RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 HMGB2P26583 209 aaKnown RBP12.85□□□□□ -0.35
PDE6C-201ENST00000371447 USP14P54578 494 aa12.85□□□□□ -0.35
PDE6C-201ENST00000371447 FKBP1AP62942 108 aaKnown RBP12.85□□□□□ -0.35
PDE6C-201ENST00000371447 CBWD6Q4V339 395 aa12.85□□□□□ -0.35
PDE6C-201ENST00000371447 XKR9Q5GH70 373 aa12.85□□□□□ -0.35
PDE6C-201ENST00000371447 CBWD3Q5JTY5 395 aa12.85□□□□□ -0.35
PDE6C-201ENST00000371447 CBWD5Q5RIA9 395 aa12.85□□□□□ -0.35
PDE6C-201ENST00000371447 ARHGEF16Q5VV41 709 aa12.85□□□□□ -0.35
PDE6C-201ENST00000371447 TAF3Q5VWG9 929 aa12.85□□□□□ -0.35
PDE6C-201ENST00000371447 PAPD7Q5XG87 772 aaKnown RBP12.85□□□□□ -0.35
PDE6C-201ENST00000371447 C1orf186Q6ZWK4 172 aa12.85□□□□□ -0.35
PDE6C-201ENST00000371447 PRPF38AQ8NAV1 312 aaKnown RBP12.85□□□□□ -0.35
PDE6C-201ENST00000371447 SLC35C1Q96A29 364 aa12.85□□□□□ -0.35
PDE6C-201ENST00000371447 MBOAT7Q96N66 472 aa12.85□□□□□ -0.35
PDE6C-201ENST00000371447 WRNIP1Q96S55 665 aa12.85□□□□□ -0.35
PDE6C-201ENST00000371447 AP1M1Q9BXS5 423 aa12.85□□□□□ -0.35
PDE6C-201ENST00000371447 RBM12Q9NTZ6 932 aaKnown RBP12.85□□□□□ -0.35
PDE6C-201ENST00000371447 HACL1Q9UJ83 578 aa12.85□□□□□ -0.35
PDE6C-201ENST00000371447 ZHX2Q9Y6X8 837 aa12.85□□□□□ -0.35
PDE6C-201ENST00000371447 PPP1R12BO60237 982 aaPredicted RBP12.84□□□□□ -0.35
PDE6C-201ENST00000371447 CIITAP33076 1130 aa12.84□□□□□ -0.35
PDE6C-201ENST00000371447 GUCY2FP51841 1108 aa12.84□□□□□ -0.35
PDE6C-201ENST00000371447 CKAP4Q07065 602 aaKnown RBP12.84□□□□□ -0.35
PDE6C-201ENST00000371447 KLHDC7AQ5VTJ3 777 aa12.84□□□□□ -0.35
PDE6C-201ENST00000371447 ALKBH5Q6P6C2 394 aaKnown RBP12.84□□□□□ -0.35
PDE6C-201ENST00000371447 CREG2Q8IUH2 290 aa12.84□□□□□ -0.35
PDE6C-201ENST00000371447 SPATA4Q8NEY3 305 aa12.84□□□□□ -0.35
PDE6C-201ENST00000371447 SAAL1Q96ER3 474 aa12.84□□□□□ -0.35
PDE6C-201ENST00000371447 CBWD1Q9BRT8 395 aa12.84□□□□□ -0.35
PDE6C-201ENST00000371447 GBP3Q9H0R5 595 aa12.84□□□□□ -0.35
PDE6C-201ENST00000371447 RANBP17Q9H2T7 1088 aaKnown RBP12.84□□□□□ -0.35
PDE6C-201ENST00000371447 CNOT7Q9UIV1 285 aaKnown RBP12.84□□□□□ -0.35
PDE6C-201ENST00000371447 FEM1BQ9UK73 627 aa12.84□□□□□ -0.35
PDE6C-201ENST00000371447 PITPNM2Q9BZ72 1349 aa12.84□□□□□ -0.35
PDE6C-201ENST00000371447 ATRNL1Q5VV63 1379 aa12.84□□□□□ -0.35
PDE6C-201ENST00000371447 CEP104O60308 925 aa12.84□□□□□ -0.35
PDE6C-201ENST00000371447 ITGB3BPQ13352 177 aaPredicted RBP12.84□□□□□ -0.35
PDE6C-201ENST00000371447 BAATQ14032 418 aaPredicted RBP12.84□□□□□ -0.35
PDE6C-201ENST00000371447 UGCGQ16739 394 aa12.84□□□□□ -0.35
PDE6C-201ENST00000371447 PHLDB2Q86SQ0 1253 aa12.84□□□□□ -0.35
PDE6C-201ENST00000371447 TEX2Q8IWB9 1127 aa12.84□□□□□ -0.35
PDE6C-201ENST00000371447 MXRA8Q9BRK3 442 aa12.84□□□□□ -0.35
PDE6C-201ENST00000371447 TLR10Q9BXR5 811 aa12.84□□□□□ -0.35
PDE6C-201ENST00000371447 EHMT1Q9H9B1 1298 aa12.84□□□□□ -0.35
PDE6C-201ENST00000371447 L1RE1Q9UN81 338 aa12.84□□□□□ -0.35
PDE6C-201ENST00000371447 PDXKO00764 312 aa12.83□□□□□ -0.35
PDE6C-201ENST00000371447 CALCAP01258 141 aa12.83□□□□□ -0.35
PDE6C-201ENST00000371447 MKRN4PQ13434 485 aaPredicted RBP12.83□□□□□ -0.35
PDE6C-201ENST00000371447 TNIP1Q15025 636 aa12.83□□□□□ -0.35
PDE6C-201ENST00000371447 TRADDQ15628 312 aa12.83□□□□□ -0.35
PDE6C-201ENST00000371447 TTC19Q6DKK2 380 aaPredicted RBP12.83□□□□□ -0.35
PDE6C-201ENST00000371447 IQCEQ6IPM2 695 aa12.83□□□□□ -0.35
PDE6C-201ENST00000371447 CCDC70Q6NSX1 233 aa12.83□□□□□ -0.35
PDE6C-201ENST00000371447 EEPD1Q7L9B9 569 aa12.83□□□□□ -0.35
PDE6C-201ENST00000371447 KRT12Q99456 494 aa12.83□□□□□ -0.35
PDE6C-201ENST00000371447 POP1Q99575 1024 aaKnown RBP12.83□□□□□ -0.35
PDE6C-201ENST00000371447 POLR3CQ9BUI4 534 aaPredicted RBP12.83□□□□□ -0.35
PDE6C-201ENST00000371447 VCAM1P19320 739 aa12.83□□□□□ -0.36
PDE6C-201ENST00000371447 PSMC2P35998 433 aaKnown RBP12.83□□□□□ -0.36
PDE6C-201ENST00000371447 SEMA3FQ13275 785 aa12.83□□□□□ -0.36
PDE6C-201ENST00000371447 SLC18A3Q16572 532 aa12.83□□□□□ -0.36
PDE6C-201ENST00000371447 EDRF1Q3B7T1 1238 aa12.83□□□□□ -0.36
PDE6C-201ENST00000371447 COBLL1Q53SF7 1204 aa12.83□□□□□ -0.36
PDE6C-201ENST00000371447 MOXD1Q6UVY6 613 aa12.83□□□□□ -0.36
PDE6C-201ENST00000371447 GANQ9H2C0 597 aa12.83□□□□□ -0.36
PDE6C-201ENST00000371447 CENPHQ9H3R5 247 aa12.83□□□□□ -0.36
PDE6C-201ENST00000371447 FAM184BQ9ULE4 1060 aa12.83□□□□□ -0.36
PDE6C-201ENST00000371447 MRPS9P82933 396 aaKnown RBP12.83□□□□□ -0.36
PDE6C-201ENST00000371447 GABPB1Q06547 395 aaPredicted RBP12.83□□□□□ -0.36
PDE6C-201ENST00000371447 GPS2Q13227 327 aa12.83□□□□□ -0.36
PDE6C-201ENST00000371447 ZNF720Q7Z2F6 126 aa12.83□□□□□ -0.36
PDE6C-201ENST00000371447 AGPAT3Q9NRZ7 376 aa12.83□□□□□ -0.36
PDE6C-201ENST00000371447 DNAJC12Q9UKB3 198 aa12.83□□□□□ -0.36
PDE6C-201ENST00000371447 POTEB2H3BUK9 544 aa12.82□□□□□ -0.36
PDE6C-201ENST00000371447 DRAP1Q14919 205 aaPredicted RBP12.82□□□□□ -0.36
PDE6C-201ENST00000371447 TKFCQ3LXA3 575 aa12.82□□□□□ -0.36
PDE6C-201ENST00000371447 ANGEL2Q5VTE6 544 aaKnown RBP12.82□□□□□ -0.36
PDE6C-201ENST00000371447 C8orf74Q6P047 294 aa12.82□□□□□ -0.36
PDE6C-201ENST00000371447 RNF207Q6ZRF8 634 aa12.82□□□□□ -0.36
PDE6C-201ENST00000371447 FAM160B2Q86V87 743 aa12.82□□□□□ -0.36
PDE6C-201ENST00000371447 MSANTD4Q8NCY6 345 aa12.82□□□□□ -0.36
PDE6C-201ENST00000371447 TAF4BQ92750 862 aa12.82□□□□□ -0.36
PDE6C-201ENST00000371447 SLC5A5Q92911 643 aa12.82□□□□□ -0.36
PDE6C-201ENST00000371447 TRIM31Q9BZY9 425 aa12.82□□□□□ -0.36
PDE6C-201ENST00000371447 ZNF536O15090 1300 aa12.82□□□□□ -0.36
PDE6C-201ENST00000371447 ICAM1P05362 532 aa12.82□□□□□ -0.36
PDE6C-201ENST00000371447 GUCY2DQ02846 1103 aa12.82□□□□□ -0.36
PDE6C-201ENST00000371447 R3HDM1Q15032 1099 aaKnown RBP12.82□□□□□ -0.36
PDE6C-201ENST00000371447 LMBRD2Q68DH5 695 aaPredicted RBP12.82□□□□□ -0.36
PDE6C-201ENST00000371447 SYTL5Q8TDW5 730 aaPredicted RBP12.82□□□□□ -0.36
PDE6C-201ENST00000371447 KAT5Q92993 513 aa12.82□□□□□ -0.36
PDE6C-201ENST00000371447 OSGEPQ9NPF4 335 aa12.82□□□□□ -0.36
PDE6C-201ENST00000371447 LUC7LQ9NQ29 371 aaKnown RBP12.82□□□□□ -0.36
PDE6C-201ENST00000371447 ADAM21Q9UKJ8 722 aa12.82□□□□□ -0.36
PDE6C-201ENST00000371447 TRAF3IP3Q9Y228 551 aa12.82□□□□□ -0.36
PDE6C-201ENST00000371447 COL4A5P29400 1685 aa12.82□□□□□ -0.36
PDE6C-201ENST00000371447 FRMD3A2A2Y4 597 aa12.82□□□□□ -0.36
PDE6C-201ENST00000371447 PIK3CDO00329 1044 aa12.82□□□□□ -0.36
PDE6C-201ENST00000371447 BACH1O14867 736 aa12.82□□□□□ -0.36
PDE6C-201ENST00000371447 DLATP10515 647 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms