RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 PDRG1Q9NUG6 133 aa18.21■□□□□ 0.51
VMA21-202ENST00000370361 ST3GAL5Q9UNP4 418 aa18.21■□□□□ 0.51
VMA21-202ENST00000370361 PLAGL2Q9UPG8 496 aa18.21■□□□□ 0.51
VMA21-202ENST00000370361 NOC2LQ9Y3T9 749 aaKnown RBP18.21■□□□□ 0.51
VMA21-202ENST00000370361 MRPL42Q9Y6G3 142 aaKnown RBP18.21■□□□□ 0.51
VMA21-202ENST00000370361 STK36Q9NRP7 1315 aa18.21■□□□□ 0.51
VMA21-202ENST00000370361 WDR81Q562E7 1941 aa18.2■□□□□ 0.5
VMA21-202ENST00000370361 GRM6O15303 877 aa18.2■□□□□ 0.5
VMA21-202ENST00000370361 GPR32O75388 356 aa18.2■□□□□ 0.5
VMA21-202ENST00000370361 GCFC2P16383 781 aaKnown RBP18.2■□□□□ 0.5
VMA21-202ENST00000370361 PRKCEQ02156 737 aa18.2■□□□□ 0.5
VMA21-202ENST00000370361 NONOQ15233 471 aaKnown RBP eCLIP18.2■□□□□ 0.5
VMA21-202ENST00000370361 KIZQ2M2Z5 673 aa18.2■□□□□ 0.5
VMA21-202ENST00000370361 TMEM266Q2M3C6 531 aa18.2■□□□□ 0.5
VMA21-202ENST00000370361 CTC1Q2NKJ3 1217 aa18.2■□□□□ 0.5
VMA21-202ENST00000370361 MBOAT7Q96N66 472 aa18.2■□□□□ 0.5
VMA21-202ENST00000370361 ADAM2Q99965 735 aa18.2■□□□□ 0.5
VMA21-202ENST00000370361 TMEM161AQ9NX61 479 aa18.2■□□□□ 0.5
VMA21-202ENST00000370361 AKT3Q9Y243 479 aa18.2■□□□□ 0.5
VMA21-202ENST00000370361 PCDHB12Q9Y5F1 795 aa18.2■□□□□ 0.5
VMA21-202ENST00000370361 C9IYK1 514 aa18.19■□□□□ 0.5
VMA21-202ENST00000370361 M0R2N6 131 aa18.19■□□□□ 0.5
VMA21-202ENST00000370361 ADAMTS3O15072 1205 aa18.19■□□□□ 0.5
VMA21-202ENST00000370361 DKC1O60832 514 aaKnown RBP eCLIP18.19■□□□□ 0.5
VMA21-202ENST00000370361 PSMD10O75832 226 aa18.19■□□□□ 0.5
VMA21-202ENST00000370361 EIF4BP23588 611 aaKnown RBP18.19■□□□□ 0.5
VMA21-202ENST00000370361 TBC1D8BQ0IIM8 1120 aa18.19■□□□□ 0.5
VMA21-202ENST00000370361 PDE12Q6L8Q7 609 aaKnown RBP18.19■□□□□ 0.5
VMA21-202ENST00000370361 EFCAB12Q6NXP0 572 aa18.19■□□□□ 0.5
VMA21-202ENST00000370361 EXOC8Q8IYI6 725 aa18.19■□□□□ 0.5
VMA21-202ENST00000370361 LINC01465Q8N7H1 131 aa18.19■□□□□ 0.5
VMA21-202ENST00000370361 TMEM40Q8WWA1 233 aa18.19■□□□□ 0.5
VMA21-202ENST00000370361 OSMRQ99650 979 aa18.19■□□□□ 0.5
VMA21-202ENST00000370361 JPH2Q9BR39 696 aaPredicted RBP18.19■□□□□ 0.5
VMA21-202ENST00000370361 ATP6V0A4Q9HBG4 840 aa18.19■□□□□ 0.5
VMA21-202ENST00000370361 PPME1Q9Y570 386 aa18.19■□□□□ 0.5
VMA21-202ENST00000370361 CARNS1A5YM72 827 aa18.18■□□□□ 0.5
VMA21-202ENST00000370361 ZSCAN20P17040 1043 aaPredicted RBP18.18■□□□□ 0.5
VMA21-202ENST00000370361 COL9A1P20849 921 aa18.18■□□□□ 0.5
VMA21-202ENST00000370361 DNM2P50570 870 aa18.18■□□□□ 0.5
VMA21-202ENST00000370361 FAM189BP81408 668 aa18.18■□□□□ 0.5
VMA21-202ENST00000370361 XKR3Q5GH77 459 aa18.18■□□□□ 0.5
VMA21-202ENST00000370361 MIER3Q7Z3K6 550 aa18.18■□□□□ 0.5
VMA21-202ENST00000370361 FAM228AQ86W67 206 aa18.18■□□□□ 0.5
VMA21-202ENST00000370361 GJD3Q8N144 294 aa18.18■□□□□ 0.5
VMA21-202ENST00000370361 WASF1Q92558 559 aa18.18■□□□□ 0.5
VMA21-202ENST00000370361 FAM20AQ96MK3 541 aa18.18■□□□□ 0.5
VMA21-202ENST00000370361 POP1Q99575 1024 aaKnown RBP18.18■□□□□ 0.5
VMA21-202ENST00000370361 NIFKQ9BYG3 293 aaKnown RBP18.18■□□□□ 0.5
VMA21-202ENST00000370361 UPF3BQ9BZI7 483 aaKnown RBP18.18■□□□□ 0.5
VMA21-202ENST00000370361 SLKQ9H2G2 1235 aaPredicted RBP18.18■□□□□ 0.5
VMA21-202ENST00000370361 UNC45AQ9H3U1 944 aa18.18■□□□□ 0.5
VMA21-202ENST00000370361 CLDND1Q9NY35 253 aa18.18■□□□□ 0.5
VMA21-202ENST00000370361 ARIH1Q9Y4X5 557 aaPredicted RBP18.18■□□□□ 0.5
VMA21-202ENST00000370361 ZNF862O60290 1169 aa18.17■□□□□ 0.5
VMA21-202ENST00000370361 VTNP04004 478 aa18.17■□□□□ 0.5
VMA21-202ENST00000370361 NLRP11P59045 1033 aaKnown RBP18.17■□□□□ 0.5
VMA21-202ENST00000370361 DSC3Q14574 896 aa18.17■□□□□ 0.5
VMA21-202ENST00000370361 B3GNT9Q6UX72 402 aa18.17■□□□□ 0.5
VMA21-202ENST00000370361 KLHL23Q8NBE8 558 aa18.17■□□□□ 0.5
VMA21-202ENST00000370361 SPPL3Q8TCT6 385 aa18.17■□□□□ 0.5
VMA21-202ENST00000370361 ADAMTS10Q9H324 1103 aa18.17■□□□□ 0.5
VMA21-202ENST00000370361 CDHR5Q9HBB8 845 aa18.17■□□□□ 0.5
VMA21-202ENST00000370361 DACT1Q9NYF0 836 aa18.17■□□□□ 0.5
VMA21-202ENST00000370361 DDX25Q9UHL0 483 aaKnown RBP18.17■□□□□ 0.5
VMA21-202ENST00000370361 KIAA1671Q9BY89 1806 aa18.16■□□□□ 0.5
VMA21-202ENST00000370361 FNDC1Q4ZHG4 1894 aaPredicted RBP18.16■□□□□ 0.5
VMA21-202ENST00000370361 CCDC194A0A1B0GVG4 234 aa18.16■□□□□ 0.5
VMA21-202ENST00000370361 PI4K2BG5E9Z4 385 aa18.16■□□□□ 0.5
VMA21-202ENST00000370361 TBX3O15119 743 aa18.16■□□□□ 0.5
VMA21-202ENST00000370361 CHMP2AO43633 222 aa18.16■□□□□ 0.5
VMA21-202ENST00000370361 EDIL3O43854 480 aa18.16■□□□□ 0.5
VMA21-202ENST00000370361 ITGB1P05556 798 aa18.16■□□□□ 0.5
VMA21-202ENST00000370361 ALADP13716 330 aa18.16■□□□□ 0.5
VMA21-202ENST00000370361 LAG3P18627 525 aa18.16■□□□□ 0.5
VMA21-202ENST00000370361 CLCN3P51790 818 aa18.16■□□□□ 0.5
VMA21-202ENST00000370361 HYAL1Q12794 435 aa18.16■□□□□ 0.5
VMA21-202ENST00000370361 TARBP2Q15633 366 aaKnown RBP18.16■□□□□ 0.5
VMA21-202ENST00000370361 PAN2Q504Q3 1202 aaKnown RBP18.16■□□□□ 0.5
VMA21-202ENST00000370361 TMEM31Q5JXX7 168 aa18.16■□□□□ 0.5
VMA21-202ENST00000370361 PPP4R3AQ6IN85 833 aa18.16■□□□□ 0.5
VMA21-202ENST00000370361 ETNPPLQ8TBG4 499 aa18.16■□□□□ 0.5
VMA21-202ENST00000370361 SCLT1Q96NL6 688 aa18.16■□□□□ 0.5
VMA21-202ENST00000370361 CDCA3Q99618 268 aaPredicted RBP18.16■□□□□ 0.5
VMA21-202ENST00000370361 PHF20Q9BVI0 1012 aa18.16■□□□□ 0.5
VMA21-202ENST00000370361 INO80BQ9C086 356 aaPredicted RBP18.16■□□□□ 0.5
VMA21-202ENST00000370361 TMEM117Q9H0C3 514 aa18.16■□□□□ 0.5
VMA21-202ENST00000370361 ALG13Q9NP73 1137 aaKnown RBP18.16■□□□□ 0.5
VMA21-202ENST00000370361 CHST12Q9NRB3 414 aa18.16■□□□□ 0.5
VMA21-202ENST00000370361 LZTS1Q9Y250 596 aa18.16■□□□□ 0.5
VMA21-202ENST00000370361 ATG2AQ2TAZ0 1938 aa18.15■□□□□ 0.5
VMA21-202ENST00000370361 TBKBP1A7MCY6 615 aa18.15■□□□□ 0.5
VMA21-202ENST00000370361 H3BQ06 376 aaPredicted RBP18.15■□□□□ 0.5
VMA21-202ENST00000370361 MGEA5O60502 916 aa18.15■□□□□ 0.5
VMA21-202ENST00000370361 PFKFB2O60825 505 aa18.15■□□□□ 0.5
VMA21-202ENST00000370361 GPR37L1O60883 481 aa18.15■□□□□ 0.5
VMA21-202ENST00000370361 PPFIA3O75145 1194 aa18.15■□□□□ 0.5
VMA21-202ENST00000370361 DARSP14868 501 aaKnown RBP18.15■□□□□ 0.5
VMA21-202ENST00000370361 SSTR3P32745 418 aaPredicted RBP18.15■□□□□ 0.5
VMA21-202ENST00000370361 PPM1AP35813 382 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms