RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 TRIP13Q15645 432 aaPredicted RBP14.68□□□□□ -0.06
C9orf47-203ENST00000375851 CATSPER4Q7RTX7 472 aa14.68□□□□□ -0.06
C9orf47-203ENST00000375851 APOBEC3FQ8IUX4 373 aaKnown RBP14.68□□□□□ -0.06
C9orf47-203ENST00000375851 WHAMMQ8TF30 809 aa14.68□□□□□ -0.06
C9orf47-203ENST00000375851 HPS3Q969F9 1004 aa14.68□□□□□ -0.06
C9orf47-203ENST00000375851 FMO2Q99518 471 aa14.68□□□□□ -0.06
C9orf47-203ENST00000375851 SPATA31A6Q5VVP1 1343 aa14.68□□□□□ -0.06
C9orf47-203ENST00000375851 EPHA7Q15375 998 aa14.68□□□□□ -0.06
C9orf47-203ENST00000375851 GIMAP8Q8ND71 665 aaPredicted RBP14.68□□□□□ -0.06
C9orf47-203ENST00000375851 NYAP2Q9P242 653 aa14.68□□□□□ -0.06
C9orf47-203ENST00000375851 CNOT8Q9UFF9 292 aaKnown RBP14.68□□□□□ -0.06
C9orf47-203ENST00000375851 ZSCAN20P17040 1043 aaPredicted RBP14.67□□□□□ -0.06
C9orf47-203ENST00000375851 HPS5Q9UPZ3 1129 aa14.67□□□□□ -0.06
C9orf47-203ENST00000375851 CAPN7Q9Y6W3 813 aa14.67□□□□□ -0.06
C9orf47-203ENST00000375851 SH3BP5O60239 455 aa14.67□□□□□ -0.06
C9orf47-203ENST00000375851 SAT1P21673 171 aa14.67□□□□□ -0.06
C9orf47-203ENST00000375851 ARL4AP40617 200 aa14.67□□□□□ -0.06
C9orf47-203ENST00000375851 VAMP7P51809 220 aa14.67□□□□□ -0.06
C9orf47-203ENST00000375851 PDE1BQ01064 536 aa14.67□□□□□ -0.06
C9orf47-203ENST00000375851 INTS5Q6P9B9 1019 aaKnown RBP14.67□□□□□ -0.06
C9orf47-203ENST00000375851 LRRC8CQ8TDW0 803 aa14.67□□□□□ -0.06
C9orf47-203ENST00000375851 PSPC1Q8WXF1 523 aaKnown RBP14.67□□□□□ -0.06
C9orf47-203ENST00000375851 ACAD9Q9H845 621 aa14.67□□□□□ -0.06
C9orf47-203ENST00000375851 NFU1Q9UMS0 254 aa14.67□□□□□ -0.06
C9orf47-203ENST00000375851 DIP2BQ9P265 1576 aa14.67□□□□□ -0.06
C9orf47-203ENST00000375851 PDHBP11177 359 aa14.67□□□□□ -0.06
C9orf47-203ENST00000375851 BASP1P80723 227 aaKnown RBP14.67□□□□□ -0.06
C9orf47-203ENST00000375851 FMR1Q06787 632 aaKnown RBP eCLIP14.67□□□□□ -0.06
C9orf47-203ENST00000375851 ADCY1Q08828 1119 aa14.67□□□□□ -0.06
C9orf47-203ENST00000375851 NAA25Q14CX7 972 aa14.67□□□□□ -0.06
C9orf47-203ENST00000375851 KCTD6Q8NC69 237 aa14.67□□□□□ -0.06
C9orf47-203ENST00000375851 ANAPC7Q9UJX3 599 aa14.67□□□□□ -0.06
C9orf47-203ENST00000375851 STK38LQ9Y2H1 464 aa14.67□□□□□ -0.06
C9orf47-203ENST00000375851 PRPSAP2O60256 369 aa14.67□□□□□ -0.06
C9orf47-203ENST00000375851 EYA4O95677 639 aa14.67□□□□□ -0.06
C9orf47-203ENST00000375851 SLCO1A2P46721 670 aa14.67□□□□□ -0.06
C9orf47-203ENST00000375851 NFX1Q12986 1120 aaKnown RBP14.67□□□□□ -0.06
C9orf47-203ENST00000375851 SPATS2Q86XZ4 545 aaKnown RBP14.67□□□□□ -0.06
C9orf47-203ENST00000375851 SCINQ9Y6U3 715 aa14.67□□□□□ -0.06
C9orf47-203ENST00000375851 LPXNO60711 386 aa14.66□□□□□ -0.06
C9orf47-203ENST00000375851 ENTPD3O75355 529 aa14.66□□□□□ -0.06
C9orf47-203ENST00000375851 PNMA6AP0CW24 399 aaPredicted RBP14.66□□□□□ -0.06
C9orf47-203ENST00000375851 DRAP1Q14919 205 aaPredicted RBP14.66□□□□□ -0.06
C9orf47-203ENST00000375851 SLMAPQ14BN4 828 aa14.66□□□□□ -0.06
C9orf47-203ENST00000375851 PSMD6Q15008 389 aa14.66□□□□□ -0.06
C9orf47-203ENST00000375851 EMBQ6PCB8 327 aa14.66□□□□□ -0.06
C9orf47-203ENST00000375851 METTL23Q86XA0 190 aa14.66□□□□□ -0.06
C9orf47-203ENST00000375851 GSDMBQ8TAX9 411 aa14.66□□□□□ -0.06
C9orf47-203ENST00000375851 ZNF526Q8TF50 670 aaPredicted RBP14.66□□□□□ -0.06
C9orf47-203ENST00000375851 ZNF302Q9NR11 478 aa14.66□□□□□ -0.06
C9orf47-203ENST00000375851 TUBE1Q9UJT0 475 aa14.66□□□□□ -0.06
C9orf47-203ENST00000375851 ZBTB12Q9Y330 459 aaPredicted RBP14.66□□□□□ -0.06
C9orf47-203ENST00000375851 MIF4GDA9UHW6 222 aaKnown RBP14.66□□□□□ -0.06
C9orf47-203ENST00000375851 OATP04181 439 aa14.66□□□□□ -0.06
C9orf47-203ENST00000375851 TRIM49P0CI25 452 aa14.66□□□□□ -0.06
C9orf47-203ENST00000375851 TRIM49CP0CI26 452 aa14.66□□□□□ -0.06
C9orf47-203ENST00000375851 TMEM35BQ8NCS4 154 aa14.66□□□□□ -0.06
C9orf47-203ENST00000375851 DNAJC5Q9H3Z4 198 aa14.66□□□□□ -0.06
C9orf47-203ENST00000375851 GPR75-ASB3A0A0A6YYF3 556 aa14.66□□□□□ -0.06
C9orf47-203ENST00000375851 HMGCS2P54868 508 aa14.66□□□□□ -0.06
C9orf47-203ENST00000375851 TROAPQ12815 778 aa14.66□□□□□ -0.06
C9orf47-203ENST00000375851 DARS2Q6PI48 645 aaKnown RBP14.66□□□□□ -0.06
C9orf47-203ENST00000375851 ADSSL1Q8N142 457 aa14.66□□□□□ -0.06
C9orf47-203ENST00000375851 RNF10Q8N5U6 811 aaKnown RBP14.66□□□□□ -0.06
C9orf47-203ENST00000375851 PCDHA10Q9Y5I2 948 aa14.66□□□□□ -0.06
C9orf47-203ENST00000375851 ACTN1P12814 892 aa14.66□□□□□ -0.06
C9orf47-203ENST00000375851 GPC5P78333 572 aa14.66□□□□□ -0.06
C9orf47-203ENST00000375851 IL9RQ01113 521 aa14.66□□□□□ -0.06
C9orf47-203ENST00000375851 NNTQ13423 1086 aa14.66□□□□□ -0.06
C9orf47-203ENST00000375851 HAUS6Q7Z4H7 955 aa14.66□□□□□ -0.06
C9orf47-203ENST00000375851 RPAP3Q9H6T3 665 aaPredicted RBP14.66□□□□□ -0.06
C9orf47-203ENST00000375851 NGRNQ9NPE2 291 aaKnown RBP14.66□□□□□ -0.06
C9orf47-203ENST00000375851 CNTNAP5Q8WYK1 1306 aa14.65□□□□□ -0.06
C9orf47-203ENST00000375851 DPYDQ12882 1025 aa14.65□□□□□ -0.06
C9orf47-203ENST00000375851 MTF1Q14872 753 aa14.65□□□□□ -0.06
C9orf47-203ENST00000375851 TMEM270Q6UE05 265 aa14.65□□□□□ -0.06
C9orf47-203ENST00000375851 SAAL1Q96ER3 474 aa14.65□□□□□ -0.06
C9orf47-203ENST00000375851 OTUD5Q96G74 571 aa14.65□□□□□ -0.06
C9orf47-203ENST00000375851 STXBP3O00186 592 aa14.65□□□□□ -0.06
C9orf47-203ENST00000375851 KLRK1P26718 216 aa14.65□□□□□ -0.06
C9orf47-203ENST00000375851 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.65□□□□□ -0.06
C9orf47-203ENST00000375851 ZRANB2O95218 330 aaKnown RBP eCLIP14.65□□□□□ -0.06
C9orf47-203ENST00000375851 LIG3P49916 1009 aa14.65□□□□□ -0.06
C9orf47-203ENST00000375851 RNASELQ05823 741 aaKnown RBP14.65□□□□□ -0.06
C9orf47-203ENST00000375851 ALS2CLQ60I27 953 aa14.65□□□□□ -0.06
C9orf47-203ENST00000375851 OR6B3Q8NGW1 331 aa14.65□□□□□ -0.06
C9orf47-203ENST00000375851 MTRQ99707 1265 aa14.65□□□□□ -0.06
C9orf47-203ENST00000375851 LIMA1Q9UHB6 759 aaKnown RBP14.65□□□□□ -0.06
C9orf47-203ENST00000375851 PDS5AQ29RF7 1337 aaKnown RBP14.65□□□□□ -0.06
C9orf47-203ENST00000375851 CTNND1O60716 968 aaKnown RBP14.64□□□□□ -0.07
C9orf47-203ENST00000375851 NMT1P30419 496 aaKnown RBP14.64□□□□□ -0.07
C9orf47-203ENST00000375851 STK4Q13043 487 aa14.64□□□□□ -0.07
C9orf47-203ENST00000375851 ZNF568Q3ZCX4 644 aa14.64□□□□□ -0.07
C9orf47-203ENST00000375851 KRT39Q6A163 491 aa14.64□□□□□ -0.07
C9orf47-203ENST00000375851 ARMCX2Q7L311 632 aa14.64□□□□□ -0.07
C9orf47-203ENST00000375851 SIX6OS1Q8N1H7 587 aa14.64□□□□□ -0.07
C9orf47-203ENST00000375851 SCYL1Q96KG9 808 aa14.64□□□□□ -0.07
C9orf47-203ENST00000375851 PPP1R12CQ9BZL4 782 aa14.64□□□□□ -0.07
C9orf47-203ENST00000375851 EDEM3Q9BZQ6 932 aa14.64□□□□□ -0.07
C9orf47-203ENST00000375851 HIP1RO75146 1068 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms