RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 TBC1D7Q9P0N9 293 aa9.64□□□□□ -0.87
ATG4A-203ENST00000372232 SWAP70Q9UH65 585 aa9.64□□□□□ -0.87
ATG4A-203ENST00000372232 AKR1B15C9JRZ8 316 aaPredicted RBP9.63□□□□□ -0.87
ATG4A-203ENST00000372232 TRAPPC3O43617 180 aa9.63□□□□□ -0.87
ATG4A-203ENST00000372232 CEP104O60308 925 aa9.63□□□□□ -0.87
ATG4A-203ENST00000372232 PPP6R2O75170 966 aa9.63□□□□□ -0.87
ATG4A-203ENST00000372232 STK10O94804 968 aaKnown RBP9.63□□□□□ -0.87
ATG4A-203ENST00000372232 UPP2O95045 317 aa9.63□□□□□ -0.87
ATG4A-203ENST00000372232 MARCKSP29966 332 aaPredicted RBP9.63□□□□□ -0.87
ATG4A-203ENST00000372232 GUCY1A2P33402 732 aa9.63□□□□□ -0.87
ATG4A-203ENST00000372232 EPHB4P54760 987 aa9.63□□□□□ -0.87
ATG4A-203ENST00000372232 MCCD1P59942 119 aaPredicted RBP9.63□□□□□ -0.87
ATG4A-203ENST00000372232 SEPT2Q15019 361 aa9.63□□□□□ -0.87
ATG4A-203ENST00000372232 TAF11Q15544 211 aa9.63□□□□□ -0.87
ATG4A-203ENST00000372232 PTPN21Q16825 1174 aa9.63□□□□□ -0.87
ATG4A-203ENST00000372232 EMBQ6PCB8 327 aa9.63□□□□□ -0.87
ATG4A-203ENST00000372232 LMNTD2Q8IXW0 634 aa9.63□□□□□ -0.87
ATG4A-203ENST00000372232 ESR2Q92731 530 aa9.63□□□□□ -0.87
ATG4A-203ENST00000372232 ZIM3Q96PE6 472 aa9.63□□□□□ -0.87
ATG4A-203ENST00000372232 MAP3K14Q99558 947 aa9.63□□□□□ -0.87
ATG4A-203ENST00000372232 UBAC1Q9BSL1 405 aa9.63□□□□□ -0.87
ATG4A-203ENST00000372232 PCDH18Q9HCL0 1135 aa9.63□□□□□ -0.87
ATG4A-203ENST00000372232 CIDEBQ9UHD4 219 aa9.63□□□□□ -0.87
ATG4A-203ENST00000372232 CCNL1Q9UK58 526 aaPredicted RBP9.63□□□□□ -0.87
ATG4A-203ENST00000372232 BARX2Q9UMQ3 279 aaPredicted RBP9.63□□□□□ -0.87
ATG4A-203ENST00000372232 COL4A3BPQ9Y5P4 624 aa9.63□□□□□ -0.87
ATG4A-203ENST00000372232 SMIM22K7EJ46 135 aa9.62□□□□□ -0.87
ATG4A-203ENST00000372232 TMCC1O94876 653 aa9.62□□□□□ -0.87
ATG4A-203ENST00000372232 CLTAP09496 248 aa9.62□□□□□ -0.87
ATG4A-203ENST00000372232 CCNYL3P0C7X3 344 aa9.62□□□□□ -0.87
ATG4A-203ENST00000372232 HARSP12081 509 aaKnown RBP9.62□□□□□ -0.87
ATG4A-203ENST00000372232 PFKFB1P16118 471 aa9.62□□□□□ -0.87
ATG4A-203ENST00000372232 STAT6P42226 847 aa9.62□□□□□ -0.87
ATG4A-203ENST00000372232 POLE2P56282 527 aa9.62□□□□□ -0.87
ATG4A-203ENST00000372232 DYNLL1P63167 89 aaKnown RBP9.62□□□□□ -0.87
ATG4A-203ENST00000372232 CBX3Q13185 183 aa9.62□□□□□ -0.87
ATG4A-203ENST00000372232 SEC23AQ15436 765 aa9.62□□□□□ -0.87
ATG4A-203ENST00000372232 DOK7Q18PE1 504 aa9.62□□□□□ -0.87
ATG4A-203ENST00000372232 TMEM110Q86TL2 294 aa9.62□□□□□ -0.87
ATG4A-203ENST00000372232 AMIGO3Q86WK7 504 aa9.62□□□□□ -0.87
ATG4A-203ENST00000372232 IQCF2Q8IXL9 164 aa9.62□□□□□ -0.87
ATG4A-203ENST00000372232 SEPT12Q8IYM1 358 aa9.62□□□□□ -0.87
ATG4A-203ENST00000372232 TRIM22Q8IYM9 498 aa9.62□□□□□ -0.87
ATG4A-203ENST00000372232 ZNF654Q8IZM8 581 aa9.62□□□□□ -0.87
ATG4A-203ENST00000372232 CRACR2BQ8N4Y2 399 aaPredicted RBP9.62□□□□□ -0.87
ATG4A-203ENST00000372232 FANCBQ8NB91 859 aa9.62□□□□□ -0.87
ATG4A-203ENST00000372232 PPP1R14BQ96C90 147 aa9.62□□□□□ -0.87
ATG4A-203ENST00000372232 DMRTB1Q96MA1 342 aa9.62□□□□□ -0.87
ATG4A-203ENST00000372232 SYT15Q9BQS2 421 aa9.62□□□□□ -0.87
ATG4A-203ENST00000372232 BRIP1Q9BX63 1249 aa9.62□□□□□ -0.87
ATG4A-203ENST00000372232 ANKRD2Q9GZV1 360 aa9.62□□□□□ -0.87
ATG4A-203ENST00000372232 METTL14Q9HCE5 456 aaKnown RBP9.62□□□□□ -0.87
ATG4A-203ENST00000372232 SRA1Q9HD15 236 aaKnown RBP9.62□□□□□ -0.87
ATG4A-203ENST00000372232 TUBE1Q9UJT0 475 aa9.62□□□□□ -0.87
ATG4A-203ENST00000372232 RTCBQ9Y3I0 505 aaKnown RBP9.62□□□□□ -0.87
ATG4A-203ENST00000372232 SCN7AQ01118 1682 aa9.62□□□□□ -0.87
ATG4A-203ENST00000372232 PDS5AQ29RF7 1337 aaKnown RBP9.62□□□□□ -0.87
ATG4A-203ENST00000372232 ZBTB39O15060 712 aa9.62□□□□□ -0.87
ATG4A-203ENST00000372232 FAM200BP0CF97 657 aa9.62□□□□□ -0.87
ATG4A-203ENST00000372232 ZFXP17010 805 aaPredicted RBP9.62□□□□□ -0.87
ATG4A-203ENST00000372232 SP100P23497 879 aaPredicted RBP9.62□□□□□ -0.87
ATG4A-203ENST00000372232 TM4SF1P30408 202 aa9.62□□□□□ -0.87
ATG4A-203ENST00000372232 HIBADHP31937 336 aaKnown RBP9.62□□□□□ -0.87
ATG4A-203ENST00000372232 SLC7A5Q01650 507 aa9.62□□□□□ -0.87
ATG4A-203ENST00000372232 KIF5AQ12840 1032 aa9.62□□□□□ -0.87
ATG4A-203ENST00000372232 ITGB3BPQ13352 177 aaPredicted RBP9.62□□□□□ -0.87
ATG4A-203ENST00000372232 KCTD16Q68DU8 428 aa9.62□□□□□ -0.87
ATG4A-203ENST00000372232 CCDC24Q8N4L8 307 aa9.62□□□□□ -0.87
ATG4A-203ENST00000372232 ARFGAP2Q8N6H7 521 aa9.62□□□□□ -0.87
ATG4A-203ENST00000372232 SAMD3Q8N6K7 520 aa9.62□□□□□ -0.87
ATG4A-203ENST00000372232 MLKLQ8NB16 471 aa9.62□□□□□ -0.87
ATG4A-203ENST00000372232 ATP11CQ8NB49 1132 aa9.62□□□□□ -0.87
ATG4A-203ENST00000372232 NSUN4Q96CB9 384 aaKnown RBP9.62□□□□□ -0.87
ATG4A-203ENST00000372232 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.62□□□□□ -0.87
ATG4A-203ENST00000372232 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.62□□□□□ -0.87
ATG4A-203ENST00000372232 ZNF358Q9NW07 568 aa9.62□□□□□ -0.87
ATG4A-203ENST00000372232 LRRC42Q9Y546 428 aa9.62□□□□□ -0.87
ATG4A-203ENST00000372232 PCDHB11Q9Y5F2 797 aa9.62□□□□□ -0.87
ATG4A-203ENST00000372232 MROH7-TTC4A0A0A0MT08 1334 aa9.61□□□□□ -0.87
ATG4A-203ENST00000372232 TNKSO95271 1327 aa9.61□□□□□ -0.87
ATG4A-203ENST00000372232 HMGB1P1B2RPK0 211 aaPredicted RBP9.61□□□□□ -0.87
ATG4A-203ENST00000372232 PSMD14O00487 310 aa9.61□□□□□ -0.87
ATG4A-203ENST00000372232 DEXIO95424 95 aa9.61□□□□□ -0.87
ATG4A-203ENST00000372232 MMP1P03956 469 aa9.61□□□□□ -0.87
ATG4A-203ENST00000372232 IDO1P14902 403 aa9.61□□□□□ -0.87
ATG4A-203ENST00000372232 ATP2A2P16615 1042 aaKnown RBP9.61□□□□□ -0.87
ATG4A-203ENST00000372232 BPIFB4P59827 614 aa9.61□□□□□ -0.87
ATG4A-203ENST00000372232 MECOMQ03112 1051 aa9.61□□□□□ -0.87
ATG4A-203ENST00000372232 ADCY1Q08828 1119 aa9.61□□□□□ -0.87
ATG4A-203ENST00000372232 FAM182BQ5T319 152 aa9.61□□□□□ -0.87
ATG4A-203ENST00000372232 PAPD7Q5XG87 772 aaKnown RBP9.61□□□□□ -0.87
ATG4A-203ENST00000372232 SHC4Q6S5L8 630 aa9.61□□□□□ -0.87
ATG4A-203ENST00000372232 PNMA8AQ86V59 439 aaPredicted RBP9.61□□□□□ -0.87
ATG4A-203ENST00000372232 NOSTRINQ8IVI9 506 aa9.61□□□□□ -0.87
ATG4A-203ENST00000372232 COL26A1Q96A83 441 aa9.61□□□□□ -0.87
ATG4A-203ENST00000372232 FGD4Q96M96 766 aa9.61□□□□□ -0.87
ATG4A-203ENST00000372232 POLR3CQ9BUI4 534 aaPredicted RBP9.61□□□□□ -0.87
ATG4A-203ENST00000372232 EVA1BQ9NVM1 165 aa9.61□□□□□ -0.87
ATG4A-203ENST00000372232 TFCP2L1Q9NZI6 479 aa9.61□□□□□ -0.87
ATG4A-203ENST00000372232 PAIP2BQ9ULR5 123 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms