RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 ZNF365Q70YC5 407 aa7.76□□□□□ -1.17
USP1-202ENST00000371146 Q7L0L9 218 aa7.76□□□□□ -1.17
USP1-202ENST00000371146 FAM84AQ96KN4 292 aa7.76□□□□□ -1.17
USP1-202ENST00000371146 DRC1Q96MC2 740 aa7.76□□□□□ -1.17
USP1-202ENST00000371146 ZMYND12Q9H0C1 365 aa7.76□□□□□ -1.17
USP1-202ENST00000371146 WDR70Q9NW82 654 aa7.76□□□□□ -1.17
USP1-202ENST00000371146 MTMR6Q9Y217 621 aa7.76□□□□□ -1.17
USP1-202ENST00000371146 FER1L6Q2WGJ9 1857 aa7.76□□□□□ -1.17
USP1-202ENST00000371146 K7ERI5 159 aa7.76□□□□□ -1.17
USP1-202ENST00000371146 SMIM10L2AP0DMW4 78 aa7.76□□□□□ -1.17
USP1-202ENST00000371146 SMIM10L2BP0DMW5 78 aa7.76□□□□□ -1.17
USP1-202ENST00000371146 YWHABP31946 246 aaKnown RBP7.76□□□□□ -1.17
USP1-202ENST00000371146 LRMPQ12912 555 aa7.76□□□□□ -1.17
USP1-202ENST00000371146 ZNF792Q3KQV3 632 aa7.76□□□□□ -1.17
USP1-202ENST00000371146 PADI6Q6TGC4 694 aa7.76□□□□□ -1.17
USP1-202ENST00000371146 SV2BQ7L1I2 683 aa7.76□□□□□ -1.17
USP1-202ENST00000371146 FAM178BQ8IXR5 827 aa7.76□□□□□ -1.17
USP1-202ENST00000371146 DNERQ8NFT8 737 aa7.76□□□□□ -1.17
USP1-202ENST00000371146 ZSWIM4Q9H7M6 989 aa7.76□□□□□ -1.17
USP1-202ENST00000371146 JADE2Q9NQC1 790 aa7.76□□□□□ -1.17
USP1-202ENST00000371146 TBC1D22BQ9NU19 505 aa7.76□□□□□ -1.17
USP1-202ENST00000371146 SEPT11Q9NVA2 429 aaKnown RBP7.76□□□□□ -1.17
USP1-202ENST00000371146 HTTP42858 3142 aa7.76□□□□□ -1.17
USP1-202ENST00000371146 TLL1O43897 1013 aa7.75□□□□□ -1.17
USP1-202ENST00000371146 AKAP5P24588 427 aa7.75□□□□□ -1.17
USP1-202ENST00000371146 TNNT3P45378 269 aaPredicted RBP7.75□□□□□ -1.17
USP1-202ENST00000371146 SMTNP53814 917 aa7.75□□□□□ -1.17
USP1-202ENST00000371146 OAZ1P54368 228 aa7.75□□□□□ -1.17
USP1-202ENST00000371146 ITGB3BPQ13352 177 aaPredicted RBP7.75□□□□□ -1.17
USP1-202ENST00000371146 CELF3Q5SZQ8 465 aaKnown RBP7.75□□□□□ -1.17
USP1-202ENST00000371146 PSPC1Q8WXF1 523 aaKnown RBP7.75□□□□□ -1.17
USP1-202ENST00000371146 PPP1R9BQ96SB3 815 aa7.75□□□□□ -1.17
USP1-202ENST00000371146 GRPEL1Q9HAV7 217 aa7.75□□□□□ -1.17
USP1-202ENST00000371146 DACT1Q9NYF0 836 aa7.75□□□□□ -1.17
USP1-202ENST00000371146 CACNG4Q9UBN1 327 aa7.75□□□□□ -1.17
USP1-202ENST00000371146 SERTAD1Q9UHV2 236 aa7.75□□□□□ -1.17
USP1-202ENST00000371146 SBF1O95248 1867 aa7.75□□□□□ -1.17
USP1-202ENST00000371146 NEFHP12036 1026 aa7.75□□□□□ -1.17
USP1-202ENST00000371146 PLCG1P19174 1290 aa7.75□□□□□ -1.17
USP1-202ENST00000371146 DDIT3P35638 169 aa7.75□□□□□ -1.17
USP1-202ENST00000371146 NUMBP49757 651 aa7.75□□□□□ -1.17
USP1-202ENST00000371146 LIG4P49917 911 aa7.75□□□□□ -1.17
USP1-202ENST00000371146 MAP3K10Q02779 954 aa7.75□□□□□ -1.17
USP1-202ENST00000371146 DRP2Q13474 957 aa7.75□□□□□ -1.17
USP1-202ENST00000371146 BTG3Q14201 252 aaPredicted RBP7.75□□□□□ -1.17
USP1-202ENST00000371146 UGCGQ16739 394 aa7.75□□□□□ -1.17
USP1-202ENST00000371146 DCAF17Q5H9S7 520 aaPredicted RBP7.75□□□□□ -1.17
USP1-202ENST00000371146 ZNF697Q5TEC3 545 aa7.75□□□□□ -1.17
USP1-202ENST00000371146 ZBTB8OSQ8IWT0 167 aa7.75□□□□□ -1.17
USP1-202ENST00000371146 PXYLP1Q8TE99 480 aa7.75□□□□□ -1.17
USP1-202ENST00000371146 ZNF333Q96JL9 665 aa7.75□□□□□ -1.17
USP1-202ENST00000371146 SENP7Q9BQF6 1050 aa7.75□□□□□ -1.17
USP1-202ENST00000371146 MTIF3Q9H2K0 278 aaKnown RBP7.75□□□□□ -1.17
USP1-202ENST00000371146 SLITRK6Q9H5Y7 841 aa7.75□□□□□ -1.17
USP1-202ENST00000371146 KMT5AQ9NQR1 393 aa7.75□□□□□ -1.17
USP1-202ENST00000371146 SAGE1Q9NXZ1 904 aa7.75□□□□□ -1.17
USP1-202ENST00000371146 SLC4A7Q9Y6M7 1214 aa7.75□□□□□ -1.17
USP1-202ENST00000371146 BCORQ6W2J9 1755 aa7.75□□□□□ -1.17
USP1-202ENST00000371146 GOLGA4Q13439 2230 aaKnown RBP7.75□□□□□ -1.17
USP1-202ENST00000371146 GADD45BO75293 160 aaPredicted RBP7.75□□□□□ -1.17
USP1-202ENST00000371146 MMP3P08254 477 aa7.75□□□□□ -1.17
USP1-202ENST00000371146 SCP2P22307 547 aa7.75□□□□□ -1.17
USP1-202ENST00000371146 GTF2F1P35269 517 aaKnown RBP eCLIP7.75□□□□□ -1.17
USP1-202ENST00000371146 PAK2Q13177 524 aa7.75□□□□□ -1.17
USP1-202ENST00000371146 PTPN21Q16825 1174 aa7.75□□□□□ -1.17
USP1-202ENST00000371146 C1QTNF12Q5T7M4 302 aa7.75□□□□□ -1.17
USP1-202ENST00000371146 IER5Q5VY09 327 aa7.75□□□□□ -1.17
USP1-202ENST00000371146 ADALQ6DHV7 355 aa7.75□□□□□ -1.17
USP1-202ENST00000371146 GDF6Q6KF10 455 aaPredicted RBP7.75□□□□□ -1.17
USP1-202ENST00000371146 SLFN12Q8IYM2 578 aa7.75□□□□□ -1.17
USP1-202ENST00000371146 PRPF31Q8WWY3 499 aaKnown RBP7.75□□□□□ -1.17
USP1-202ENST00000371146 IWS1Q96ST2 819 aa7.75□□□□□ -1.17
USP1-202ENST00000371146 ADAM2Q99965 735 aa7.75□□□□□ -1.17
USP1-202ENST00000371146 ADPGKQ9BRR6 497 aa7.75□□□□□ -1.17
USP1-202ENST00000371146 POLR3FQ9H1D9 316 aaPredicted RBP7.75□□□□□ -1.17
USP1-202ENST00000371146 TNMDQ9H2S6 317 aa7.75□□□□□ -1.17
USP1-202ENST00000371146 EXOC1Q9NV70 894 aa7.75□□□□□ -1.17
USP1-202ENST00000371146 OPLAHO14841 1288 aa7.74□□□□□ -1.17
USP1-202ENST00000371146 PRPF6O94906 941 aaKnown RBP7.74□□□□□ -1.17
USP1-202ENST00000371146 SUPT20HL2P0C7V6 817 aa7.74□□□□□ -1.17
USP1-202ENST00000371146 OR1G1P47890 313 aa7.74□□□□□ -1.17
USP1-202ENST00000371146 TFAMQ00059 246 aaKnown RBP7.74□□□□□ -1.17
USP1-202ENST00000371146 BTNL9Q6UXG8 535 aa7.74□□□□□ -1.17
USP1-202ENST00000371146 METTL16Q86W50 562 aaKnown RBP7.74□□□□□ -1.17
USP1-202ENST00000371146 ZNF579Q8NAF0 562 aaKnown RBP7.74□□□□□ -1.17
USP1-202ENST00000371146 MMS19Q96T76 1030 aa7.74□□□□□ -1.17
USP1-202ENST00000371146 LLPHQ9BRT6 129 aaKnown RBP7.74□□□□□ -1.17
USP1-202ENST00000371146 AGO4Q9HCK5 861 aaKnown RBP7.74□□□□□ -1.17
USP1-202ENST00000371146 WDR19Q8NEZ3 1342 aa7.74□□□□□ -1.17
USP1-202ENST00000371146 LPXNO60711 386 aa7.74□□□□□ -1.17
USP1-202ENST00000371146 CCNE2O96020 404 aa7.74□□□□□ -1.17
USP1-202ENST00000371146 FGBP02675 491 aa7.74□□□□□ -1.17
USP1-202ENST00000371146 P4HBP07237 508 aaKnown RBP7.74□□□□□ -1.17
USP1-202ENST00000371146 CLTBP09497 229 aa7.74□□□□□ -1.17
USP1-202ENST00000371146 SNHG28P0DPA3 235 aa7.74□□□□□ -1.17
USP1-202ENST00000371146 MYOGP15173 224 aa7.74□□□□□ -1.17
USP1-202ENST00000371146 TNNI1P19237 187 aa7.74□□□□□ -1.17
USP1-202ENST00000371146 MSNP26038 577 aaKnown RBP7.74□□□□□ -1.17
USP1-202ENST00000371146 PSMC5P62195 406 aa7.74□□□□□ -1.17
USP1-202ENST00000371146 CCDC173Q0VFZ6 552 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms