RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 LIMA1Q9UHB6 759 aaKnown RBP16.82■□□□□ 0.28
FXN-201ENST00000377270 ANO9A1A5B4 782 aa16.82■□□□□ 0.28
FXN-201ENST00000377270 OR52Z1P0C646 297 aa16.82■□□□□ 0.28
FXN-201ENST00000377270 OXCT1P55809 520 aa16.82■□□□□ 0.28
FXN-201ENST00000377270 PHEXP78562 749 aa16.82■□□□□ 0.28
FXN-201ENST00000377270 LBRQ14739 615 aaKnown RBP16.82■□□□□ 0.28
FXN-201ENST00000377270 ZNF394Q53GI3 561 aa16.82■□□□□ 0.28
FXN-201ENST00000377270 SEPT14Q6ZU15 432 aa16.82■□□□□ 0.28
FXN-201ENST00000377270 NEK8Q86SG6 692 aa16.82■□□□□ 0.28
FXN-201ENST00000377270 LRRC47Q8N1G4 583 aaKnown RBP16.82■□□□□ 0.28
FXN-201ENST00000377270 CERS5Q8N5B7 392 aa16.82■□□□□ 0.28
FXN-201ENST00000377270 DDX4Q9NQI0 724 aaKnown RBP16.82■□□□□ 0.28
FXN-201ENST00000377270 SPO11Q9Y5K1 396 aa16.82■□□□□ 0.28
FXN-201ENST00000377270 AKR1B1P15121 316 aa16.81■□□□□ 0.28
FXN-201ENST00000377270 YY1P25490 414 aa16.81■□□□□ 0.28
FXN-201ENST00000377270 USP46P62068 366 aa16.81■□□□□ 0.28
FXN-201ENST00000377270 HERVK_113P62684 666 aa16.81■□□□□ 0.28
FXN-201ENST00000377270 DPP8Q6V1X1 898 aaPredicted RBP16.81■□□□□ 0.28
FXN-201ENST00000377270 ZNF662Q6ZS27 426 aa16.81■□□□□ 0.28
FXN-201ENST00000377270 CABP7Q86V35 215 aa16.81■□□□□ 0.28
FXN-201ENST00000377270 CCDC63Q8NA47 563 aa16.81■□□□□ 0.28
FXN-201ENST00000377270 ERMNQ8TAM6 284 aa16.81■□□□□ 0.28
FXN-201ENST00000377270 TBCKQ8TEA7 893 aa16.81■□□□□ 0.28
FXN-201ENST00000377270 CAVIN3Q969G5 261 aa16.81■□□□□ 0.28
FXN-201ENST00000377270 DMAP1Q9NPF5 467 aaPredicted RBP16.81■□□□□ 0.28
FXN-201ENST00000377270 USP40Q9NVE5 1235 aa16.81■□□□□ 0.28
FXN-201ENST00000377270 TAB2Q9NYJ8 693 aa16.81■□□□□ 0.28
FXN-201ENST00000377270 DMGDHQ9UI17 866 aaKnown RBP16.81■□□□□ 0.28
FXN-201ENST00000377270 KCNJ18B7U540 433 aa16.81■□□□□ 0.28
FXN-201ENST00000377270 ABLIM1O14639 778 aa16.81■□□□□ 0.28
FXN-201ENST00000377270 KRT86O43790 486 aa16.81■□□□□ 0.28
FXN-201ENST00000377270 SCNN1DP51172 638 aa16.81■□□□□ 0.28
FXN-201ENST00000377270 GABPAQ06546 454 aa16.81■□□□□ 0.28
FXN-201ENST00000377270 KCNJ12Q14500 433 aa16.81■□□□□ 0.28
FXN-201ENST00000377270 TCP11X2Q5H9J9 407 aa16.81■□□□□ 0.28
FXN-201ENST00000377270 TTC30AQ86WT1 665 aa16.81■□□□□ 0.28
FXN-201ENST00000377270 CLEC10AQ8IUN9 316 aa16.81■□□□□ 0.28
FXN-201ENST00000377270 ZIM3Q96PE6 472 aa16.81■□□□□ 0.28
FXN-201ENST00000377270 DUSP9Q99956 384 aaKnown RBP16.81■□□□□ 0.28
FXN-201ENST00000377270 LRRC1Q9BTT6 524 aa16.81■□□□□ 0.28
FXN-201ENST00000377270 RIOX1Q9H6W3 641 aa16.81■□□□□ 0.28
FXN-201ENST00000377270 ARHGEF10LQ9HCE6 1279 aa16.81■□□□□ 0.28
FXN-201ENST00000377270 JADE2Q9NQC1 790 aa16.81■□□□□ 0.28
FXN-201ENST00000377270 KBTBD4Q9NVX7 518 aa16.81■□□□□ 0.28
FXN-201ENST00000377270 TMEM260Q9NX78 707 aa16.81■□□□□ 0.28
FXN-201ENST00000377270 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.8■□□□□ 0.28
FXN-201ENST00000377270 COPB1P53618 953 aaKnown RBP16.8■□□□□ 0.28
FXN-201ENST00000377270 SPAG1Q07617 926 aa16.8■□□□□ 0.28
FXN-201ENST00000377270 EZH2Q15910 746 aaKnown RBP16.8■□□□□ 0.28
FXN-201ENST00000377270 SGSM1Q2NKQ1 1148 aa16.8■□□□□ 0.28
FXN-201ENST00000377270 EXOC3L1Q86VI1 746 aa16.8■□□□□ 0.28
FXN-201ENST00000377270 PALB2Q86YC2 1186 aa16.8■□□□□ 0.28
FXN-201ENST00000377270 ADSSL1Q8N142 457 aa16.8■□□□□ 0.28
FXN-201ENST00000377270 REXO1Q8N1G1 1221 aaKnown RBP16.8■□□□□ 0.28
FXN-201ENST00000377270 PPANQ9NQ55 473 aaKnown RBP16.8■□□□□ 0.28
FXN-201ENST00000377270 TFR2Q9UP52 801 aa16.8■□□□□ 0.28
FXN-201ENST00000377270 SRRM3A6NNA2 597 aaPredicted RBP16.8■□□□□ 0.28
FXN-201ENST00000377270 PPIP5K2O43314 1243 aa16.8■□□□□ 0.28
FXN-201ENST00000377270 PDHA1P08559 390 aa16.8■□□□□ 0.28
FXN-201ENST00000377270 SRGNP10124 158 aa16.8■□□□□ 0.28
FXN-201ENST00000377270 PLCG1P19174 1290 aa16.8■□□□□ 0.28
FXN-201ENST00000377270 HOXD12P35452 270 aa16.8■□□□□ 0.28
FXN-201ENST00000377270 TECP42680 631 aa16.8■□□□□ 0.28
FXN-201ENST00000377270 KRT83P78385 493 aa16.8■□□□□ 0.28
FXN-201ENST00000377270 RBM26Q5T8P6 1007 aaKnown RBP16.8■□□□□ 0.28
FXN-201ENST00000377270 CEP128Q6ZU80 1094 aa16.8■□□□□ 0.28
FXN-201ENST00000377270 C14orf80Q86SX3 495 aa16.8■□□□□ 0.28
FXN-201ENST00000377270 SPICE1Q8N0Z3 855 aa16.8■□□□□ 0.28
FXN-201ENST00000377270 SMC1BQ8NDV3 1235 aa16.8■□□□□ 0.28
FXN-201ENST00000377270 LRRC15Q8TF66 581 aa16.8■□□□□ 0.28
FXN-201ENST00000377270 COA7Q96BR5 231 aa16.8■□□□□ 0.28
FXN-201ENST00000377270 AK8Q96MA6 479 aa16.8■□□□□ 0.28
FXN-201ENST00000377270 SUGT1Q9Y2Z0 365 aa16.8■□□□□ 0.28
FXN-201ENST00000377270 hCG_2014768A0A024R1R8 64 aa16.79■□□□□ 0.28
FXN-201ENST00000377270 TRIM49BA6NDI0 452 aa16.79■□□□□ 0.28
FXN-201ENST00000377270 G3V3G9 751 aa16.79■□□□□ 0.28
FXN-201ENST00000377270 H7C1D1 291 aa16.79■□□□□ 0.28
FXN-201ENST00000377270 KLRC4O43908 158 aa16.79■□□□□ 0.28
FXN-201ENST00000377270 KRT14P02533 472 aa16.79■□□□□ 0.28
FXN-201ENST00000377270 MMEP08473 750 aa16.79■□□□□ 0.28
FXN-201ENST00000377270 IDEP14735 1019 aa16.79■□□□□ 0.28
FXN-201ENST00000377270 FLT3P36888 993 aa16.79■□□□□ 0.28
FXN-201ENST00000377270 ITIH3Q06033 890 aa16.79■□□□□ 0.28
FXN-201ENST00000377270 CLPPQ16740 277 aaPredicted RBP16.79■□□□□ 0.28
FXN-201ENST00000377270 MAP7D1Q3KQU3 841 aa16.79■□□□□ 0.28
FXN-201ENST00000377270 DCAF8Q5TAQ9 597 aa16.79■□□□□ 0.28
FXN-201ENST00000377270 ARHGAP27Q6ZUM4 889 aa16.79■□□□□ 0.28
FXN-201ENST00000377270 APBB1IPQ7Z5R6 666 aaPredicted RBP16.79■□□□□ 0.28
FXN-201ENST00000377270 MYCLP1P12525 358 aaPredicted RBP16.79■□□□□ 0.28
FXN-201ENST00000377270 NR1D1P20393 614 aa16.79■□□□□ 0.28
FXN-201ENST00000377270 CCND1P24385 295 aa16.79■□□□□ 0.28
FXN-201ENST00000377270 MDH1P40925 334 aaKnown RBP16.79■□□□□ 0.28
FXN-201ENST00000377270 USP33Q8TEY7 942 aa16.79■□□□□ 0.28
FXN-201ENST00000377270 SERPINB13Q9UIV8 391 aa16.79■□□□□ 0.28
FXN-201ENST00000377270 CCDC166P0CW27 439 aa16.78■□□□□ 0.28
FXN-201ENST00000377270 GHRP10912 638 aa16.78■□□□□ 0.28
FXN-201ENST00000377270 SP100P23497 879 aaPredicted RBP16.78■□□□□ 0.28
FXN-201ENST00000377270 QPCTQ16769 361 aa16.78■□□□□ 0.28
FXN-201ENST00000377270 ASPRV1Q53RT3 343 aa16.78■□□□□ 0.28
FXN-201ENST00000377270 TMEM154Q6P9G4 183 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms