RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 RUBCNQ92622 972 aa15.23■□□□□ 0.03
LMX1B-202ENST00000373474 COX16Q9P0S2 106 aa15.23■□□□□ 0.03
LMX1B-202ENST00000373474 YIPF3Q9GZM5 350 aa15.23■□□□□ 0.03
LMX1B-202ENST00000373474 TARSL2A2RTX5 802 aaKnown RBP15.23■□□□□ 0.03
LMX1B-202ENST00000373474 NR3C1P04150 777 aa15.23■□□□□ 0.03
LMX1B-202ENST00000373474 ACTN1P12814 892 aa15.23■□□□□ 0.03
LMX1B-202ENST00000373474 STOX1Q6ZVD7 989 aa15.23■□□□□ 0.03
LMX1B-202ENST00000373474 SLC24A3Q9HC58 644 aa15.23■□□□□ 0.03
LMX1B-202ENST00000373474 FAM8A1Q9UBU6 413 aa15.23■□□□□ 0.03
LMX1B-202ENST00000373474 NMT2O60551 498 aa15.23■□□□□ 0.03
LMX1B-202ENST00000373474 MMEP08473 750 aa15.23■□□□□ 0.03
LMX1B-202ENST00000373474 ATP2C1P98194 919 aaPredicted RBP15.23■□□□□ 0.03
LMX1B-202ENST00000373474 FAM196AQ6ZSG2 479 aa15.23■□□□□ 0.03
LMX1B-202ENST00000373474 SRRM1Q8IYB3 904 aaKnown RBP15.23■□□□□ 0.03
LMX1B-202ENST00000373474 CFAP36Q96G28 342 aa15.23■□□□□ 0.03
LMX1B-202ENST00000373474 COA1Q9GZY4 146 aa15.23■□□□□ 0.03
LMX1B-202ENST00000373474 FBXO2Q9UK22 296 aaPredicted RBP15.23■□□□□ 0.03
LMX1B-202ENST00000373474 XPOTO43592 962 aaKnown RBP15.22■□□□□ 0.03
LMX1B-202ENST00000373474 KCNJ6P48051 423 aa15.22■□□□□ 0.03
LMX1B-202ENST00000373474 ART3Q13508 389 aa15.22■□□□□ 0.03
LMX1B-202ENST00000373474 SURF1Q15526 300 aa15.22■□□□□ 0.03
LMX1B-202ENST00000373474 ZC3H18Q86VM9 953 aaKnown RBP15.22■□□□□ 0.03
LMX1B-202ENST00000373474 SFR1Q86XK3 245 aa15.22■□□□□ 0.03
LMX1B-202ENST00000373474 BARHL2Q9NY43 387 aa15.22■□□□□ 0.03
LMX1B-202ENST00000373474 IQANK1A0A1B0GTG1 560 aa15.22■□□□□ 0.03
LMX1B-202ENST00000373474 NFRKBQ6P4R8 1299 aa15.22■□□□□ 0.03
LMX1B-202ENST00000373474 METTL16Q86W50 562 aaKnown RBP15.22■□□□□ 0.03
LMX1B-202ENST00000373474 TRAIPQ9BWF2 469 aa15.22■□□□□ 0.03
LMX1B-202ENST00000373474 USP31Q70CQ4 1352 aa15.22■□□□□ 0.03
LMX1B-202ENST00000373474 GOLGA8IPA6NC78 632 aa15.22■□□□□ 0.03
LMX1B-202ENST00000373474 GOLGA8JA6NMD2 632 aa15.22■□□□□ 0.03
LMX1B-202ENST00000373474 GSG1L2A8MUP6 293 aa15.22■□□□□ 0.03
LMX1B-202ENST00000373474 FOXN1O15353 648 aa15.22■□□□□ 0.03
LMX1B-202ENST00000373474 SNAP25P60880 206 aa15.22■□□□□ 0.03
LMX1B-202ENST00000373474 CCZ1BP86790 482 aa15.22■□□□□ 0.03
LMX1B-202ENST00000373474 CCZ1P86791 482 aaPredicted RBP15.22■□□□□ 0.03
LMX1B-202ENST00000373474 ISCA1Q9BUE6 129 aa15.22■□□□□ 0.03
LMX1B-202ENST00000373474 ZBBXA8MT70 800 aa15.22■□□□□ 0.03
LMX1B-202ENST00000373474 PSMD7P51665 324 aa15.22■□□□□ 0.03
LMX1B-202ENST00000373474 BIRC2Q13490 618 aa15.22■□□□□ 0.03
LMX1B-202ENST00000373474 GRAMD1BQ3KR37 738 aa15.22■□□□□ 0.03
LMX1B-202ENST00000373474 MYO3AQ8NEV4 1616 aa15.22■□□□□ 0.03
LMX1B-202ENST00000373474 TTC26A0AVF1 554 aa15.22■□□□□ 0.03
LMX1B-202ENST00000373474 ACSL3O95573 720 aa15.22■□□□□ 0.03
LMX1B-202ENST00000373474 OATP04181 439 aa15.22■□□□□ 0.03
LMX1B-202ENST00000373474 NAA30Q147X3 362 aaPredicted RBP15.22■□□□□ 0.03
LMX1B-202ENST00000373474 LLGL1Q15334 1064 aa15.22■□□□□ 0.03
LMX1B-202ENST00000373474 FOXP4Q8IVH2 680 aaPredicted RBP15.22■□□□□ 0.03
LMX1B-202ENST00000373474 CAPN11Q9UMQ6 739 aa15.22■□□□□ 0.03
LMX1B-202ENST00000373474 ZNF609O15014 1411 aa15.21■□□□□ 0.03
LMX1B-202ENST00000373474 SFI1A8K8P3 1242 aa15.21■□□□□ 0.03
LMX1B-202ENST00000373474 PRELPP51888 382 aa15.21■□□□□ 0.03
LMX1B-202ENST00000373474 KCNH2Q12809 1159 aa15.21■□□□□ 0.03
LMX1B-202ENST00000373474 TXNRD1Q16881 649 aa15.21■□□□□ 0.03
LMX1B-202ENST00000373474 TEDDM1Q5T9Z0 273 aa15.21■□□□□ 0.03
LMX1B-202ENST00000373474 TBC1D9BQ66K14 1250 aa15.21■□□□□ 0.03
LMX1B-202ENST00000373474 PDXDC1Q6P996 788 aa15.21■□□□□ 0.03
LMX1B-202ENST00000373474 TMEM179Q6ZVK1 233 aa15.21■□□□□ 0.03
LMX1B-202ENST00000373474 TMCO5AQ8N6Q1 288 aa15.21■□□□□ 0.03
LMX1B-202ENST00000373474 GIPC2Q8TF65 315 aa15.21■□□□□ 0.03
LMX1B-202ENST00000373474 TMEM60Q9H2L4 133 aa15.21■□□□□ 0.03
LMX1B-202ENST00000373474 LCMT1Q9UIC8 334 aa15.21■□□□□ 0.03
LMX1B-202ENST00000373474 GPC5P78333 572 aa15.21■□□□□ 0.03
LMX1B-202ENST00000373474 IFRD2Q12894 506 aaPredicted RBP15.21■□□□□ 0.03
LMX1B-202ENST00000373474 SLC38A10Q9HBR0 1119 aa15.21■□□□□ 0.03
LMX1B-202ENST00000373474 DCP1AQ9NPI6 582 aaPredicted RBP15.21■□□□□ 0.03
LMX1B-202ENST00000373474 HDAC6Q9UBN7 1215 aa15.21■□□□□ 0.03
LMX1B-202ENST00000373474 MINPP1Q9UNW1 487 aa15.21■□□□□ 0.03
LMX1B-202ENST00000373474 AKT3Q9Y243 479 aa15.21■□□□□ 0.03
LMX1B-202ENST00000373474 CAMSAP1Q5T5Y3 1602 aa15.21■□□□□ 0.03
LMX1B-202ENST00000373474 NCK2O43639 380 aa15.21■□□□□ 0.03
LMX1B-202ENST00000373474 TFAMQ00059 246 aaKnown RBP15.21■□□□□ 0.03
LMX1B-202ENST00000373474 MTERF2Q49AM1 385 aa15.21■□□□□ 0.03
LMX1B-202ENST00000373474 ZBTB33Q86T24 672 aa15.21■□□□□ 0.03
LMX1B-202ENST00000373474 PNPLA7Q6ZV29 1317 aa15.21■□□□□ 0.03
LMX1B-202ENST00000373474 IPO5O00410 1097 aaKnown RBP15.21■□□□□ 0.02
LMX1B-202ENST00000373474 TJP3O95049 919 aa15.21■□□□□ 0.02
LMX1B-202ENST00000373474 TBC1D1Q86TI0 1168 aaPredicted RBP15.21■□□□□ 0.02
LMX1B-202ENST00000373474 DEPDC1BQ8WUY9 529 aa15.21■□□□□ 0.02
LMX1B-202ENST00000373474 ELAC2Q9BQ52 826 aaKnown RBP15.21■□□□□ 0.02
LMX1B-202ENST00000373474 MRPL40Q9NQ50 206 aaKnown RBP15.21■□□□□ 0.02
LMX1B-202ENST00000373474 RASSF10A6NK89 507 aa15.21■□□□□ 0.02
LMX1B-202ENST00000373474 CASP2P42575 452 aa15.21■□□□□ 0.02
LMX1B-202ENST00000373474 PMS2P54278 862 aa15.21■□□□□ 0.02
LMX1B-202ENST00000373474 CAV1Q03135 178 aa15.21■□□□□ 0.02
LMX1B-202ENST00000373474 IQCB1Q15051 598 aa15.21■□□□□ 0.02
LMX1B-202ENST00000373474 PYROXD1Q8WU10 500 aa15.21■□□□□ 0.02
LMX1B-202ENST00000373474 NBPF3Q9H094 633 aa15.21■□□□□ 0.02
LMX1B-202ENST00000373474 LIMA1Q9UHB6 759 aaKnown RBP15.21■□□□□ 0.02
LMX1B-202ENST00000373474 SRP68Q9UHB9 627 aaKnown RBP15.21■□□□□ 0.02
LMX1B-202ENST00000373474 PRPSAP2O60256 369 aa15.2■□□□□ 0.02
LMX1B-202ENST00000373474 ATP1A1P05023 1023 aaKnown RBP15.2■□□□□ 0.02
LMX1B-202ENST00000373474 HDAC4P56524 1084 aa15.2■□□□□ 0.02
LMX1B-202ENST00000373474 FAM83BQ5T0W9 1011 aa15.2■□□□□ 0.02
LMX1B-202ENST00000373474 SLFN12LQ6IEE8 588 aa15.2■□□□□ 0.02
LMX1B-202ENST00000373474 CALN1Q9BXU9 219 aa15.2■□□□□ 0.02
LMX1B-202ENST00000373474 SNX25Q9H3E2 840 aa15.2■□□□□ 0.02
LMX1B-202ENST00000373474 SNX24Q9Y343 169 aa15.2■□□□□ 0.02
LMX1B-202ENST00000373474 INO80B-WBP1J3KQ70 363 aa15.2■□□□□ 0.02
LMX1B-202ENST00000373474 ARL4AP40617 200 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms