RNA–Protein interactions for RNA: ENST00000373645.3

SP140-202, Transcript of SP140 nuclear body protein, humanhuman

TSL 1 (best) BASIC

Gene SP140, Length 814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-202ENST00000373645 SMAD2Q15796 467 aaKnown RBP8.72□□□□□ -1.01
SP140-202ENST00000373645 PUS10Q3MIT2 529 aaKnown RBP8.72□□□□□ -1.01
SP140-202ENST00000373645 RILPL1Q5EBL4 403 aa8.72□□□□□ -1.01
SP140-202ENST00000373645 EARS2Q5JPH6 523 aaKnown RBP8.72□□□□□ -1.01
SP140-202ENST00000373645 FAM173BQ6P4H8 233 aa8.72□□□□□ -1.01
SP140-202ENST00000373645 RUFY4Q6ZNE9 571 aa8.72□□□□□ -1.01
SP140-202ENST00000373645 ADGRD2Q7Z7M1 963 aa8.72□□□□□ -1.01
SP140-202ENST00000373645 FCHSD1Q86WN1 690 aa8.72□□□□□ -1.01
SP140-202ENST00000373645 RNF135Q8IUD6 432 aa8.72□□□□□ -1.01
SP140-202ENST00000373645 RASGRP4Q8TDF6 673 aa8.72□□□□□ -1.01
SP140-202ENST00000373645 LMBR1Q8WVP7 490 aa8.72□□□□□ -1.01
SP140-202ENST00000373645 SEPT8Q92599 483 aa8.72□□□□□ -1.01
SP140-202ENST00000373645 ZBTB10Q96DT7 871 aa8.72□□□□□ -1.01
SP140-202ENST00000373645 IGFLR1Q9H665 355 aa8.72□□□□□ -1.01
SP140-202ENST00000373645 TUT1Q9H6E5 874 aaKnown RBP8.72□□□□□ -1.01
SP140-202ENST00000373645 EHMT1Q9H9B1 1298 aa8.72□□□□□ -1.01
SP140-202ENST00000373645 ALG13Q9NP73 1137 aaKnown RBP8.72□□□□□ -1.01
SP140-202ENST00000373645 TFIP11Q9UBB9 837 aaKnown RBP8.72□□□□□ -1.01
SP140-202ENST00000373645 PRKAG3Q9UGI9 489 aa8.72□□□□□ -1.01
SP140-202ENST00000373645 CFAP45Q9UL16 551 aa8.72□□□□□ -1.01
SP140-202ENST00000373645 NOL7Q9UMY1 257 aaKnown RBP8.72□□□□□ -1.01
SP140-202ENST00000373645 KIAA1671Q9BY89 1806 aa8.71□□□□□ -1.01
SP140-202ENST00000373645 KMT2EQ8IZD2 1858 aa8.71□□□□□ -1.01
SP140-202ENST00000373645 SPDYE3A6NKU9 549 aa8.71□□□□□ -1.02
SP140-202ENST00000373645 C5orf67F2Z3F1 127 aa8.71□□□□□ -1.02
SP140-202ENST00000373645 CHRNA1P02708 482 aa8.71□□□□□ -1.02
SP140-202ENST00000373645 DNAJB1P25685 340 aa8.71□□□□□ -1.02
SP140-202ENST00000373645 PSEN1P49768 467 aa8.71□□□□□ -1.02
SP140-202ENST00000373645 USP11P51784 963 aa8.71□□□□□ -1.02
SP140-202ENST00000373645 KRT85P78386 507 aa8.71□□□□□ -1.02
SP140-202ENST00000373645 RBM10P98175 930 aaKnown RBP8.71□□□□□ -1.02
SP140-202ENST00000373645 SP4Q02446 784 aa8.71□□□□□ -1.02
SP140-202ENST00000373645 DNM1Q05193 864 aaKnown RBP8.71□□□□□ -1.02
SP140-202ENST00000373645 INF2Q27J81 1249 aa8.71□□□□□ -1.02
SP140-202ENST00000373645 FOXD4L6Q3SYB3 417 aaPredicted RBP8.71□□□□□ -1.02
SP140-202ENST00000373645 HERC4Q5GLZ8 1057 aaPredicted RBP8.71□□□□□ -1.02
SP140-202ENST00000373645 FOXD4L3Q6VB84 417 aaPredicted RBP8.71□□□□□ -1.02
SP140-202ENST00000373645 VSIG10LQ86VR7 867 aa8.71□□□□□ -1.02
SP140-202ENST00000373645 TBCKQ8TEA7 893 aa8.71□□□□□ -1.02
SP140-202ENST00000373645 LINC01599Q8WXQ3 324 aa8.71□□□□□ -1.02
SP140-202ENST00000373645 PGBD1Q96JS3 809 aa8.71□□□□□ -1.02
SP140-202ENST00000373645 SAMD11Q96NU1 681 aa8.71□□□□□ -1.02
SP140-202ENST00000373645 GBP4Q96PP9 640 aa8.71□□□□□ -1.02
SP140-202ENST00000373645 NAP1L4Q99733 375 aaKnown RBP8.71□□□□□ -1.02
SP140-202ENST00000373645 ANO3Q9BYT9 981 aa8.71□□□□□ -1.02
SP140-202ENST00000373645 FAM86C1Q9NVL1 165 aa8.71□□□□□ -1.02
SP140-202ENST00000373645 ADGRA3Q8IWK6 1321 aa8.71□□□□□ -1.02
SP140-202ENST00000373645 PTPRZ1P23471 2315 aaPredicted RBP8.71□□□□□ -1.02
SP140-202ENST00000373645 TTC3P53804 2025 aa8.71□□□□□ -1.02
SP140-202ENST00000373645 CFAP54Q96N23 3096 aa8.71□□□□□ -1.02
SP140-202ENST00000373645 BAG4O95429 457 aaKnown RBP8.7□□□□□ -1.02
SP140-202ENST00000373645 GLP2RO95838 553 aa8.7□□□□□ -1.02
SP140-202ENST00000373645 CYP3A4P08684 503 aa8.7□□□□□ -1.02
SP140-202ENST00000373645 NCLP19338 710 aaKnown RBP8.7□□□□□ -1.02
SP140-202ENST00000373645 ATP2B1P20020 1258 aa8.7□□□□□ -1.02
SP140-202ENST00000373645 BMPR1AP36894 532 aa8.7□□□□□ -1.02
SP140-202ENST00000373645 GATMP50440 423 aa8.7□□□□□ -1.02
SP140-202ENST00000373645 TOB1P50616 345 aaPredicted RBP8.7□□□□□ -1.02
SP140-202ENST00000373645 ADAM17P78536 824 aa8.7□□□□□ -1.02
SP140-202ENST00000373645 MRPS9P82933 396 aaKnown RBP8.7□□□□□ -1.02
SP140-202ENST00000373645 TCF15Q12870 199 aa8.7□□□□□ -1.02
SP140-202ENST00000373645 SMAD4Q13485 552 aaKnown RBP8.7□□□□□ -1.02
SP140-202ENST00000373645 LPIN1Q14693 890 aa8.7□□□□□ -1.02
SP140-202ENST00000373645 TTC38Q5R3I4 469 aa8.7□□□□□ -1.02
SP140-202ENST00000373645 UTP14CQ5TAP6 766 aaKnown RBP8.7□□□□□ -1.02
SP140-202ENST00000373645 CYFIP1Q7L576 1253 aa8.7□□□□□ -1.02
SP140-202ENST00000373645 NEK8Q86SG6 692 aa8.7□□□□□ -1.02
SP140-202ENST00000373645 FIBCD1Q8N539 461 aa8.7□□□□□ -1.02
SP140-202ENST00000373645 MSLNLQ96KJ4 702 aa8.7□□□□□ -1.02
SP140-202ENST00000373645 USP28Q96RU2 1077 aa8.7□□□□□ -1.02
SP140-202ENST00000373645 C11orf84Q9BUA3 381 aaPredicted RBP8.7□□□□□ -1.02
SP140-202ENST00000373645 SCAND2PQ9GZW5 306 aaPredicted RBP8.7□□□□□ -1.02
SP140-202ENST00000373645 MLXIPQ9HAP2 919 aa8.7□□□□□ -1.02
SP140-202ENST00000373645 RTEL1Q9NZ71 1219 aa8.7□□□□□ -1.02
SP140-202ENST00000373645 CLEC1BQ9P126 229 aa8.7□□□□□ -1.02
SP140-202ENST00000373645 BARX2Q9UMQ3 279 aaPredicted RBP8.7□□□□□ -1.02
SP140-202ENST00000373645 PCDHB6Q9Y5E3 794 aa8.7□□□□□ -1.02
SP140-202ENST00000373645 MRPL42Q9Y6G3 142 aaKnown RBP8.7□□□□□ -1.02
SP140-202ENST00000373645 USP34Q70CQ2 3546 aa8.69□□□□□ -1.02
SP140-202ENST00000373645 TMEM221A6NGB7 291 aa8.69□□□□□ -1.02
SP140-202ENST00000373645 M0R296 226 aa8.69□□□□□ -1.02
SP140-202ENST00000373645 YEATS4O95619 227 aa8.69□□□□□ -1.02
SP140-202ENST00000373645 BMP15O95972 392 aa8.69□□□□□ -1.02
SP140-202ENST00000373645 ITGB1P05556 798 aa8.69□□□□□ -1.02
SP140-202ENST00000373645 GCFC2P16383 781 aaKnown RBP8.69□□□□□ -1.02
SP140-202ENST00000373645 CCND2P30279 289 aa8.69□□□□□ -1.02
SP140-202ENST00000373645 CIITAP33076 1130 aa8.69□□□□□ -1.02
SP140-202ENST00000373645 SREBF1P36956 1147 aa8.69□□□□□ -1.02
SP140-202ENST00000373645 NASPP49321 788 aaPredicted RBP8.69□□□□□ -1.02
SP140-202ENST00000373645 VCPP55072 806 aaKnown RBP8.69□□□□□ -1.02
SP140-202ENST00000373645 ARHGAP4P98171 946 aa8.69□□□□□ -1.02
SP140-202ENST00000373645 SF3A1Q15459 793 aaKnown RBP8.69□□□□□ -1.02
SP140-202ENST00000373645 ZNF174Q15697 407 aa8.69□□□□□ -1.02
SP140-202ENST00000373645 LETM2Q2VYF4 491 aa8.69□□□□□ -1.02
SP140-202ENST00000373645 PPP4R3AQ6IN85 833 aa8.69□□□□□ -1.02
SP140-202ENST00000373645 MOXD1Q6UVY6 613 aa8.69□□□□□ -1.02
SP140-202ENST00000373645 ZNF687Q8N1G0 1237 aa8.69□□□□□ -1.02
SP140-202ENST00000373645 LINC00301Q8NCQ3 95 aa8.69□□□□□ -1.02
SP140-202ENST00000373645 CRYGNQ8WXF5 182 aa8.69□□□□□ -1.02
SP140-202ENST00000373645 CLP1Q92989 425 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms