RNA–Protein interactions for RNA: ENST00000374736.7

ABCA1-202, Transcript of ATP binding cassette subfamily A member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA1, Length 10,494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-202ENST00000374736 ARHGAP45Q92619 1136 aa9.34□□□□□ -0.91
ABCA1-202ENST00000374736 BORCS5Q969J3 196 aa9.34□□□□□ -0.91
ABCA1-202ENST00000374736 EHD3Q9NZN3 535 aa9.34□□□□□ -0.91
ABCA1-202ENST00000374736 ARHGAP31Q2M1Z3 1444 aa9.34□□□□□ -0.91
ABCA1-202ENST00000374736 TRIM49P0CI25 452 aa9.34□□□□□ -0.91
ABCA1-202ENST00000374736 TRIM49CP0CI26 452 aa9.34□□□□□ -0.91
ABCA1-202ENST00000374736 CCDC84Q86UT8 332 aaPredicted RBP9.34□□□□□ -0.91
ABCA1-202ENST00000374736 EDC3Q96F86 508 aaKnown RBP9.34□□□□□ -0.91
ABCA1-202ENST00000374736 ETNK1Q9HBU6 452 aa9.34□□□□□ -0.91
ABCA1-202ENST00000374736 STRN4Q9NRL3 753 aa9.34□□□□□ -0.91
ABCA1-202ENST00000374736 CYTH4Q9UIA0 394 aa9.34□□□□□ -0.91
ABCA1-202ENST00000374736 MARK3P27448 753 aa9.34□□□□□ -0.91
ABCA1-202ENST00000374736 LGALS3BPQ08380 585 aa9.34□□□□□ -0.91
ABCA1-202ENST00000374736 TMEM53Q6P2H8 277 aa9.34□□□□□ -0.91
ABCA1-202ENST00000374736 PCDHGA4Q9Y5G9 962 aa9.34□□□□□ -0.91
ABCA1-202ENST00000374736 SLC12A2P55011 1212 aa9.34□□□□□ -0.91
ABCA1-202ENST00000374736 RAB25P57735 213 aa9.34□□□□□ -0.91
ABCA1-202ENST00000374736 C1orf228Q6PIY5 440 aa9.34□□□□□ -0.91
ABCA1-202ENST00000374736 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.34□□□□□ -0.91
ABCA1-202ENST00000374736 RNF123Q5XPI4 1314 aa9.34□□□□□ -0.91
ABCA1-202ENST00000374736 CCDC22O60826 627 aa9.34□□□□□ -0.91
ABCA1-202ENST00000374736 SKAP2O75563 359 aaPredicted RBP9.34□□□□□ -0.91
ABCA1-202ENST00000374736 PSMC6P62333 389 aa9.34□□□□□ -0.91
ABCA1-202ENST00000374736 PPIDQ08752 370 aaKnown RBP9.34□□□□□ -0.91
ABCA1-202ENST00000374736 HSP90AA4PQ58FG1 418 aa9.34□□□□□ -0.91
ABCA1-202ENST00000374736 PANK1Q8TE04 598 aa9.34□□□□□ -0.91
ABCA1-202ENST00000374736 AGAP3Q96P47 875 aa9.34□□□□□ -0.91
ABCA1-202ENST00000374736 RETREG1Q9H6L5 497 aa9.34□□□□□ -0.91
ABCA1-202ENST00000374736 C9orf78Q9NZ63 289 aaPredicted RBP9.34□□□□□ -0.91
ABCA1-202ENST00000374736 POLR1AO95602 1720 aaPredicted RBP9.34□□□□□ -0.91
ABCA1-202ENST00000374736 SEMA3EO15041 775 aa9.34□□□□□ -0.91
ABCA1-202ENST00000374736 H2AFXP16104 143 aaPredicted RBP9.34□□□□□ -0.91
ABCA1-202ENST00000374736 EMC2Q15006 297 aa9.34□□□□□ -0.91
ABCA1-202ENST00000374736 SLC44A2Q8IWA5 706 aaPredicted RBP9.34□□□□□ -0.91
ABCA1-202ENST00000374736 CCT6BQ92526 530 aa9.34□□□□□ -0.91
ABCA1-202ENST00000374736 GMIPQ9P107 970 aa9.34□□□□□ -0.91
ABCA1-202ENST00000374736 LRRIQ4A6NIV6 560 aa9.34□□□□□ -0.91
ABCA1-202ENST00000374736 FDPSP14324 419 aaKnown RBP9.34□□□□□ -0.91
ABCA1-202ENST00000374736 CNDP1Q96KN2 507 aa9.34□□□□□ -0.91
ABCA1-202ENST00000374736 C9IYK1 514 aa9.33□□□□□ -0.92
ABCA1-202ENST00000374736 FARP2O94887 1054 aaPredicted RBP9.33□□□□□ -0.92
ABCA1-202ENST00000374736 ZNF806P0C7X5 589 aa9.33□□□□□ -0.92
ABCA1-202ENST00000374736 DSTNP60981 165 aa9.33□□□□□ -0.92
ABCA1-202ENST00000374736 DNAL1Q4LDG9 190 aa9.33□□□□□ -0.92
ABCA1-202ENST00000374736 C6orf10Q5SRN2 563 aa9.33□□□□□ -0.92
ABCA1-202ENST00000374736 NAA35Q5VZE5 725 aa9.33□□□□□ -0.92
ABCA1-202ENST00000374736 TRIM56Q9BRZ2 755 aaKnown RBP9.33□□□□□ -0.92
ABCA1-202ENST00000374736 MLXQ9UH92 298 aa9.33□□□□□ -0.92
ABCA1-202ENST00000374736 GJA1P17302 382 aa9.33□□□□□ -0.92
ABCA1-202ENST00000374736 METTL6Q8TCB7 284 aa9.33□□□□□ -0.92
ABCA1-202ENST00000374736 PDS5AQ29RF7 1337 aaKnown RBP9.33□□□□□ -0.92
ABCA1-202ENST00000374736 SMCO2A6NFE2 343 aa9.33□□□□□ -0.92
ABCA1-202ENST00000374736 SAC3D1A6NKF1 404 aa9.33□□□□□ -0.92
ABCA1-202ENST00000374736 TMCC2O75069 709 aa9.33□□□□□ -0.92
ABCA1-202ENST00000374736 PDE6AP16499 860 aa9.33□□□□□ -0.92
ABCA1-202ENST00000374736 RESTQ13127 1097 aa9.33□□□□□ -0.92
ABCA1-202ENST00000374736 TTLL12Q14166 644 aaPredicted RBP9.33□□□□□ -0.92
ABCA1-202ENST00000374736 RPRD1BQ9NQG5 326 aaKnown RBP9.33□□□□□ -0.92
ABCA1-202ENST00000374736 HAUS2Q9NVX0 235 aa9.33□□□□□ -0.92
ABCA1-202ENST00000374736 RAD51BO15315 384 aa9.33□□□□□ -0.92
ABCA1-202ENST00000374736 ATG16L1Q676U5 607 aa9.33□□□□□ -0.92
ABCA1-202ENST00000374736 TRIM67Q6ZTA4 783 aa9.33□□□□□ -0.92
ABCA1-202ENST00000374736 ANKRD35Q8N283 1001 aa9.33□□□□□ -0.92
ABCA1-202ENST00000374736 FAM161BQ96MY7 647 aa9.33□□□□□ -0.92
ABCA1-202ENST00000374736 MARCH7Q9H992 704 aa9.33□□□□□ -0.92
ABCA1-202ENST00000374736 ZMYM4Q5VZL5 1548 aa9.33□□□□□ -0.92
ABCA1-202ENST00000374736 UNC13DQ70J99 1090 aa9.33□□□□□ -0.92
ABCA1-202ENST00000374736 MED30Q96HR3 178 aa9.33□□□□□ -0.92
ABCA1-202ENST00000374736 NUDT12Q9BQG2 462 aa9.33□□□□□ -0.92
ABCA1-202ENST00000374736 WASLO00401 505 aaPredicted RBP9.33□□□□□ -0.92
ABCA1-202ENST00000374736 DLGAP3O95886 979 aa9.33□□□□□ -0.92
ABCA1-202ENST00000374736 CYP2U1Q7Z449 544 aa9.33□□□□□ -0.92
ABCA1-202ENST00000374736 MDM2Q00987 491 aaPredicted RBP9.33□□□□□ -0.92
ABCA1-202ENST00000374736 TOMM20Q15388 145 aa9.33□□□□□ -0.92
ABCA1-202ENST00000374736 PHF21AQ96BD5 680 aa9.33□□□□□ -0.92
ABCA1-202ENST00000374736 PPWD1Q96BP3 646 aaKnown RBP9.33□□□□□ -0.92
ABCA1-202ENST00000374736 ZNF184Q99676 751 aaPredicted RBP9.33□□□□□ -0.92
ABCA1-202ENST00000374736 DACT1Q9NYF0 836 aa9.33□□□□□ -0.92
ABCA1-202ENST00000374736 NUTM2BA6NNL0 878 aaPredicted RBP9.33□□□□□ -0.92
ABCA1-202ENST00000374736 NUTM2EB1AL46 878 aaPredicted RBP9.33□□□□□ -0.92
ABCA1-202ENST00000374736 CHRNA3P32297 505 aa9.33□□□□□ -0.92
ABCA1-202ENST00000374736 FAM76BQ5HYJ3 339 aa9.33□□□□□ -0.92
ABCA1-202ENST00000374736 HEXDCQ8WVB3 486 aa9.33□□□□□ -0.92
ABCA1-202ENST00000374736 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.33□□□□□ -0.92
ABCA1-202ENST00000374736 AGAP9Q5VTM2 703 aa9.32□□□□□ -0.92
ABCA1-202ENST00000374736 ARHGEF16Q5VV41 709 aa9.32□□□□□ -0.92
ABCA1-202ENST00000374736 MIS18BP1Q6P0N0 1132 aa9.32□□□□□ -0.92
ABCA1-202ENST00000374736 CENPUQ71F23 418 aa9.32□□□□□ -0.92
ABCA1-202ENST00000374736 TRPM8Q7Z2W7 1104 aa9.32□□□□□ -0.92
ABCA1-202ENST00000374736 TTC30AQ86WT1 665 aa9.32□□□□□ -0.92
ABCA1-202ENST00000374736 VANGL2Q9ULK5 521 aa9.32□□□□□ -0.92
ABCA1-202ENST00000374736 CCDC154A6NI56 674 aa9.32□□□□□ -0.92
ABCA1-202ENST00000374736 KCNQ3O43525 872 aa9.32□□□□□ -0.92
ABCA1-202ENST00000374736 YAP1P46937 504 aaKnown RBP9.32□□□□□ -0.92
ABCA1-202ENST00000374736 UBE3AQ05086 875 aa9.32□□□□□ -0.92
ABCA1-202ENST00000374736 MARCH10Q8NA82 808 aaPredicted RBP9.32□□□□□ -0.92
ABCA1-202ENST00000374736 SCFD1Q8WVM8 642 aa9.32□□□□□ -0.92
ABCA1-202ENST00000374736 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.32□□□□□ -0.92
ABCA1-202ENST00000374736 CCT8L1PA6NM43 557 aa9.32□□□□□ -0.92
ABCA1-202ENST00000374736 ATP6V1G2O95670 118 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms