RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 MARSP56192 900 aaKnown RBP18.62■□□□□ 0.57
RXRB-201ENST00000374680 PPP4R3CPQ6ZMV5 832 aa18.62■□□□□ 0.57
RXRB-201ENST00000374680 SIX2Q9NPC8 291 aa18.62■□□□□ 0.57
RXRB-201ENST00000374680 DNAJC12Q9UKB3 198 aa18.62■□□□□ 0.57
RXRB-201ENST00000374680 SLX4Q8IY92 1834 aa18.62■□□□□ 0.57
RXRB-201ENST00000374680 GOLGA8IPA6NC78 632 aa18.61■□□□□ 0.57
RXRB-201ENST00000374680 SPDYE2BA6NHP3 402 aa18.61■□□□□ 0.57
RXRB-201ENST00000374680 GOLGA8JA6NMD2 632 aa18.61■□□□□ 0.57
RXRB-201ENST00000374680 RBAK-RBAKDNI3L0D1 243 aa18.61■□□□□ 0.57
RXRB-201ENST00000374680 IPO5O00410 1097 aaKnown RBP18.61■□□□□ 0.57
RXRB-201ENST00000374680 DDX3XO00571 662 aaKnown RBP eCLIP18.61■□□□□ 0.57
RXRB-201ENST00000374680 EVI5O60447 810 aa18.61■□□□□ 0.57
RXRB-201ENST00000374680 PSMD10O75832 226 aa18.61■□□□□ 0.57
RXRB-201ENST00000374680 SPDYE6P0CI01 402 aa18.61■□□□□ 0.57
RXRB-201ENST00000374680 ALAS1P13196 640 aa18.61■□□□□ 0.57
RXRB-201ENST00000374680 ITGA4P13612 1032 aa18.61■□□□□ 0.57
RXRB-201ENST00000374680 CIITAP33076 1130 aa18.61■□□□□ 0.57
RXRB-201ENST00000374680 SP4Q02446 784 aa18.61■□□□□ 0.57
RXRB-201ENST00000374680 EN1Q05925 392 aaPredicted RBP18.61■□□□□ 0.57
RXRB-201ENST00000374680 DRAP1Q14919 205 aaPredicted RBP18.61■□□□□ 0.57
RXRB-201ENST00000374680 NBPF9Q3BBW0 867 aa18.61■□□□□ 0.57
RXRB-201ENST00000374680 DPY19L2P1Q6NXN4 242 aa18.61■□□□□ 0.57
RXRB-201ENST00000374680 MOXD1Q6UVY6 613 aa18.61■□□□□ 0.57
RXRB-201ENST00000374680 CNKSR1Q969H4 720 aa18.61■□□□□ 0.57
RXRB-201ENST00000374680 FAM84AQ96KN4 292 aa18.61■□□□□ 0.57
RXRB-201ENST00000374680 ACP6Q9NPH0 428 aa18.61■□□□□ 0.57
RXRB-201ENST00000374680 ARHGEF35A5YM69 484 aa18.61■□□□□ 0.57
RXRB-201ENST00000374680 PRLRP16471 622 aa18.61■□□□□ 0.57
RXRB-201ENST00000374680 DLG4P78352 724 aa18.61■□□□□ 0.57
RXRB-201ENST00000374680 PALB2Q86YC2 1186 aa18.61■□□□□ 0.57
RXRB-201ENST00000374680 GOLGA5Q8TBA6 731 aa18.61■□□□□ 0.57
RXRB-201ENST00000374680 CASKIN2Q8WXE0 1202 aa18.61■□□□□ 0.57
RXRB-201ENST00000374680 SYN2Q92777 582 aaPredicted RBP18.61■□□□□ 0.57
RXRB-201ENST00000374680 TMEM110-MUSTN1A8MSY1 372 aa18.6■□□□□ 0.57
RXRB-201ENST00000374680 ENTPD3O75355 529 aa18.6■□□□□ 0.57
RXRB-201ENST00000374680 MYCLP12524 364 aaPredicted RBP18.6■□□□□ 0.57
RXRB-201ENST00000374680 PRELPP51888 382 aa18.6■□□□□ 0.57
RXRB-201ENST00000374680 HDLBPQ00341 1268 aaKnown RBP18.6■□□□□ 0.57
RXRB-201ENST00000374680 ZNF746Q6NUN9 644 aaPredicted RBP18.6■□□□□ 0.57
RXRB-201ENST00000374680 HS2ST1Q7LGA3 356 aa18.6■□□□□ 0.57
RXRB-201ENST00000374680 PEX26Q7Z412 305 aa18.6■□□□□ 0.57
RXRB-201ENST00000374680 FAM76AQ8TAV0 307 aa18.6■□□□□ 0.57
RXRB-201ENST00000374680 GOPCQ9HD26 462 aa18.6■□□□□ 0.57
RXRB-201ENST00000374680 GPRC5CQ9NQ84 441 aa18.6■□□□□ 0.57
RXRB-201ENST00000374680 TAS2R14Q9NYV8 317 aa18.6■□□□□ 0.57
RXRB-201ENST00000374680 CCPG1Q9ULG6 757 aa18.6■□□□□ 0.57
RXRB-201ENST00000374680 FZD1Q9UP38 647 aa18.6■□□□□ 0.57
RXRB-201ENST00000374680 HIP1RO75146 1068 aa18.6■□□□□ 0.57
RXRB-201ENST00000374680 PSMC2P35998 433 aaKnown RBP18.6■□□□□ 0.57
RXRB-201ENST00000374680 ZIM3Q96PE6 472 aa18.6■□□□□ 0.57
RXRB-201ENST00000374680 POLR3CQ9BUI4 534 aaPredicted RBP18.6■□□□□ 0.57
RXRB-201ENST00000374680 ZNF341Q9BYN7 854 aa18.6■□□□□ 0.57
RXRB-201ENST00000374680 COL20A1Q9P218 1284 aa18.6■□□□□ 0.57
RXRB-201ENST00000374680 TMX2Q9Y320 296 aa18.6■□□□□ 0.57
RXRB-201ENST00000374680 H2AFZP0C0S5 128 aa18.6■□□□□ 0.57
RXRB-201ENST00000374680 EIF2AK2P19525 551 aaKnown RBP18.6■□□□□ 0.57
RXRB-201ENST00000374680 GALCP54803 685 aa18.6■□□□□ 0.57
RXRB-201ENST00000374680 TAF3Q5VWG9 929 aa18.6■□□□□ 0.57
RXRB-201ENST00000374680 H2AFVQ71UI9 128 aa18.6■□□□□ 0.57
RXRB-201ENST00000374680 VIPAS39Q9H9C1 493 aa18.6■□□□□ 0.57
RXRB-201ENST00000374680 RAVER2Q9HCJ3 691 aaKnown RBP18.6■□□□□ 0.57
RXRB-201ENST00000374680 ITGB5P18084 799 aa18.59■□□□□ 0.57
RXRB-201ENST00000374680 ZNF211Q13398 564 aaPredicted RBP18.59■□□□□ 0.57
RXRB-201ENST00000374680 MKRN4PQ13434 485 aaPredicted RBP18.59■□□□□ 0.57
RXRB-201ENST00000374680 ZNF720Q7Z2F6 126 aa18.59■□□□□ 0.57
RXRB-201ENST00000374680 METTL13Q8N6R0 699 aa18.59■□□□□ 0.57
RXRB-201ENST00000374680 OR2W6PQ8NHA6 318 aa18.59■□□□□ 0.57
RXRB-201ENST00000374680 PPP1R1BQ9UD71 204 aaPredicted RBP18.59■□□□□ 0.57
RXRB-201ENST00000374680 K7ENM7 598 aa18.59■□□□□ 0.57
RXRB-201ENST00000374680 HSF2BPO75031 334 aa18.59■□□□□ 0.57
RXRB-201ENST00000374680 FLOT1O75955 427 aa18.59■□□□□ 0.57
RXRB-201ENST00000374680 KIF4AO95239 1232 aa18.59■□□□□ 0.57
RXRB-201ENST00000374680 STAT1P42224 750 aa18.59■□□□□ 0.57
RXRB-201ENST00000374680 AARSP49588 968 aaKnown RBP eCLIP18.59■□□□□ 0.57
RXRB-201ENST00000374680 BTNL9Q6UXG8 535 aa18.59■□□□□ 0.57
RXRB-201ENST00000374680 IFT20Q8IY31 132 aa18.59■□□□□ 0.57
RXRB-201ENST00000374680 CHURC1Q8WUH1 139 aa18.59■□□□□ 0.57
RXRB-201ENST00000374680 CELF4Q9BZC1 486 aaKnown RBP18.59■□□□□ 0.57
RXRB-201ENST00000374680 FRMD4BQ9Y2L6 1034 aa18.59■□□□□ 0.57
RXRB-201ENST00000374680 PCDHGC5Q9Y5F6 944 aa18.59■□□□□ 0.57
RXRB-201ENST00000374680 ZEB2O60315 1214 aa18.58■□□□□ 0.57
RXRB-201ENST00000374680 GCLMP48507 274 aa18.58■□□□□ 0.57
RXRB-201ENST00000374680 FMO5P49326 533 aa18.58■□□□□ 0.57
RXRB-201ENST00000374680 EPHB4P54760 987 aa18.58■□□□□ 0.57
RXRB-201ENST00000374680 LNX1Q8TBB1 728 aaPredicted RBP18.58■□□□□ 0.57
RXRB-201ENST00000374680 C7orf43Q8WVR3 580 aa18.58■□□□□ 0.57
RXRB-201ENST00000374680 INPP4AQ96PE3 977 aaPredicted RBP18.58■□□□□ 0.57
RXRB-201ENST00000374680 MRIQ9BWK5 157 aa18.58■□□□□ 0.57
RXRB-201ENST00000374680 AGPAT3Q9NRZ7 376 aa18.58■□□□□ 0.57
RXRB-201ENST00000374680 AMACRQ9UHK6 382 aa18.58■□□□□ 0.57
RXRB-201ENST00000374680 ZMYM2Q9UBW7 1377 aa18.58■□□□□ 0.57
RXRB-201ENST00000374680 LTBP1Q14766 1721 aa18.58■□□□□ 0.56
RXRB-201ENST00000374680 FOCADQ5VW36 1801 aa18.58■□□□□ 0.56
RXRB-201ENST00000374680 PPP1R12BO60237 982 aaPredicted RBP18.58■□□□□ 0.56
RXRB-201ENST00000374680 SOX10P56693 466 aa18.58■□□□□ 0.56
RXRB-201ENST00000374680 IRX5P78411 483 aaPredicted RBP18.58■□□□□ 0.56
RXRB-201ENST00000374680 MAATS1Q7Z4T9 603 aa18.58■□□□□ 0.56
RXRB-201ENST00000374680 KIFC3Q9BVG8 833 aa18.58■□□□□ 0.56
RXRB-201ENST00000374680 METTL14Q9HCE5 456 aaKnown RBP18.58■□□□□ 0.56
RXRB-201ENST00000374680 CFAP58Q5T655 872 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms