RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 ZNF473Q8WTR7 871 aaKnown RBP10.89□□□□□ -0.67
PTCH1-204ENST00000375290 MAP3K14Q99558 947 aa10.89□□□□□ -0.67
PTCH1-204ENST00000375290 ZC3H13Q5T200 1668 aaKnown RBP10.89□□□□□ -0.67
PTCH1-204ENST00000375290 NOP56O00567 594 aaKnown RBP10.89□□□□□ -0.67
PTCH1-204ENST00000375290 H2AFYO75367 372 aaKnown RBP10.89□□□□□ -0.67
PTCH1-204ENST00000375290 TMOD1P28289 359 aa10.89□□□□□ -0.67
PTCH1-204ENST00000375290 CTDSPL2Q05D32 466 aa10.89□□□□□ -0.67
PTCH1-204ENST00000375290 AASDHQ4L235 1098 aaPredicted RBP10.89□□□□□ -0.67
PTCH1-204ENST00000375290 FAM20AQ96MK3 541 aa10.89□□□□□ -0.67
PTCH1-204ENST00000375290 ISCUQ9H1K1 167 aa10.89□□□□□ -0.67
PTCH1-204ENST00000375290 COPG1Q9Y678 874 aaKnown RBP10.89□□□□□ -0.67
PTCH1-204ENST00000375290 DEFA1P59665 94 aa10.89□□□□□ -0.67
PTCH1-204ENST00000375290 DEFA3P59666 94 aa10.89□□□□□ -0.67
PTCH1-204ENST00000375290 SLC39A6Q13433 755 aa10.89□□□□□ -0.67
PTCH1-204ENST00000375290 E4F1Q66K89 784 aaPredicted RBP10.89□□□□□ -0.67
PTCH1-204ENST00000375290 RIN3Q8TB24 985 aa10.89□□□□□ -0.67
PTCH1-204ENST00000375290 PIK3R2O00459 728 aa10.89□□□□□ -0.67
PTCH1-204ENST00000375290 MOCS3O95396 460 aa10.89□□□□□ -0.67
PTCH1-204ENST00000375290 LAMB3Q13751 1172 aa10.89□□□□□ -0.67
PTCH1-204ENST00000375290 KRT24Q2M2I5 525 aa10.89□□□□□ -0.67
PTCH1-204ENST00000375290 C16orf89Q6UX73 402 aa10.89□□□□□ -0.67
PTCH1-204ENST00000375290 ATP2C1P98194 919 aaPredicted RBP10.89□□□□□ -0.67
PTCH1-204ENST00000375290 FAM160B1Q5W0V3 765 aa10.89□□□□□ -0.67
PTCH1-204ENST00000375290 TNIP2Q8NFZ5 429 aa10.89□□□□□ -0.67
PTCH1-204ENST00000375290 KRT8P05787 483 aa10.89□□□□□ -0.67
PTCH1-204ENST00000375290 MESDQ14696 234 aa10.89□□□□□ -0.67
PTCH1-204ENST00000375290 KYAT1Q16773 422 aa10.89□□□□□ -0.67
PTCH1-204ENST00000375290 TRPV6Q9H1D0 765 aa10.89□□□□□ -0.67
PTCH1-204ENST00000375290 ADGRA3Q8IWK6 1321 aa10.89□□□□□ -0.67
PTCH1-204ENST00000375290 P4HA2O15460 535 aa10.89□□□□□ -0.67
PTCH1-204ENST00000375290 NR1I3Q14994 352 aa10.89□□□□□ -0.67
PTCH1-204ENST00000375290 FAM83BQ5T0W9 1011 aa10.89□□□□□ -0.67
PTCH1-204ENST00000375290 TPH2Q8IWU9 490 aa10.89□□□□□ -0.67
PTCH1-204ENST00000375290 POP5Q969H6 163 aaKnown RBP10.89□□□□□ -0.67
PTCH1-204ENST00000375290 PALMO75781 387 aa10.89□□□□□ -0.67
PTCH1-204ENST00000375290 PIK3CAP42336 1068 aa10.89□□□□□ -0.67
PTCH1-204ENST00000375290 SERPINB12Q96P63 405 aa10.89□□□□□ -0.67
PTCH1-204ENST00000375290 MAGEB5Q9BZ81 275 aa10.89□□□□□ -0.67
PTCH1-204ENST00000375290 USPL1Q5W0Q7 1092 aa10.88□□□□□ -0.67
PTCH1-204ENST00000375290 STAG2Q8N3U4 1231 aa10.88□□□□□ -0.67
PTCH1-204ENST00000375290 PBXIP1Q96AQ6 731 aa10.88□□□□□ -0.67
PTCH1-204ENST00000375290 ZNF512BQ96KM6 892 aaPredicted RBP10.88□□□□□ -0.67
PTCH1-204ENST00000375290 DCLRE1BQ9H816 532 aa10.88□□□□□ -0.67
PTCH1-204ENST00000375290 HNRNPCP07910 306 aaKnown RBP eCLIP10.88□□□□□ -0.67
PTCH1-204ENST00000375290 BRAFP15056 766 aa10.88□□□□□ -0.67
PTCH1-204ENST00000375290 C4BPBP20851 252 aa10.88□□□□□ -0.67
PTCH1-204ENST00000375290 FBXL13Q8NEE6 735 aa10.88□□□□□ -0.67
PTCH1-204ENST00000375290 CCDC28BQ9BUN5 200 aa10.88□□□□□ -0.67
PTCH1-204ENST00000375290 SLC5A4Q9NY91 659 aa10.88□□□□□ -0.67
PTCH1-204ENST00000375290 NSFL1CQ9UNZ2 370 aaKnown RBP10.88□□□□□ -0.67
PTCH1-204ENST00000375290 IQGAP1P46940 1657 aa10.88□□□□□ -0.67
PTCH1-204ENST00000375290 KDM6BO15054 1643 aa10.88□□□□□ -0.67
PTCH1-204ENST00000375290 TMPRSS15P98073 1019 aa10.88□□□□□ -0.67
PTCH1-204ENST00000375290 CNGA3Q16281 694 aa10.88□□□□□ -0.67
PTCH1-204ENST00000375290 DNAJC9Q8WXX5 260 aa10.88□□□□□ -0.67
PTCH1-204ENST00000375290 ECT2Q9H8V3 914 aa10.88□□□□□ -0.67
PTCH1-204ENST00000375290 CCT8L1PA6NM43 557 aa10.88□□□□□ -0.67
PTCH1-204ENST00000375290 HNRNPDLO14979 420 aaKnown RBP10.88□□□□□ -0.67
PTCH1-204ENST00000375290 APOA4P06727 396 aa10.88□□□□□ -0.67
PTCH1-204ENST00000375290 IL6STP40189 918 aaPredicted RBP10.88□□□□□ -0.67
PTCH1-204ENST00000375290 IRAK1P51617 712 aa10.88□□□□□ -0.67
PTCH1-204ENST00000375290 JAK3P52333 1124 aa10.88□□□□□ -0.67
PTCH1-204ENST00000375290 YARSP54577 528 aaKnown RBP10.88□□□□□ -0.67
PTCH1-204ENST00000375290 GRM1Q13255 1194 aa10.88□□□□□ -0.67
PTCH1-204ENST00000375290 ANKRD36BP1Q96IX9 119 aa10.88□□□□□ -0.67
PTCH1-204ENST00000375290 VCPKMTQ9H867 229 aa10.88□□□□□ -0.67
PTCH1-204ENST00000375290 YY1P25490 414 aa10.88□□□□□ -0.67
PTCH1-204ENST00000375290 ARL13BQ3SXY8 428 aa10.88□□□□□ -0.67
PTCH1-204ENST00000375290 FRA10AC1Q70Z53 315 aa10.88□□□□□ -0.67
PTCH1-204ENST00000375290 CLIC6Q96NY7 704 aa10.88□□□□□ -0.67
PTCH1-204ENST00000375290 GPCPD1Q9NPB8 672 aa10.88□□□□□ -0.67
PTCH1-204ENST00000375290 NRBP2Q9NSY0 501 aa10.88□□□□□ -0.67
PTCH1-204ENST00000375290 NSMCE4AQ9NXX6 385 aa10.88□□□□□ -0.67
PTCH1-204ENST00000375290 E9PCH4 1651 aa10.88□□□□□ -0.67
PTCH1-204ENST00000375290 CCDC78A2IDD5 438 aa10.88□□□□□ -0.67
PTCH1-204ENST00000375290 FAM47DPA6NHR8 397 aa10.88□□□□□ -0.67
PTCH1-204ENST00000375290 CYP2J2P51589 502 aa10.88□□□□□ -0.67
PTCH1-204ENST00000375290 JADE3Q92613 823 aa10.88□□□□□ -0.67
PTCH1-204ENST00000375290 CCSER1Q9C0I3 900 aa10.88□□□□□ -0.67
PTCH1-204ENST00000375290 ING2Q9H160 280 aa10.88□□□□□ -0.67
PTCH1-204ENST00000375290 PICK1Q9NRD5 415 aa10.88□□□□□ -0.67
PTCH1-204ENST00000375290 NPEPPSP55786 919 aa10.88□□□□□ -0.67
PTCH1-204ENST00000375290 PRPF38AQ8NAV1 312 aaKnown RBP10.88□□□□□ -0.67
PTCH1-204ENST00000375290 JDP2Q8WYK2 163 aa10.88□□□□□ -0.67
PTCH1-204ENST00000375290 KANSL1LA0AUZ9 987 aa10.88□□□□□ -0.67
PTCH1-204ENST00000375290 CFAP69A5D8W1 941 aa10.88□□□□□ -0.67
PTCH1-204ENST00000375290 USP17L12C9JPN9 530 aa10.88□□□□□ -0.67
PTCH1-204ENST00000375290 USP17L21D6R901 530 aa10.88□□□□□ -0.67
PTCH1-204ENST00000375290 SERPINB9P50453 376 aa10.88□□□□□ -0.67
PTCH1-204ENST00000375290 TOB2Q14106 344 aaPredicted RBP10.88□□□□□ -0.67
PTCH1-204ENST00000375290 EPC1Q9H2F5 836 aa10.88□□□□□ -0.67
PTCH1-204ENST00000375290 KANSL2Q9H9L4 492 aa10.88□□□□□ -0.67
PTCH1-204ENST00000375290 ATP8B3O60423 1300 aa10.88□□□□□ -0.67
PTCH1-204ENST00000375290 PLS3P13797 630 aa10.87□□□□□ -0.67
PTCH1-204ENST00000375290 EEF1B2P24534 225 aaKnown RBP10.87□□□□□ -0.67
PTCH1-204ENST00000375290 RAD23BP54727 409 aa10.87□□□□□ -0.67
PTCH1-204ENST00000375290 COPS2P61201 443 aa10.87□□□□□ -0.67
PTCH1-204ENST00000375290 PDXKO00764 312 aa10.87□□□□□ -0.67
PTCH1-204ENST00000375290 NUP107P57740 925 aa10.87□□□□□ -0.67
PTCH1-204ENST00000375290 FBXO11Q86XK2 927 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms