RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 FIGNQ5HY92 759 aa8.92□□□□□ -0.98
GARNL3-201ENST00000373386 FIP1L1Q6UN15 594 aaKnown RBP8.92□□□□□ -0.98
GARNL3-201ENST00000373386 DTHD1Q6ZMT9 781 aa8.92□□□□□ -0.98
GARNL3-201ENST00000373386 KRT25Q7Z3Z0 450 aa8.92□□□□□ -0.98
GARNL3-201ENST00000373386 GIMAP8Q8ND71 665 aaPredicted RBP8.92□□□□□ -0.98
GARNL3-201ENST00000373386 LILRB1Q8NHL6 650 aaPredicted RBP8.92□□□□□ -0.98
GARNL3-201ENST00000373386 GRAPLQ8TC17 118 aaPredicted RBP8.92□□□□□ -0.98
GARNL3-201ENST00000373386 DYDC1Q8WWB3 177 aa8.92□□□□□ -0.98
GARNL3-201ENST00000373386 DNAJC7Q99615 494 aa8.92□□□□□ -0.98
GARNL3-201ENST00000373386 NUP58Q9BVL2 599 aa8.92□□□□□ -0.98
GARNL3-201ENST00000373386 SQORQ9Y6N5 450 aa8.92□□□□□ -0.98
GARNL3-201ENST00000373386 CYP2D7A0A087X1C5 515 aa8.91□□□□□ -0.98
GARNL3-201ENST00000373386 TMEM247A6NEH6 219 aa8.91□□□□□ -0.98
GARNL3-201ENST00000373386 ADRA2BP18089 450 aa8.91□□□□□ -0.98
GARNL3-201ENST00000373386 RRAGBQ5VZM2 374 aa8.91□□□□□ -0.98
GARNL3-201ENST00000373386 BZW1Q7L1Q6 419 aaKnown RBP8.91□□□□□ -0.98
GARNL3-201ENST00000373386 SMYD4Q8IYR2 804 aaPredicted RBP8.91□□□□□ -0.98
GARNL3-201ENST00000373386 TNIP2Q8NFZ5 429 aa8.91□□□□□ -0.98
GARNL3-201ENST00000373386 MRRFQ96E11 262 aaKnown RBP8.91□□□□□ -0.98
GARNL3-201ENST00000373386 NAF1Q96HR8 494 aaKnown RBP8.91□□□□□ -0.98
GARNL3-201ENST00000373386 MKL2Q9ULH7 1088 aa8.91□□□□□ -0.98
GARNL3-201ENST00000373386 PCDHA6Q9UN73 950 aa8.91□□□□□ -0.98
GARNL3-201ENST00000373386 PCDHA8Q9Y5H6 950 aa8.91□□□□□ -0.98
GARNL3-201ENST00000373386 KCNJ18B7U540 433 aa8.91□□□□□ -0.98
GARNL3-201ENST00000373386 STXBP3O00186 592 aa8.91□□□□□ -0.98
GARNL3-201ENST00000373386 LDHBP07195 334 aaKnown RBP8.91□□□□□ -0.98
GARNL3-201ENST00000373386 CCDC166P0CW27 439 aa8.91□□□□□ -0.98
GARNL3-201ENST00000373386 IBSPP21815 317 aaPredicted RBP8.91□□□□□ -0.98
GARNL3-201ENST00000373386 KCNJ12Q14500 433 aa8.91□□□□□ -0.98
GARNL3-201ENST00000373386 NELFBQ8WX92 580 aa8.91□□□□□ -0.98
GARNL3-201ENST00000373386 RPGRIP1Q96KN7 1286 aa8.91□□□□□ -0.98
GARNL3-201ENST00000373386 CEP295NLQ96MC4 621 aa8.91□□□□□ -0.98
GARNL3-201ENST00000373386 HAUS4Q9H6D7 363 aa8.91□□□□□ -0.98
GARNL3-201ENST00000373386 MYO3BQ8WXR4 1341 aa8.91□□□□□ -0.98
GARNL3-201ENST00000373386 A0A1W2PQJ5 194 aa8.91□□□□□ -0.98
GARNL3-201ENST00000373386 LGALS16A8MUM7 142 aa8.91□□□□□ -0.98
GARNL3-201ENST00000373386 TTC34A8MYJ7 566 aa8.91□□□□□ -0.98
GARNL3-201ENST00000373386 PSMD14O00487 310 aa8.91□□□□□ -0.98
GARNL3-201ENST00000373386 ZPR1O75312 459 aa8.91□□□□□ -0.98
GARNL3-201ENST00000373386 SKIP12755 728 aa8.91□□□□□ -0.98
GARNL3-201ENST00000373386 IL1R1P14778 569 aa8.91□□□□□ -0.98
GARNL3-201ENST00000373386 CASP1P29466 404 aa8.91□□□□□ -0.98
GARNL3-201ENST00000373386 PRDX5P30044 214 aa8.91□□□□□ -0.98
GARNL3-201ENST00000373386 KRT9P35527 623 aa8.91□□□□□ -0.98
GARNL3-201ENST00000373386 STAT6P42226 847 aa8.91□□□□□ -0.98
GARNL3-201ENST00000373386 FNTAP49354 379 aa8.91□□□□□ -0.98
GARNL3-201ENST00000373386 TFAP4Q01664 338 aa8.91□□□□□ -0.98
GARNL3-201ENST00000373386 ACTN3Q08043 901 aaPredicted RBP8.91□□□□□ -0.98
GARNL3-201ENST00000373386 CAMK2BQ13554 666 aa8.91□□□□□ -0.98
GARNL3-201ENST00000373386 LBRQ14739 615 aaKnown RBP8.91□□□□□ -0.98
GARNL3-201ENST00000373386 PLCB4Q15147 1175 aa8.91□□□□□ -0.98
GARNL3-201ENST00000373386 MEA1Q16626 185 aa8.91□□□□□ -0.98
GARNL3-201ENST00000373386 NAALADL2Q58DX5 795 aa8.91□□□□□ -0.98
GARNL3-201ENST00000373386 TMEM53Q6P2H8 277 aa8.91□□□□□ -0.98
GARNL3-201ENST00000373386 C16orf86Q6ZW13 317 aa8.91□□□□□ -0.98
GARNL3-201ENST00000373386 EHBP1Q8NDI1 1231 aa8.91□□□□□ -0.98
GARNL3-201ENST00000373386 ZNF507Q8TCN5 953 aa8.91□□□□□ -0.98
GARNL3-201ENST00000373386 SNX27Q96L92 541 aa8.91□□□□□ -0.98
GARNL3-201ENST00000373386 C7orf25Q9BPX7 421 aa8.91□□□□□ -0.98
GARNL3-201ENST00000373386 KRT82Q9NSB4 513 aa8.91□□□□□ -0.98
GARNL3-201ENST00000373386 MCM9Q9NXL9 1143 aa8.91□□□□□ -0.98
GARNL3-201ENST00000373386 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.91□□□□□ -0.98
GARNL3-201ENST00000373386 STK39Q9UEW8 545 aa8.91□□□□□ -0.98
GARNL3-201ENST00000373386 SNED1Q8TER0 1413 aa8.9□□□□□ -0.98
GARNL3-201ENST00000373386 KLRC4O43908 158 aa8.9□□□□□ -0.98
GARNL3-201ENST00000373386 DIAPH2O60879 1101 aa8.9□□□□□ -0.98
GARNL3-201ENST00000373386 N4BP1O75113 896 aaKnown RBP8.9□□□□□ -0.98
GARNL3-201ENST00000373386 NDUFA10O95299 355 aa8.9□□□□□ -0.98
GARNL3-201ENST00000373386 VIMP08670 466 aaKnown RBP8.9□□□□□ -0.98
GARNL3-201ENST00000373386 HMGB2P26583 209 aaKnown RBP8.9□□□□□ -0.98
GARNL3-201ENST00000373386 GNA11P29992 359 aa8.9□□□□□ -0.98
GARNL3-201ENST00000373386 AARSP49588 968 aaKnown RBP eCLIP8.9□□□□□ -0.98
GARNL3-201ENST00000373386 GUCY2FP51841 1108 aa8.9□□□□□ -0.98
GARNL3-201ENST00000373386 SMTNP53814 917 aa8.9□□□□□ -0.98
GARNL3-201ENST00000373386 CKAP4Q07065 602 aaKnown RBP8.9□□□□□ -0.98
GARNL3-201ENST00000373386 CFAP157Q5JU67 520 aa8.9□□□□□ -0.98
GARNL3-201ENST00000373386 PPP1R18Q6NYC8 613 aa8.9□□□□□ -0.98
GARNL3-201ENST00000373386 TRAPPC11Q7Z392 1133 aa8.9□□□□□ -0.98
GARNL3-201ENST00000373386 LINC00469Q8N7U9 141 aa8.9□□□□□ -0.98
GARNL3-201ENST00000373386 NEDD1Q8NHV4 660 aa8.9□□□□□ -0.98
GARNL3-201ENST00000373386 CCDC110Q8TBZ0 833 aa8.9□□□□□ -0.98
GARNL3-201ENST00000373386 GIPC2Q8TF65 315 aa8.9□□□□□ -0.98
GARNL3-201ENST00000373386 SLF1Q9BQI6 1058 aa8.9□□□□□ -0.98
GARNL3-201ENST00000373386 EIF2AQ9BY44 585 aaKnown RBP8.9□□□□□ -0.98
GARNL3-201ENST00000373386 VPS16Q9H269 839 aa8.9□□□□□ -0.98
GARNL3-201ENST00000373386 SUGCTQ9HAC7 445 aa8.9□□□□□ -0.98
GARNL3-201ENST00000373386 TAB2Q9NYJ8 693 aa8.9□□□□□ -0.98
GARNL3-201ENST00000373386 CAPN11Q9UMQ6 739 aa8.9□□□□□ -0.98
GARNL3-201ENST00000373386 NOSIPQ9Y314 301 aaKnown RBP8.9□□□□□ -0.98
GARNL3-201ENST00000373386 EPN1Q9Y6I3 576 aaPredicted RBP8.9□□□□□ -0.98
GARNL3-201ENST00000373386 GREB1LQ9C091 1923 aaPredicted RBP8.9□□□□□ -0.98
GARNL3-201ENST00000373386 GPR75-ASB3A0A0A6YYF3 556 aa8.9□□□□□ -0.98
GARNL3-201ENST00000373386 A0A1B0GVG6 124 aa8.9□□□□□ -0.98
GARNL3-201ENST00000373386 MYO1FO00160 1098 aa8.9□□□□□ -0.98
GARNL3-201ENST00000373386 CLASP2O75122 1294 aaKnown RBP8.9□□□□□ -0.98
GARNL3-201ENST00000373386 CSPG5O95196 566 aa8.9□□□□□ -0.98
GARNL3-201ENST00000373386 MCM7P33993 719 aa8.9□□□□□ -0.98
GARNL3-201ENST00000373386 DNM2P50570 870 aa8.9□□□□□ -0.98
GARNL3-201ENST00000373386 USP14P54578 494 aa8.9□□□□□ -0.98
GARNL3-201ENST00000373386 ITGA7Q13683 1181 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms