 aa19.26■□□□□ 0.67
CLSTN1-202ENST00000377298 PPP4CP60510 307 aa19.26■□□□□ 0.67
CLSTN1-202ENST00000377298 ELMSAN1Q6PJG2 1045 aa19.26■□□□□ 0.67
CLSTN1-202ENST00000377298 RHPN2Q8IUC4 686 aa19.26■□□□□ 0.67
CLSTN1-202ENST00000377298 ZBED2Q9BTP6 218 aa19.26■□□□□ 0.67
CLSTN1-202ENST00000377298 CCSER1Q9C0I3 900 aa19.26■□□□□ 0.67
CLSTN1-202ENST00000377298 REREQ9P2R6 1566 aa19.26■□□□□ 0.67
CLSTN1-202ENST00000377298 PP2D1A8MPX8 630 aa19.26■□□□□ 0.67
CLSTN1-202ENST00000377298 GCLMP48507 274 aa19.26■□□□□ 0.67
CLSTN1-202ENST00000377298 JPH1Q9HDC5 661 aaPredicted RBP19.26■□□□□ 0.67
CLSTN1-202ENST00000377298 GPC3P51654 580 aa19.26■□□□□ 0.67
CLSTN1-202ENST00000377298 ZNF699Q32M78 642 aa19.26■□□□□ 0.67
CLSTN1-202ENST00000377298 ARL13BQ3SXY8 428 aa19.26■□□□□ 0.67
CLSTN1-202ENST00000377298 SHC4Q6S5L8 630 aa19.26■□□□□ 0.67
CLSTN1-202ENST00000377298 THEM5Q8N1Q8 247 aa19.26■□□□□ 0.67
CLSTN1-202ENST00000377298 RILPQ96NA2 401 aa19.26■□□□□ 0.67
CLSTN1-202ENST00000377298 TIPINQ9BVW5 301 aa19.26■□□□□ 0.67
CLSTN1-202ENST00000377298 HEXIM1O94992 359 aaKnown RBP19.26■□□□□ 0.67
CLSTN1-202ENST00000377298 SMARCA1P28370 1054 aa19.26■□□□□ 0.67
CLSTN1-202ENST00000377298 DMTNQ08495 405 aa19.26■□□□□ 0.67
CLSTN1-202ENST00000377298 MST1RQ04912 1400 aa19.25■□□□□ 0.67
CLSTN1-202ENST00000377298 TBX3O15119 743 aa19.25■□□□□ 0.67
CLSTN1-202ENST00000377298 GMPSP49915 693 aaPredicted RBP19.25■□□□□ 0.67
CLSTN1-202ENST00000377298 GCOM2Q9BZD3 368 aaPredicted RBP19.25■□□□□ 0.67
CLSTN1-202ENST00000377298 MYOZ2Q9NPC6 264 aa19.25■□□□□ 0.67
CLSTN1-202ENST00000377298 GGA3Q9NZ52 723 aa19.25■□□□□ 0.67
CLSTN1-202ENST00000377298 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.25■□□□□ 0.67
CLSTN1-202ENST00000377298 LCMT1Q9UIC8 334 aa19.25■□□□□ 0.67
CLSTN1-202ENST00000377298 IQGAP1P46940 1657 aa19.25■□□□□ 0.67
CLSTN1-202ENST00000377298 VAMP7P51809 220 aa19.25■□□□□ 0.67
CLSTN1-202ENST00000377298 KCNB1Q14721 858 aa19.25■□□□□ 0.67
CLSTN1-202ENST00000377298 ANAPC5Q9UJX4 755 aa19.25■□□□□ 0.67
CLSTN1-202ENST00000377298 INHBAP08476 426 aa19.25■□□□□ 0.67
CLSTN1-202ENST00000377298 TBXAS1P24557 533 aaPredicted RBP19.25■□□□□ 0.67
CLSTN1-202ENST00000377298 EPHB4P54760 987 aa19.25■□□□□ 0.67
CLSTN1-202ENST00000377298 ZSCAN26Q16670 478 aa19.25■□□□□ 0.67
CLSTN1-202ENST00000377298 GTF3C2Q8WUA4 911 aaPredicted RBP19.25■□□□□ 0.67
CLSTN1-202ENST00000377298 HUS1O60921 280 aa19.24■□□□□ 0.67
CLSTN1-202ENST00000377298 INPP5BP32019 993 aa19.24■□□□□ 0.67
CLSTN1-202ENST00000377298 SNAPC2Q13487 334 aa19.24■□□□□ 0.67
CLSTN1-202ENST00000377298 TTC39CQ8N584 583 aa19.24■□□□□ 0.67
CLSTN1-202ENST00000377298 CALR3Q96L12 384 aaKnown RBP19.24■□□□□ 0.67
CLSTN1-202ENST00000377298 PRR12Q9ULL5 1215 aa19.24■□□□□ 0.67
CLSTN1-202ENST00000377298 SLC26A4O43511 780 aa19.24■□□□□ 0.67
CLSTN1-202ENST00000377298 PRR29P0C7W0 189 aa19.24■□□□□ 0.67
CLSTN1-202ENST00000377298 PDHBP11177 359 aa19.24■□□□□ 0.67
CLSTN1-202ENST00000377298 ACTN1P12814 892 aa19.24■□□□□ 0.67
CLSTN1-202ENST00000377298 GYS1P13807 737 aa19.24■□□□□ 0.67
CLSTN1-202ENST00000377298 XPAP23025 273 aaPredicted RBP19.24■□□□□ 0.67
CLSTN1-202ENST00000377298 UHMK1Q8TAS1 419 aaKnown RBP19.24■□□□□ 0.67
CLSTN1-202ENST00000377298 ADAM22Q9P0K1 906 aa19.24■□□□□ 0.67
CLSTN1-202ENST00000377298 ITSN1Q15811 1721 aa19.24■□□□□ 0.67
CLSTN1-202ENST00000377298 TNPO2O14787 897 aaKnown RBP19.24■□□□□ 0.67
CLSTN1-202ENST00000377298 EFNA5P52803 228 aa19.24■□□□□ 0.67
CLSTN1-202ENST00000377298 RWDD2BP57060 319 aa19.24■□□□□ 0.67
CLSTN1-202ENST00000377298 DARS2Q6PI48 645 aaKnown RBP19.24■□□□□ 0.67
CLSTN1-202ENST00000377298 GINM1Q9NU53 330 aa19.24■□□□□ 0.67
CLSTN1-202ENST00000377298 FBXO2Q9UK22 296 aaPredicted RBP19.24■□□□□ 0.67
CLSTN1-202ENST00000377298 EPB41L5Q9HCM4 733 aa19.24■□□□□ 0.67
CLSTN1-202ENST00000377298 SNX1Q13596 522 aa19.23■□□□□ 0.67
CLSTN1-202ENST00000377298 BAATQ14032 418 aaPredicted RBP19.23■□□□□ 0.67
CLSTN1-202ENST00000377298 EZH2Q15910 746 aaKnown RBP19.23■□□□□ 0.67
CLSTN1-202ENST00000377298 ARHGEF18Q6ZSZ5 1173 aa19.23■□□□□ 0.67
CLSTN1-202ENST00000377298 BZW1Q7L1Q6 419 aaKnown RBP19.23■□□□□ 0.67
CLSTN1-202ENST00000377298 MICAL1Q8TDZ2 1067 aa19.23■□□□□ 0.67
CLSTN1-202ENST00000377298 HGSO14964 777 aaPredicted RBP19.23■□□□□ 0.67
CLSTN1-202ENST00000377298 TXNP10599 105 aaKnown RBP19.23■□□□□ 0.67
CLSTN1-202ENST00000377298 STAT5BP51692 787 aa19.23■□□□□ 0.67
CLSTN1-202ENST00000377298 SCYL1Q96KG9 808 aa19.23■□□□□ 0.67
CLSTN1-202ENST00000377298 RABEP2Q9H5N1 569 aa19.23■□□□□ 0.67
CLSTN1-202ENST00000377298 MEGF6O75095 1541 aa19.23■□□□□ 0.67
CLSTN1-202ENST00000377298 PPARDQ03181 441 aa19.23■□□□□ 0.67
CLSTN1-202ENST00000377298 MAP7Q14244 749 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms