RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 PCK1P35558 622 aa11.29□□□□□ -0.6
NUP188-201ENST00000372577 SNAP25P60880 206 aa11.29□□□□□ -0.6
NUP188-201ENST00000372577 YWHAGP61981 247 aaKnown RBP eCLIP11.29□□□□□ -0.6
NUP188-201ENST00000372577 PPP2R5DQ14738 602 aa11.29□□□□□ -0.6
NUP188-201ENST00000372577 ARID5BQ14865 1188 aa11.29□□□□□ -0.6
NUP188-201ENST00000372577 KYAT1Q16773 422 aa11.29□□□□□ -0.6
NUP188-201ENST00000372577 BSPRYQ5W0U4 402 aa11.29□□□□□ -0.6
NUP188-201ENST00000372577 SNRNP48Q6IEG0 339 aaKnown RBP11.29□□□□□ -0.6
NUP188-201ENST00000372577 KCNV1Q6PIU1 500 aa11.29□□□□□ -0.6
NUP188-201ENST00000372577 ADSSL1Q8N142 457 aa11.29□□□□□ -0.6
NUP188-201ENST00000372577 TTC13Q8NBP0 860 aa11.29□□□□□ -0.6
NUP188-201ENST00000372577 ACAD9Q9H845 621 aa11.29□□□□□ -0.6
NUP188-201ENST00000372577 VAMP7P51809 220 aa11.29□□□□□ -0.6
NUP188-201ENST00000372577 MAPK6Q16659 721 aa11.29□□□□□ -0.6
NUP188-201ENST00000372577 TMEM35BQ8NCS4 154 aa11.29□□□□□ -0.6
NUP188-201ENST00000372577 MTRQ99707 1265 aa11.29□□□□□ -0.6
NUP188-201ENST00000372577 CPVLQ9H3G5 476 aa11.29□□□□□ -0.6
NUP188-201ENST00000372577 PFDN4Q9NQP4 134 aa11.29□□□□□ -0.6
NUP188-201ENST00000372577 ATP8A1Q9Y2Q0 1164 aa11.29□□□□□ -0.6
NUP188-201ENST00000372577 TTLL3Q9Y4R7 772 aa11.29□□□□□ -0.6
NUP188-201ENST00000372577 UBE4BO95155 1302 aa11.29□□□□□ -0.6
NUP188-201ENST00000372577 SALL3Q9BXA9 1300 aa11.29□□□□□ -0.6
NUP188-201ENST00000372577 PRPSAP2O60256 369 aa11.29□□□□□ -0.6
NUP188-201ENST00000372577 PHKA2P46019 1235 aa11.29□□□□□ -0.6
NUP188-201ENST00000372577 HDLBPQ00341 1268 aaKnown RBP11.29□□□□□ -0.6
NUP188-201ENST00000372577 ZNF667Q5HYK9 610 aa11.29□□□□□ -0.6
NUP188-201ENST00000372577 ERICH1Q86X53 443 aa11.29□□□□□ -0.6
NUP188-201ENST00000372577 RAVER2Q9HCJ3 691 aaKnown RBP11.29□□□□□ -0.6
NUP188-201ENST00000372577 CNTNAP5Q8WYK1 1306 aa11.28□□□□□ -0.6
NUP188-201ENST00000372577 GPR75-ASB3A0A0A6YYF3 556 aa11.28□□□□□ -0.6
NUP188-201ENST00000372577 TTC26A0AVF1 554 aa11.28□□□□□ -0.6
NUP188-201ENST00000372577 CLDN3O15551 220 aa11.28□□□□□ -0.6
NUP188-201ENST00000372577 PALMO75781 387 aa11.28□□□□□ -0.6
NUP188-201ENST00000372577 TJP3O95049 919 aa11.28□□□□□ -0.6
NUP188-201ENST00000372577 CASP1P29466 404 aa11.28□□□□□ -0.6
NUP188-201ENST00000372577 CXCR5P32302 372 aa11.28□□□□□ -0.6
NUP188-201ENST00000372577 ASPHQ12797 758 aa11.28□□□□□ -0.6
NUP188-201ENST00000372577 CEP55Q53EZ4 464 aa11.28□□□□□ -0.6
NUP188-201ENST00000372577 SLC10A5Q5PT55 438 aa11.28□□□□□ -0.6
NUP188-201ENST00000372577 SESTD1Q86VW0 696 aa11.28□□□□□ -0.6
NUP188-201ENST00000372577 RNF169Q8NCN4 708 aa11.28□□□□□ -0.6
NUP188-201ENST00000372577 SLC10A4Q96EP9 437 aa11.28□□□□□ -0.6
NUP188-201ENST00000372577 RABEP2Q9H5N1 569 aa11.28□□□□□ -0.6
NUP188-201ENST00000372577 GINM1Q9NU53 330 aa11.28□□□□□ -0.6
NUP188-201ENST00000372577 WDR46O15213 610 aaKnown RBP11.28□□□□□ -0.6
NUP188-201ENST00000372577 KRT39Q6A163 491 aa11.28□□□□□ -0.6
NUP188-201ENST00000372577 FBXO38Q6PIJ6 1188 aa11.28□□□□□ -0.6
NUP188-201ENST00000372577 BANK1Q8NDB2 785 aa11.28□□□□□ -0.6
NUP188-201ENST00000372577 WRNIP1Q96S55 665 aa11.28□□□□□ -0.6
NUP188-201ENST00000372577 SLC38A10Q9HBR0 1119 aa11.28□□□□□ -0.6
NUP188-201ENST00000372577 ABCB6Q9NP58 842 aa11.28□□□□□ -0.6
NUP188-201ENST00000372577 POTEFA5A3E0 1075 aa11.28□□□□□ -0.6
NUP188-201ENST00000372577 GGPS1O95749 300 aa11.28□□□□□ -0.6
NUP188-201ENST00000372577 OATP04181 439 aa11.28□□□□□ -0.6
NUP188-201ENST00000372577 POTEIP0CG38 1075 aa11.28□□□□□ -0.6
NUP188-201ENST00000372577 ZSCAN20P17040 1043 aaPredicted RBP11.28□□□□□ -0.6
NUP188-201ENST00000372577 SLC8A1P32418 973 aa11.28□□□□□ -0.6
NUP188-201ENST00000372577 STYK1Q6J9G0 422 aa11.28□□□□□ -0.6
NUP188-201ENST00000372577 PDXDC1Q6P996 788 aa11.28□□□□□ -0.6
NUP188-201ENST00000372577 POTEGQ6S5H5 508 aa11.28□□□□□ -0.6
NUP188-201ENST00000372577 POTEEQ6S8J3 1075 aa11.28□□□□□ -0.6
NUP188-201ENST00000372577 KCTD6Q8NC69 237 aa11.28□□□□□ -0.6
NUP188-201ENST00000372577 LXNQ9BS40 222 aa11.28□□□□□ -0.6
NUP188-201ENST00000372577 ZMYND12Q9H0C1 365 aa11.28□□□□□ -0.6
NUP188-201ENST00000372577 ZNF302Q9NR11 478 aa11.28□□□□□ -0.6
NUP188-201ENST00000372577 FAN1Q9Y2M0 1017 aa11.28□□□□□ -0.6
NUP188-201ENST00000372577 STXBP3O00186 592 aa11.28□□□□□ -0.6
NUP188-201ENST00000372577 FDPSP14324 419 aaKnown RBP11.28□□□□□ -0.6
NUP188-201ENST00000372577 RASA1P20936 1047 aa11.28□□□□□ -0.6
NUP188-201ENST00000372577 GSDMBQ8TAX9 411 aa11.28□□□□□ -0.6
NUP188-201ENST00000372577 NXF1Q9UBU9 619 aaKnown RBP11.28□□□□□ -0.6
NUP188-201ENST00000372577 GOLGA8SH3BPF8 625 aa11.27□□□□□ -0.6
NUP188-201ENST00000372577 ZNF189O75820 626 aaPredicted RBP11.27□□□□□ -0.6
NUP188-201ENST00000372577 PNMA6AP0CW24 399 aaPredicted RBP11.27□□□□□ -0.6
NUP188-201ENST00000372577 PHLDB3Q6NSJ2 640 aa11.27□□□□□ -0.6
NUP188-201ENST00000372577 ZBTB33Q86T24 672 aa11.27□□□□□ -0.6
NUP188-201ENST00000372577 TUBB6Q9BUF5 446 aa11.27□□□□□ -0.6
NUP188-201ENST00000372577 NBPF3Q9H094 633 aa11.27□□□□□ -0.6
NUP188-201ENST00000372577 INTS2Q9H0H0 1204 aaKnown RBP11.27□□□□□ -0.6
NUP188-201ENST00000372577 ZHX2Q9Y6X8 837 aa11.27□□□□□ -0.6
NUP188-201ENST00000372577 GNAT1P11488 350 aa11.27□□□□□ -0.61
NUP188-201ENST00000372577 MSH2P43246 934 aa11.27□□□□□ -0.61
NUP188-201ENST00000372577 SNRPFP62306 86 aaKnown RBP11.27□□□□□ -0.61
NUP188-201ENST00000372577 NNTQ13423 1086 aa11.27□□□□□ -0.61
NUP188-201ENST00000372577 ITPK1Q13572 414 aa11.27□□□□□ -0.61
NUP188-201ENST00000372577 FBXL16Q8N461 479 aa11.27□□□□□ -0.61
NUP188-201ENST00000372577 LRRC4Q9HBW1 653 aa11.27□□□□□ -0.61
NUP188-201ENST00000372577 SLC12A6Q9UHW9 1150 aa11.27□□□□□ -0.61
NUP188-201ENST00000372577 ZNRF3Q9ULT6 936 aa11.27□□□□□ -0.61
NUP188-201ENST00000372577 MAD1L1Q9Y6D9 718 aa11.27□□□□□ -0.61
NUP188-201ENST00000372577 USH1CQ9Y6N9 552 aa11.27□□□□□ -0.61
NUP188-201ENST00000372577 CAPN7Q9Y6W3 813 aa11.27□□□□□ -0.61
NUP188-201ENST00000372577 MEGF6O75095 1541 aa11.27□□□□□ -0.61
NUP188-201ENST00000372577 GOLGA8IPA6NC78 632 aa11.27□□□□□ -0.61
NUP188-201ENST00000372577 CCDC160A6NGH7 325 aa11.27□□□□□ -0.61
NUP188-201ENST00000372577 GOLGA8JA6NMD2 632 aa11.27□□□□□ -0.61
NUP188-201ENST00000372577 SFI1A8K8P3 1242 aa11.27□□□□□ -0.61
NUP188-201ENST00000372577 CPP00450 1065 aa11.27□□□□□ -0.61
NUP188-201ENST00000372577 SCP2P22307 547 aa11.27□□□□□ -0.61
NUP188-201ENST00000372577 SPOUT1Q5T280 376 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms