RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 TLR9Q9NR96 1032 aa26.28■■□□□ 1.8
C9orf47-202ENST00000375850 TBKBP1A7MCY6 615 aa26.27■■□□□ 1.8
C9orf47-202ENST00000375850 WDR64B1ANS9 1081 aa26.27■■□□□ 1.8
C9orf47-202ENST00000375850 LAG3P18627 525 aa26.27■■□□□ 1.8
C9orf47-202ENST00000375850 NRIP1P48552 1158 aa26.27■■□□□ 1.8
C9orf47-202ENST00000375850 GATMP50440 423 aa26.27■■□□□ 1.8
C9orf47-202ENST00000375850 APOBRQ0VD83 1088 aa26.27■■□□□ 1.8
C9orf47-202ENST00000375850 KIZQ2M2Z5 673 aa26.27■■□□□ 1.8
C9orf47-202ENST00000375850 ADGRD2Q7Z7M1 963 aa26.27■■□□□ 1.8
C9orf47-202ENST00000375850 FAM228AQ86W67 206 aa26.27■■□□□ 1.8
C9orf47-202ENST00000375850 MICAL1Q8TDZ2 1067 aa26.27■■□□□ 1.8
C9orf47-202ENST00000375850 BRF1Q92994 677 aa26.27■■□□□ 1.8
C9orf47-202ENST00000375850 OSMRQ99650 979 aa26.27■■□□□ 1.8
C9orf47-202ENST00000375850 RNF26Q9BY78 433 aaPredicted RBP26.27■■□□□ 1.8
C9orf47-202ENST00000375850 TLE6Q9H808 572 aa26.27■■□□□ 1.8
C9orf47-202ENST00000375850 CLEC1BQ9P126 229 aa26.27■■□□□ 1.8
C9orf47-202ENST00000375850 LZTS1Q9Y250 596 aa26.27■■□□□ 1.8
C9orf47-202ENST00000375850 GPR32O75388 356 aa26.26■■□□□ 1.79
C9orf47-202ENST00000375850 PKN1Q16512 942 aa26.26■■□□□ 1.79
C9orf47-202ENST00000375850 PRR16Q569H4 304 aa26.26■■□□□ 1.79
C9orf47-202ENST00000375850 MFSD14AQ96MC6 490 aa26.26■■□□□ 1.79
C9orf47-202ENST00000375850 JAKMIP1Q96N16 626 aaKnown RBP26.26■■□□□ 1.79
C9orf47-202ENST00000375850 NRBP2Q9NSY0 501 aa26.26■■□□□ 1.79
C9orf47-202ENST00000375850 GABBR1Q9UBS5 961 aa26.26■■□□□ 1.79
C9orf47-202ENST00000375850 SAMM50Q9Y512 469 aa26.26■■□□□ 1.79
C9orf47-202ENST00000375850 FGF18O76093 207 aa26.25■■□□□ 1.79
C9orf47-202ENST00000375850 SRGAP2BP0DMP2 458 aa26.25■■□□□ 1.79
C9orf47-202ENST00000375850 RNF135Q8IUD6 432 aa26.25■■□□□ 1.79
C9orf47-202ENST00000375850 THNSL1Q8IYQ7 743 aa26.25■■□□□ 1.79
C9orf47-202ENST00000375850 RIT2Q99578 217 aa26.25■■□□□ 1.79
C9orf47-202ENST00000375850 AGXT2Q9BYV1 514 aa26.25■■□□□ 1.79
C9orf47-202ENST00000375850 TMEM117Q9H0C3 514 aa26.25■■□□□ 1.79
C9orf47-202ENST00000375850 PUF60Q9UHX1 559 aaKnown RBP26.25■■□□□ 1.79
C9orf47-202ENST00000375850 ATG2AQ2TAZ0 1938 aa26.24■■□□□ 1.79
C9orf47-202ENST00000375850 ZSCAN20P17040 1043 aaPredicted RBP26.24■■□□□ 1.79
C9orf47-202ENST00000375850 IBSPP21815 317 aaPredicted RBP26.24■■□□□ 1.79
C9orf47-202ENST00000375850 PSMA5P28066 241 aa26.24■■□□□ 1.79
C9orf47-202ENST00000375850 SFNP31947 248 aa26.24■■□□□ 1.79
C9orf47-202ENST00000375850 HSPA4P34932 840 aa26.24■■□□□ 1.79
C9orf47-202ENST00000375850 USP11P51784 963 aa26.24■■□□□ 1.79
C9orf47-202ENST00000375850 DSC3Q14574 896 aa26.24■■□□□ 1.79
C9orf47-202ENST00000375850 FAM102BQ5T8I3 360 aa26.24■■□□□ 1.79
C9orf47-202ENST00000375850 COLGALT1Q8NBJ5 622 aa26.24■■□□□ 1.79
C9orf47-202ENST00000375850 C22orf23Q9BZE7 217 aa26.24■■□□□ 1.79
C9orf47-202ENST00000375850 TYW1Q9NV66 732 aaKnown RBP26.24■■□□□ 1.79
C9orf47-202ENST00000375850 PPFIA3O75145 1194 aa26.23■■□□□ 1.79
C9orf47-202ENST00000375850 VTNP04004 478 aa26.23■■□□□ 1.79
C9orf47-202ENST00000375850 PLCB3Q01970 1234 aa26.23■■□□□ 1.79
C9orf47-202ENST00000375850 RBM23Q86U06 439 aaKnown RBP26.23■■□□□ 1.79
C9orf47-202ENST00000375850 SH3GLB2Q9NR46 395 aa26.23■■□□□ 1.79
C9orf47-202ENST00000375850 DISC1Q9NRI5 854 aa26.23■■□□□ 1.79
C9orf47-202ENST00000375850 MUTYHQ9UIF7 546 aa26.23■■□□□ 1.79
C9orf47-202ENST00000375850 AKT3Q9Y243 479 aa26.23■■□□□ 1.79
C9orf47-202ENST00000375850 OATP04181 439 aa26.22■■□□□ 1.79
C9orf47-202ENST00000375850 IFNAR1P17181 557 aa26.22■■□□□ 1.79
C9orf47-202ENST00000375850 RPS6KB1P23443 525 aa26.22■■□□□ 1.79
C9orf47-202ENST00000375850 EIF4BP23588 611 aaKnown RBP26.22■■□□□ 1.79
C9orf47-202ENST00000375850 PPM1AP35813 382 aa26.22■■□□□ 1.79
C9orf47-202ENST00000375850 JAK3P52333 1124 aa26.22■■□□□ 1.79
C9orf47-202ENST00000375850 CDC42EP1Q00587 391 aa26.22■■□□□ 1.79
C9orf47-202ENST00000375850 EFCAB12Q6NXP0 572 aa26.22■■□□□ 1.79
C9orf47-202ENST00000375850 ABI1Q8IZP0 508 aa26.22■■□□□ 1.79
C9orf47-202ENST00000375850 LINC01465Q8N7H1 131 aa26.22■■□□□ 1.79
C9orf47-202ENST00000375850 RSPH1Q8WYR4 309 aa26.22■■□□□ 1.79
C9orf47-202ENST00000375850 EDAQ92838 391 aa26.22■■□□□ 1.79
C9orf47-202ENST00000375850 LENG9Q96B70 501 aa26.22■■□□□ 1.79
C9orf47-202ENST00000375850 SNX14Q9Y5W7 946 aa26.22■■□□□ 1.79
C9orf47-202ENST00000375850 LOC730098B7Z3J9 87 aa26.21■■□□□ 1.79
C9orf47-202ENST00000375850 GLP2RO95838 553 aa26.21■■□□□ 1.79
C9orf47-202ENST00000375850 ATF7P17544 494 aaPredicted RBP26.21■■□□□ 1.79
C9orf47-202ENST00000375850 NLRP11P59045 1033 aaKnown RBP26.21■■□□□ 1.79
C9orf47-202ENST00000375850 CBX2Q14781 532 aaPredicted RBP26.21■■□□□ 1.79
C9orf47-202ENST00000375850 NTRK3Q16288 839 aa26.21■■□□□ 1.79
C9orf47-202ENST00000375850 DUSP6Q16828 381 aa26.21■■□□□ 1.79
C9orf47-202ENST00000375850 LRRC43Q8N309 656 aa26.21■■□□□ 1.79
C9orf47-202ENST00000375850 RDM1Q8NG50 284 aa26.21■■□□□ 1.79
C9orf47-202ENST00000375850 RASGRP4Q8TDF6 673 aa26.21■■□□□ 1.79
C9orf47-202ENST00000375850 MRPS27Q92552 414 aaKnown RBP26.21■■□□□ 1.79
C9orf47-202ENST00000375850 PHKBQ93100 1093 aa26.21■■□□□ 1.79
C9orf47-202ENST00000375850 PPP1R16BQ96T49 567 aa26.21■■□□□ 1.79
C9orf47-202ENST00000375850 PHF7Q9BWX1 381 aaPredicted RBP26.21■■□□□ 1.79
C9orf47-202ENST00000375850 ADAMTS10Q9H324 1103 aa26.21■■□□□ 1.79
C9orf47-202ENST00000375850 CWH43Q9H720 699 aa26.21■■□□□ 1.79
C9orf47-202ENST00000375850 NGRNQ9NPE2 291 aaKnown RBP26.21■■□□□ 1.79
C9orf47-202ENST00000375850 BARX2Q9UMQ3 279 aaPredicted RBP26.21■■□□□ 1.79
C9orf47-202ENST00000375850 USP15Q9Y4E8 981 aaPredicted RBP26.21■■□□□ 1.79
C9orf47-202ENST00000375850 MUC6Q6W4X9 2439 aa26.2■■□□□ 1.79
C9orf47-202ENST00000375850 FSCN2O14926 492 aa26.2■■□□□ 1.78
C9orf47-202ENST00000375850 GAS7O60861 476 aa26.2■■□□□ 1.78
C9orf47-202ENST00000375850 REC8O95072 547 aa26.2■■□□□ 1.78
C9orf47-202ENST00000375850 CPA1P15085 419 aa26.2■■□□□ 1.78
C9orf47-202ENST00000375850 CLCN3P51790 818 aa26.2■■□□□ 1.78
C9orf47-202ENST00000375850 EVCP57679 992 aa26.2■■□□□ 1.78
C9orf47-202ENST00000375850 TMEM184AQ6ZMB5 413 aa26.2■■□□□ 1.78
C9orf47-202ENST00000375850 BMP8AQ7Z5Y6 402 aa26.2■■□□□ 1.78
C9orf47-202ENST00000375850 FAM177A1Q8N128 213 aaPredicted RBP26.2■■□□□ 1.78
C9orf47-202ENST00000375850 KIAA1671Q9BY89 1806 aa26.2■■□□□ 1.78
C9orf47-202ENST00000375850 FGFR1P11362 822 aa26.19■■□□□ 1.78
C9orf47-202ENST00000375850 KRT17Q04695 432 aa26.19■■□□□ 1.78
C9orf47-202ENST00000375850 HFE2Q6ZVN8 426 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms