RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 STAT3P40763 770 aa5.9□□□□□ -1.47
ATG4A-204ENST00000372246 KCNJ1P48048 391 aa5.9□□□□□ -1.47
ATG4A-204ENST00000372246 COPS2P61201 443 aa5.9□□□□□ -1.47
ATG4A-204ENST00000372246 MTA1Q13330 715 aa5.9□□□□□ -1.47
ATG4A-204ENST00000372246 SLC29A2Q14542 456 aa5.9□□□□□ -1.47
ATG4A-204ENST00000372246 SLC9C1Q4G0N8 1177 aa5.9□□□□□ -1.47
ATG4A-204ENST00000372246 EAPPQ56P03 285 aaPredicted RBP5.9□□□□□ -1.47
ATG4A-204ENST00000372246 DCAF17Q5H9S7 520 aaPredicted RBP5.9□□□□□ -1.47
ATG4A-204ENST00000372246 ANKRD23Q86SG2 305 aa5.9□□□□□ -1.47
ATG4A-204ENST00000372246 CCDC63Q8NA47 563 aa5.9□□□□□ -1.47
ATG4A-204ENST00000372246 ZNF483Q8TF39 744 aaPredicted RBP5.9□□□□□ -1.47
ATG4A-204ENST00000372246 ATP8B4Q8TF62 1192 aa5.9□□□□□ -1.47
ATG4A-204ENST00000372246 TAF4BQ92750 862 aa5.9□□□□□ -1.47
ATG4A-204ENST00000372246 C18orf8Q96DM3 657 aa5.9□□□□□ -1.47
ATG4A-204ENST00000372246 CHMP6Q96FZ7 201 aa5.9□□□□□ -1.47
ATG4A-204ENST00000372246 ZNF512BQ96KM6 892 aaPredicted RBP5.9□□□□□ -1.47
ATG4A-204ENST00000372246 TMEM237Q96Q45 408 aa5.9□□□□□ -1.47
ATG4A-204ENST00000372246 PIGSQ96S52 555 aa5.9□□□□□ -1.47
ATG4A-204ENST00000372246 FAM118BQ9BPY3 351 aa5.9□□□□□ -1.47
ATG4A-204ENST00000372246 PLA2G12BQ9BX93 195 aa5.9□□□□□ -1.47
ATG4A-204ENST00000372246 FGFR1OP2Q9NVK5 253 aa5.9□□□□□ -1.47
ATG4A-204ENST00000372246 TAS2R14Q9NYV8 317 aa5.9□□□□□ -1.47
ATG4A-204ENST00000372246 PPP1R9AQ9ULJ8 1098 aa5.9□□□□□ -1.47
ATG4A-204ENST00000372246 NIP7Q9Y221 180 aaKnown RBP eCLIP5.9□□□□□ -1.47
ATG4A-204ENST00000372246 ATP6V0A2Q9Y487 856 aa5.9□□□□□ -1.47
ATG4A-204ENST00000372246 CICQ96RK0 1608 aaPredicted RBP5.9□□□□□ -1.47
ATG4A-204ENST00000372246 SPEF2Q9C093 1822 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 SMCO2A6NFE2 343 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 H0Y3Z8 333 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 CLIC2O15247 247 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 PJA2O43164 708 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 PIAS1O75925 651 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 RGS20O76081 388 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 IGHMBP2P38935 993 aaKnown RBP5.89□□□□□ -1.47
ATG4A-204ENST00000372246 CASP4P49662 377 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 MRPL12P52815 198 aaKnown RBP5.89□□□□□ -1.47
ATG4A-204ENST00000372246 ITIH3Q06033 890 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 XRCC4Q13426 336 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 SETDB1Q15047 1291 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 SLC18A3Q16572 532 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 LONRF1Q17RB8 773 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 TCERG1LQ5VWI1 586 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 ARL6IP4Q66PJ3 421 aaKnown RBP5.89□□□□□ -1.47
ATG4A-204ENST00000372246 CD302Q8IX05 232 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 ZDHHC14Q8IZN3 488 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 MREGQ8N565 214 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 FBXO25Q8TCJ0 367 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 SNX29Q8TEQ0 813 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 WHAMMQ8TF30 809 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 U2AF1L4Q8WU68 220 aaKnown RBP5.89□□□□□ -1.47
ATG4A-204ENST00000372246 SCFD2Q8WU76 684 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 ACSBG1Q96GR2 724 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 ZNF317Q96PQ6 595 aaPredicted RBP5.89□□□□□ -1.47
ATG4A-204ENST00000372246 PAGR1Q9BTK6 254 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 DDX23Q9BUQ8 820 aaKnown RBP5.89□□□□□ -1.47
ATG4A-204ENST00000372246 ACP6Q9NPH0 428 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 SEPT11Q9NVA2 429 aaKnown RBP5.89□□□□□ -1.47
ATG4A-204ENST00000372246 TBK1Q9UHD2 729 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 TMEM59LQ9UK28 342 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.89□□□□□ -1.47
ATG4A-204ENST00000372246 TAF1P21675 1872 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 PCDH11XQ9BZA7 1347 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 PCDH11YQ9BZA8 1340 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 ADAMTS7Q9UKP4 1686 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 LMTK3Q96Q04 1460 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 SPDYE5A6NIY4 337 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 KLRF2D3W0D1 207 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 RAD21O60216 631 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 GFPT2O94808 682 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 CALCAP01258 141 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 SERPING1P05155 500 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 RARAP10276 462 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 CYP19A1P11511 503 aaPredicted RBP5.89□□□□□ -1.47
ATG4A-204ENST00000372246 KRT13P13646 458 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 GNAT2P19087 354 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 TNFRSF8P28908 595 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 TNNC1P63316 161 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 CDK17Q00537 523 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 TRIM28Q13263 835 aaKnown RBP5.89□□□□□ -1.47
ATG4A-204ENST00000372246 ASIC2Q16515 512 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 GNPTABQ3T906 1256 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 TBC1D10BQ4KMP7 808 aaPredicted RBP5.89□□□□□ -1.47
ATG4A-204ENST00000372246 ERMARDQ5T6L9 678 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 BLOC1S3Q6QNY0 202 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 SV2BQ7L1I2 683 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 MIGA2Q7L4E1 593 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 MAPKAPK5Q8IW41 473 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 CCDC197Q8NCU1 140 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 ATXN2LQ8WWM7 1075 aaKnown RBP5.89□□□□□ -1.47
ATG4A-204ENST00000372246 LARP4BQ92615 738 aaKnown RBP5.89□□□□□ -1.47
ATG4A-204ENST00000372246 CELF1Q92879 486 aaKnown RBP5.89□□□□□ -1.47
ATG4A-204ENST00000372246 ITFG2Q969R8 447 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 ARHGEF26Q96DR7 871 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 RMDN2Q96LZ7 410 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 C7orf25Q9BPX7 421 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 PRR14Q9BWN1 585 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 CCSER1Q9C0I3 900 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 ECT2Q9H8V3 914 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 SUGT1Q9Y2Z0 365 aa5.89□□□□□ -1.47
ATG4A-204ENST00000372246 PCDHB3Q9Y5E6 796 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms