RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 BUB1BO60566 1050 aaPredicted RBP14.08□□□□□ -0.16
MSH5-204ENST00000375755 PLCG1P19174 1290 aa14.08□□□□□ -0.16
MSH5-204ENST00000375755 TECP42680 631 aa14.08□□□□□ -0.16
MSH5-204ENST00000375755 NAB2Q15742 525 aa14.08□□□□□ -0.16
MSH5-204ENST00000375755 CC2D2BQ6DHV5 1058 aa14.08□□□□□ -0.16
MSH5-204ENST00000375755 CEP120Q8N960 986 aa14.08□□□□□ -0.16
MSH5-204ENST00000375755 KIAA0895Q8NCT3 520 aa14.08□□□□□ -0.16
MSH5-204ENST00000375755 MDM1Q8TC05 714 aa14.08□□□□□ -0.16
MSH5-204ENST00000375755 UBLCP1Q8WVY7 318 aaPredicted RBP14.08□□□□□ -0.16
MSH5-204ENST00000375755 LRRC45Q96CN5 670 aa14.08□□□□□ -0.16
MSH5-204ENST00000375755 PSMD1Q99460 953 aa14.08□□□□□ -0.16
MSH5-204ENST00000375755 CCSER1Q9C0I3 900 aa14.08□□□□□ -0.16
MSH5-204ENST00000375755 EBF2Q9HAK2 575 aa14.08□□□□□ -0.16
MSH5-204ENST00000375755 ZNF70Q9UC06 446 aaPredicted RBP14.08□□□□□ -0.16
MSH5-204ENST00000375755 CNTNAP1P78357 1384 aa14.08□□□□□ -0.16
MSH5-204ENST00000375755 SSU72P8A0A1W2PR75 194 aa14.07□□□□□ -0.16
MSH5-204ENST00000375755 CCT8L1PA6NM43 557 aa14.07□□□□□ -0.16
MSH5-204ENST00000375755 USP17L15C9J2P7 530 aa14.07□□□□□ -0.16
MSH5-204ENST00000375755 USP17L13C9JLJ4 530 aa14.07□□□□□ -0.16
MSH5-204ENST00000375755 USP17L11C9JVI0 530 aa14.07□□□□□ -0.16
MSH5-204ENST00000375755 USP17L18D6R9N7 530 aa14.07□□□□□ -0.16
MSH5-204ENST00000375755 USP17L22D6RA61 530 aa14.07□□□□□ -0.16
MSH5-204ENST00000375755 USP17L17D6RBQ6 530 aa14.07□□□□□ -0.16
MSH5-204ENST00000375755 USP17L19D6RCP7 530 aa14.07□□□□□ -0.16
MSH5-204ENST00000375755 USP17L20D6RJB6 530 aa14.07□□□□□ -0.16
MSH5-204ENST00000375755 RBAK-RBAKDNI3L0D1 243 aa14.07□□□□□ -0.16
MSH5-204ENST00000375755 CXCL9Q07325 125 aa14.07□□□□□ -0.16
MSH5-204ENST00000375755 USP17L24Q0WX57 530 aa14.07□□□□□ -0.16
MSH5-204ENST00000375755 SF3A3Q12874 501 aaKnown RBP eCLIP14.07□□□□□ -0.162e-6■■■□□ 19.1
MSH5-204ENST00000375755 USP17L6PQ6QN14 398 aa14.07□□□□□ -0.16
MSH5-204ENST00000375755 ARMC9Q7Z3E5 817 aa14.07□□□□□ -0.16
MSH5-204ENST00000375755 SLC16A10Q8TF71 515 aa14.07□□□□□ -0.16
MSH5-204ENST00000375755 MYH7BA7E2Y1 1941 aa14.07□□□□□ -0.16
MSH5-204ENST00000375755 PNMA6FA0A0J9YX94 578 aa14.07□□□□□ -0.16
MSH5-204ENST00000375755 F5H6K3 240 aa14.07□□□□□ -0.16
MSH5-204ENST00000375755 GNA11P29992 359 aa14.07□□□□□ -0.16
MSH5-204ENST00000375755 TNNI2P48788 182 aa14.07□□□□□ -0.16
MSH5-204ENST00000375755 KLRC3Q07444 240 aa14.07□□□□□ -0.16
MSH5-204ENST00000375755 SEMA3FQ13275 785 aa14.07□□□□□ -0.16
MSH5-204ENST00000375755 DLGAP5Q15398 846 aa14.07□□□□□ -0.16
MSH5-204ENST00000375755 ACER1Q8TDN7 264 aa14.07□□□□□ -0.16
MSH5-204ENST00000375755 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.07□□□□□ -0.16
MSH5-204ENST00000375755 MYO3BQ8WXR4 1341 aa14.07□□□□□ -0.16
MSH5-204ENST00000375755 TLR2O60603 784 aa14.06□□□□□ -0.16
MSH5-204ENST00000375755 SMARCA1P28370 1054 aa14.06□□□□□ -0.16
MSH5-204ENST00000375755 ADCY7P51828 1080 aa14.06□□□□□ -0.16
MSH5-204ENST00000375755 CUL1Q13616 776 aa14.06□□□□□ -0.16
MSH5-204ENST00000375755 MAN2A1Q16706 1144 aa14.06□□□□□ -0.16
MSH5-204ENST00000375755 QRICH1Q2TAL8 776 aa14.06□□□□□ -0.16
MSH5-204ENST00000375755 RBM26Q5T8P6 1007 aaKnown RBP14.06□□□□□ -0.16
MSH5-204ENST00000375755 CACNA2D4Q7Z3S7 1137 aa14.06□□□□□ -0.16
MSH5-204ENST00000375755 NEK8Q86SG6 692 aa14.06□□□□□ -0.16
MSH5-204ENST00000375755 TCP11Q8WWU5 503 aa14.06□□□□□ -0.16
MSH5-204ENST00000375755 CCDC17Q96LX7 622 aa14.06□□□□□ -0.16
MSH5-204ENST00000375755 P2RX7Q99572 595 aaKnown RBP14.06□□□□□ -0.16
MSH5-204ENST00000375755 KANSL2Q9H9L4 492 aa14.06□□□□□ -0.16
MSH5-204ENST00000375755 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.06□□□□□ -0.16
MSH5-204ENST00000375755 SLC39A2Q9NP94 309 aa14.06□□□□□ -0.16
MSH5-204ENST00000375755 NLRC4Q9NPP4 1024 aa14.06□□□□□ -0.16
MSH5-204ENST00000375755 L3MBTL1Q9Y468 752 aa14.06□□□□□ -0.16
MSH5-204ENST00000375755 PCDHGC5Q9Y5F6 944 aa14.06□□□□□ -0.16
MSH5-204ENST00000375755 INHBEP58166 350 aa14.06□□□□□ -0.16
MSH5-204ENST00000375755 ZYXQ15942 572 aaKnown RBP14.06□□□□□ -0.16
MSH5-204ENST00000375755 GALNT17Q6IS24 598 aa14.06□□□□□ -0.16
MSH5-204ENST00000375755 EIF1ADQ8N9N8 165 aaKnown RBP14.06□□□□□ -0.16
MSH5-204ENST00000375755 CCDC47Q96A33 483 aaKnown RBP14.06□□□□□ -0.16
MSH5-204ENST00000375755 PCNTO95613 3336 aa14.06□□□□□ -0.16
MSH5-204ENST00000375755 ZBTB5O15062 677 aa14.06□□□□□ -0.16
MSH5-204ENST00000375755 NDUFB10O96000 172 aa14.06□□□□□ -0.16
MSH5-204ENST00000375755 TXKP42681 527 aa14.06□□□□□ -0.16
MSH5-204ENST00000375755 R3HDM1Q15032 1099 aaKnown RBP14.06□□□□□ -0.16
MSH5-204ENST00000375755 ZKSCAN8Q15776 578 aaPredicted RBP14.06□□□□□ -0.16
MSH5-204ENST00000375755 USH1GQ495M9 461 aa14.06□□□□□ -0.16
MSH5-204ENST00000375755 CENPPQ6IPU0 288 aa14.06□□□□□ -0.16
MSH5-204ENST00000375755 KRT25Q7Z3Z0 450 aa14.06□□□□□ -0.16
MSH5-204ENST00000375755 CHMP6Q96FZ7 201 aa14.06□□□□□ -0.16
MSH5-204ENST00000375755 PACSIN1Q9BY11 444 aa14.06□□□□□ -0.16
MSH5-204ENST00000375755 ASTN2O75129 1339 aaPredicted RBP14.05□□□□□ -0.16
MSH5-204ENST00000375755 CLTAP09496 248 aa14.05□□□□□ -0.16
MSH5-204ENST00000375755 KRT71Q3SY84 523 aa14.05□□□□□ -0.16
MSH5-204ENST00000375755 CCDC63Q8NA47 563 aa14.05□□□□□ -0.16
MSH5-204ENST00000375755 CCDC197Q8NCU1 140 aa14.05□□□□□ -0.16
MSH5-204ENST00000375755 ZNF483Q8TF39 744 aaPredicted RBP14.05□□□□□ -0.16
MSH5-204ENST00000375755 LMBR1Q8WVP7 490 aa14.05□□□□□ -0.16
MSH5-204ENST00000375755 MKL1Q969V6 931 aa14.05□□□□□ -0.16
MSH5-204ENST00000375755 XPO6Q96QU8 1125 aaKnown RBP14.05□□□□□ -0.16
MSH5-204ENST00000375755 GLIS2Q9BZE0 524 aaPredicted RBP14.05□□□□□ -0.16
MSH5-204ENST00000375755 PIM2Q9P1W9 311 aa14.05□□□□□ -0.16
MSH5-204ENST00000375755 C15orf41Q9Y2V0 281 aa14.05□□□□□ -0.16
MSH5-204ENST00000375755 BRCA1P38398 1863 aaKnown RBP14.05□□□□□ -0.16
MSH5-204ENST00000375755 EME2A4GXA9 379 aaPredicted RBP14.05□□□□□ -0.16
MSH5-204ENST00000375755 BHMG1C9JSJ3 638 aaPredicted RBP14.05□□□□□ -0.16
MSH5-204ENST00000375755 KCNK3O14649 394 aa14.05□□□□□ -0.16
MSH5-204ENST00000375755 ANP32DO95626 131 aa14.05□□□□□ -0.16
MSH5-204ENST00000375755 GCKP35557 465 aa14.05□□□□□ -0.16
MSH5-204ENST00000375755 PRELPP51888 382 aa14.05□□□□□ -0.16
MSH5-204ENST00000375755 KCNMA1Q12791 1236 aa14.05□□□□□ -0.16
MSH5-204ENST00000375755 CABP7Q86V35 215 aa14.05□□□□□ -0.16
MSH5-204ENST00000375755 PNMA8AQ86V59 439 aaPredicted RBP14.05□□□□□ -0.16
MSH5-204ENST00000375755 SCFD2Q8WU76 684 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms