RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 LAMTOR5O43504 91 aa20.09■□□□□ 0.81
H2AFX-201ENST00000375167 RPS6KA5O75582 802 aa20.09■□□□□ 0.81
H2AFX-201ENST00000375167 CXCL14O95715 111 aa20.09■□□□□ 0.81
H2AFX-201ENST00000375167 MRPS9P82933 396 aaKnown RBP20.09■□□□□ 0.81
H2AFX-201ENST00000375167 LETM2Q2VYF4 491 aa20.09■□□□□ 0.81
H2AFX-201ENST00000375167 ABI1Q8IZP0 508 aa20.09■□□□□ 0.81
H2AFX-201ENST00000375167 RSAD2Q8WXG1 361 aa20.09■□□□□ 0.81
H2AFX-201ENST00000375167 ELAC1Q9H777 363 aaKnown RBP20.09■□□□□ 0.81
H2AFX-201ENST00000375167 PARP1P09874 1014 aaKnown RBP20.08■□□□□ 0.81
H2AFX-201ENST00000375167 KCNA4P22459 653 aa20.08■□□□□ 0.81
H2AFX-201ENST00000375167 ALX1Q15699 326 aa20.08■□□□□ 0.81
H2AFX-201ENST00000375167 VPS53Q5VIR6 699 aa20.08■□□□□ 0.81
H2AFX-201ENST00000375167 DGKHQ86XP1 1220 aa20.08■□□□□ 0.81
H2AFX-201ENST00000375167 SLC39A11Q8N1S5 342 aa20.08■□□□□ 0.81
H2AFX-201ENST00000375167 GPR152Q8TDT2 470 aa20.08■□□□□ 0.81
H2AFX-201ENST00000375167 SMARCAD1Q9H4L7 1026 aa20.08■□□□□ 0.81
H2AFX-201ENST00000375167 KAT14Q9H8E8 782 aa20.08■□□□□ 0.81
H2AFX-201ENST00000375167 SPATA6Q9NWH7 488 aaPredicted RBP20.08■□□□□ 0.81
H2AFX-201ENST00000375167 RTEL1Q9NZ71 1219 aa20.08■□□□□ 0.81
H2AFX-201ENST00000375167 INSRRP14616 1297 aa20.08■□□□□ 0.8
H2AFX-201ENST00000375167 GLULP15104 373 aa20.08■□□□□ 0.8
H2AFX-201ENST00000375167 TGM1P22735 817 aa20.08■□□□□ 0.8
H2AFX-201ENST00000375167 GIT2Q14161 759 aa20.08■□□□□ 0.8
H2AFX-201ENST00000375167 DCLRE1AQ6PJP8 1040 aa20.08■□□□□ 0.8
H2AFX-201ENST00000375167 LRRC55Q6ZSA7 311 aa20.08■□□□□ 0.8
H2AFX-201ENST00000375167 SLC22A17Q8WUG5 538 aa20.08■□□□□ 0.8
H2AFX-201ENST00000375167 CASD1Q96PB1 797 aa20.08■□□□□ 0.8
H2AFX-201ENST00000375167 FOXQ1Q9C009 403 aa20.08■□□□□ 0.8
H2AFX-201ENST00000375167 GINS2Q9Y248 185 aa20.08■□□□□ 0.8
H2AFX-201ENST00000375167 PCDHA2Q9Y5H9 948 aa20.08■□□□□ 0.8
H2AFX-201ENST00000375167 FRMPD4Q14CM0 1322 aa20.07■□□□□ 0.8
H2AFX-201ENST00000375167 TBC1D4O60343 1298 aa20.07■□□□□ 0.8
H2AFX-201ENST00000375167 CENPBP07199 599 aaPredicted RBP20.07■□□□□ 0.8
H2AFX-201ENST00000375167 PCP11498 1178 aaKnown RBP20.07■□□□□ 0.8
H2AFX-201ENST00000375167 GBP2P32456 591 aaPredicted RBP20.07■□□□□ 0.8
H2AFX-201ENST00000375167 CSTF1Q05048 431 aaKnown RBP20.07■□□□□ 0.8
H2AFX-201ENST00000375167 MFSD6Q6ZSS7 791 aa20.07■□□□□ 0.8
H2AFX-201ENST00000375167 PPFIBP1Q86W92 1011 aa20.07■□□□□ 0.8
H2AFX-201ENST00000375167 NME8Q8N427 588 aa20.07■□□□□ 0.8
H2AFX-201ENST00000375167 SLC44A3Q8N4M1 653 aa20.07■□□□□ 0.8
H2AFX-201ENST00000375167 FEZF2Q8TBJ5 459 aa20.07■□□□□ 0.8
H2AFX-201ENST00000375167 SEPT1Q8WYJ6 367 aa20.07■□□□□ 0.8
H2AFX-201ENST00000375167 TNPO1Q92973 898 aaKnown RBP20.07■□□□□ 0.8
H2AFX-201ENST00000375167 NXPE3Q969Y0 559 aa20.07■□□□□ 0.8
H2AFX-201ENST00000375167 ZKSCAN3Q9BRR0 538 aa20.07■□□□□ 0.8
H2AFX-201ENST00000375167 BCO2Q9BYV7 579 aa20.07■□□□□ 0.8
H2AFX-201ENST00000375167 PARD6AQ9NPB6 346 aa20.07■□□□□ 0.8
H2AFX-201ENST00000375167 GPR182O15218 404 aa20.06■□□□□ 0.8
H2AFX-201ENST00000375167 PTPN14Q15678 1187 aa20.06■□□□□ 0.8
H2AFX-201ENST00000375167 ZBTB44Q8NCP5 570 aa20.06■□□□□ 0.8
H2AFX-201ENST00000375167 ESR2Q92731 530 aa20.06■□□□□ 0.8
H2AFX-201ENST00000375167 TMEM169Q96HH4 297 aa20.06■□□□□ 0.8
H2AFX-201ENST00000375167 ZSCAN32Q9NX65 697 aa20.06■□□□□ 0.8
H2AFX-201ENST00000375167 ST3GAL5Q9UNP4 418 aa20.06■□□□□ 0.8
H2AFX-201ENST00000375167 NOC2LQ9Y3T9 749 aaKnown RBP20.06■□□□□ 0.8
H2AFX-201ENST00000375167 ZBTB5O15062 677 aa20.05■□□□□ 0.8
H2AFX-201ENST00000375167 PPP1R11O60927 126 aaPredicted RBP20.05■□□□□ 0.8
H2AFX-201ENST00000375167 TRAF1Q13077 416 aa20.05■□□□□ 0.8
H2AFX-201ENST00000375167 C15orf39Q6ZRI6 1047 aa20.05■□□□□ 0.8
H2AFX-201ENST00000375167 NLRX1Q86UT6 975 aa20.05■□□□□ 0.8
H2AFX-201ENST00000375167 VPS52Q8N1B4 723 aa20.05■□□□□ 0.8
H2AFX-201ENST00000375167 DDX1Q92499 740 aaKnown RBP20.05■□□□□ 0.8
H2AFX-201ENST00000375167 STAMQ92783 540 aa20.05■□□□□ 0.8
H2AFX-201ENST00000375167 SHDQ96IW2 340 aa20.05■□□□□ 0.8
H2AFX-201ENST00000375167 ZBP1Q9H171 429 aa20.05■□□□□ 0.8
H2AFX-201ENST00000375167 IRAK3Q9Y616 596 aa20.05■□□□□ 0.8
H2AFX-201ENST00000375167 CEP295Q9C0D2 2601 aa20.04■□□□□ 0.8
H2AFX-201ENST00000375167 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.04■□□□□ 0.8
H2AFX-201ENST00000375167 SMIM35A0A1B0GVV1 85 aa20.04■□□□□ 0.8
H2AFX-201ENST00000375167 GSTTP1A0A1W2PQM5 241 aa20.04■□□□□ 0.8
H2AFX-201ENST00000375167 FGAP02671 866 aa20.04■□□□□ 0.8
H2AFX-201ENST00000375167 PMLP29590 882 aa20.04■□□□□ 0.8
H2AFX-201ENST00000375167 HAND2P61296 217 aa20.04■□□□□ 0.8
H2AFX-201ENST00000375167 FAM189BP81408 668 aa20.04■□□□□ 0.8
H2AFX-201ENST00000375167 SHC2P98077 582 aa20.04■□□□□ 0.8
H2AFX-201ENST00000375167 CCDC178Q5BJE1 867 aa20.04■□□□□ 0.8
H2AFX-201ENST00000375167 IQCA1Q86XH1 822 aa20.04■□□□□ 0.8
H2AFX-201ENST00000375167 AUTS2Q8WXX7 1259 aa20.04■□□□□ 0.8
H2AFX-201ENST00000375167 EPS15L1Q9UBC2 864 aa20.04■□□□□ 0.8
H2AFX-201ENST00000375167 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.04■□□□□ 0.8
H2AFX-201ENST00000375167 CNOT1A5YKK6 2376 aaKnown RBP20.04■□□□□ 0.8
H2AFX-201ENST00000375167 SOBPA7XYQ1 873 aa20.03■□□□□ 0.8
H2AFX-201ENST00000375167 LILRB5O75023 590 aa20.03■□□□□ 0.8
H2AFX-201ENST00000375167 N4BP1O75113 896 aaKnown RBP20.03■□□□□ 0.8
H2AFX-201ENST00000375167 LRRN2O75325 713 aa20.03■□□□□ 0.8
H2AFX-201ENST00000375167 PROS1P07225 676 aa20.03■□□□□ 0.8
H2AFX-201ENST00000375167 ALDH7A1P49419 539 aaKnown RBP20.03■□□□□ 0.8
H2AFX-201ENST00000375167 METAP2P50579 478 aaKnown RBP eCLIP20.03■□□□□ 0.86e-7■■■□□ 15
H2AFX-201ENST00000375167 TRAPPC12Q8WVT3 735 aa20.03■□□□□ 0.8
H2AFX-201ENST00000375167 RNF41Q9H4P4 317 aaPredicted RBP20.03■□□□□ 0.8
H2AFX-201ENST00000375167 RAB23Q9ULC3 237 aa20.03■□□□□ 0.8
H2AFX-201ENST00000375167 SPEM2Q0P670 501 aa20.02■□□□□ 0.8
H2AFX-201ENST00000375167 SLC2A4RGQ9NR83 387 aa20.02■□□□□ 0.8
H2AFX-201ENST00000375167 RNF19AQ9NV58 838 aa20.02■□□□□ 0.8
H2AFX-201ENST00000375167 ZMYM6O95789 1325 aa20.01■□□□□ 0.79
H2AFX-201ENST00000375167 LAMA4Q16363 1823 aa20.01■□□□□ 0.79
H2AFX-201ENST00000375167 CTSAP10619 480 aa20.01■□□□□ 0.79
H2AFX-201ENST00000375167 POLGP54098 1239 aaPredicted RBP20.01■□□□□ 0.79
H2AFX-201ENST00000375167 STARD6P59095 220 aa20.01■□□□□ 0.79
H2AFX-201ENST00000375167 PCNX4Q63HM2 1172 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms