RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 IFFO1Q0D2I5 559 aa17.35■□□□□ 0.37
SYNCRIP-202ENST00000369622 PAK2Q13177 524 aa17.35■□□□□ 0.37
SYNCRIP-202ENST00000369622 SLC18A3Q16572 532 aa17.35■□□□□ 0.37
SYNCRIP-202ENST00000369622 COBLL1Q53SF7 1204 aa17.35■□□□□ 0.37
SYNCRIP-202ENST00000369622 DDX42Q86XP3 938 aaKnown RBP eCLIP17.35■□□□□ 0.37
SYNCRIP-202ENST00000369622 KIF2BQ8N4N8 673 aa17.35■□□□□ 0.37
SYNCRIP-202ENST00000369622 MDM1Q8TC05 714 aa17.35■□□□□ 0.37
SYNCRIP-202ENST00000369622 SCFD1Q8WVM8 642 aa17.35■□□□□ 0.37
SYNCRIP-202ENST00000369622 PLAAQ9Y263 795 aa17.35■□□□□ 0.37
SYNCRIP-202ENST00000369622 KIAA1551Q9HCM1 1747 aa17.35■□□□□ 0.37
SYNCRIP-202ENST00000369622 DPPA5A6NC42 116 aa17.34■□□□□ 0.37
SYNCRIP-202ENST00000369622 TTLL1O95922 423 aa17.34■□□□□ 0.37
SYNCRIP-202ENST00000369622 TUBP50607 506 aa17.34■□□□□ 0.37
SYNCRIP-202ENST00000369622 ITGB3BPQ13352 177 aaPredicted RBP17.34■□□□□ 0.37
SYNCRIP-202ENST00000369622 NAB2Q15742 525 aa17.34■□□□□ 0.37
SYNCRIP-202ENST00000369622 TMEM119Q4V9L6 283 aa17.34■□□□□ 0.37
SYNCRIP-202ENST00000369622 CWF19L1Q69YN2 538 aaKnown RBP17.34■□□□□ 0.37
SYNCRIP-202ENST00000369622 ERICH1Q86X53 443 aa17.34■□□□□ 0.37
SYNCRIP-202ENST00000369622 PROM2Q8N271 834 aa17.34■□□□□ 0.37
SYNCRIP-202ENST00000369622 DAGLAQ9Y4D2 1042 aa17.34■□□□□ 0.37
SYNCRIP-202ENST00000369622 CASP5P51878 434 aa17.34■□□□□ 0.37
SYNCRIP-202ENST00000369622 PTK2Q05397 1052 aa17.34■□□□□ 0.37
SYNCRIP-202ENST00000369622 DRP2Q13474 957 aa17.34■□□□□ 0.37
SYNCRIP-202ENST00000369622 RPS6KA1Q15418 735 aa17.34■□□□□ 0.37
SYNCRIP-202ENST00000369622 PRR16Q569H4 304 aa17.34■□□□□ 0.37
SYNCRIP-202ENST00000369622 CASKIN2Q8WXE0 1202 aa17.34■□□□□ 0.37
SYNCRIP-202ENST00000369622 RAD51CO43502 376 aa17.34■□□□□ 0.37
SYNCRIP-202ENST00000369622 KCNJ2P63252 427 aa17.34■□□□□ 0.37
SYNCRIP-202ENST00000369622 ITIH3Q06033 890 aa17.34■□□□□ 0.37
SYNCRIP-202ENST00000369622 ZNF543Q08ER8 600 aa17.34■□□□□ 0.37
SYNCRIP-202ENST00000369622 TCP10Q12799 353 aa17.34■□□□□ 0.37
SYNCRIP-202ENST00000369622 SLF2Q8IX21 1173 aa17.34■□□□□ 0.37
SYNCRIP-202ENST00000369622 PAGR1Q9BTK6 254 aa17.34■□□□□ 0.37
SYNCRIP-202ENST00000369622 DDX4Q9NQI0 724 aaKnown RBP17.34■□□□□ 0.37
SYNCRIP-202ENST00000369622 POLLQ9UGP5 575 aa17.34■□□□□ 0.37
SYNCRIP-202ENST00000369622 TSKSQ9UJT2 592 aa17.34■□□□□ 0.37
SYNCRIP-202ENST00000369622 PCDHA1Q9Y5I3 950 aa17.34■□□□□ 0.37
SYNCRIP-202ENST00000369622 SFI1A8K8P3 1242 aa17.33■□□□□ 0.37
SYNCRIP-202ENST00000369622 DCDC2CA8MYV0 355 aa17.33■□□□□ 0.37
SYNCRIP-202ENST00000369622 CLIC2O15247 247 aa17.33■□□□□ 0.37
SYNCRIP-202ENST00000369622 POLE2P56282 527 aa17.33■□□□□ 0.37
SYNCRIP-202ENST00000369622 PSMC6P62333 389 aa17.33■□□□□ 0.37
SYNCRIP-202ENST00000369622 MXRA7P84157 204 aa17.33■□□□□ 0.37
SYNCRIP-202ENST00000369622 USH1GQ495M9 461 aa17.33■□□□□ 0.37
SYNCRIP-202ENST00000369622 PPP1R15BQ5SWA1 713 aa17.33■□□□□ 0.37
SYNCRIP-202ENST00000369622 NT5C3AQ9H0P0 336 aa17.33■□□□□ 0.37
SYNCRIP-202ENST00000369622 HOMER3Q9NSC5 361 aa17.33■□□□□ 0.37
SYNCRIP-202ENST00000369622 NOP53Q9NZM5 478 aaKnown RBP17.33■□□□□ 0.37
SYNCRIP-202ENST00000369622 SERPINB13Q9UIV8 391 aa17.33■□□□□ 0.37
SYNCRIP-202ENST00000369622 HDAC9Q9UKV0 1011 aa17.33■□□□□ 0.37
SYNCRIP-202ENST00000369622 ROBO1Q9Y6N7 1651 aa17.33■□□□□ 0.37
SYNCRIP-202ENST00000369622 CCDC88AQ3V6T2 1871 aa17.33■□□□□ 0.37
SYNCRIP-202ENST00000369622 A6NNZ2 444 aa17.33■□□□□ 0.36
SYNCRIP-202ENST00000369622 FAM163BP0C2L3 166 aa17.33■□□□□ 0.36
SYNCRIP-202ENST00000369622 TAL1P17542 331 aaPredicted RBP17.33■□□□□ 0.36
SYNCRIP-202ENST00000369622 CACNB3P54284 484 aa17.33■□□□□ 0.36
SYNCRIP-202ENST00000369622 TUBB8Q3ZCM7 444 aa17.33■□□□□ 0.36
SYNCRIP-202ENST00000369622 ZCWPW2Q504Y3 356 aa17.33■□□□□ 0.36
SYNCRIP-202ENST00000369622 TRIM59Q8IWR1 403 aa17.33■□□□□ 0.36
SYNCRIP-202ENST00000369622 IQCKQ8N0W5 287 aa17.33■□□□□ 0.36
SYNCRIP-202ENST00000369622 RAPGEF5Q92565 580 aa17.33■□□□□ 0.36
SYNCRIP-202ENST00000369622 BCAS3Q9H6U6 928 aa17.33■□□□□ 0.36
SYNCRIP-202ENST00000369622 USP40Q9NVE5 1235 aa17.33■□□□□ 0.36
SYNCRIP-202ENST00000369622 CNOT8Q9UFF9 292 aaKnown RBP17.33■□□□□ 0.36
SYNCRIP-202ENST00000369622 CORO1CQ9ULV4 474 aaPredicted RBP17.33■□□□□ 0.36
SYNCRIP-202ENST00000369622 GRID2IPA4D2P6 1211 aa17.32■□□□□ 0.36
SYNCRIP-202ENST00000369622 MED24O75448 989 aa17.32■□□□□ 0.36
SYNCRIP-202ENST00000369622 C1QTNF12Q5T7M4 302 aa17.32■□□□□ 0.36
SYNCRIP-202ENST00000369622 ARMCX3Q9UH62 379 aaPredicted RBP17.32■□□□□ 0.36
SYNCRIP-202ENST00000369622 PCDHB13Q9Y5F0 798 aa17.32■□□□□ 0.36
SYNCRIP-202ENST00000369622 GOLGA6L10A6NI86 522 aa17.32■□□□□ 0.36
SYNCRIP-202ENST00000369622 CYP11B2P19099 503 aa17.32■□□□□ 0.36
SYNCRIP-202ENST00000369622 SMARCA1P28370 1054 aa17.32■□□□□ 0.36
SYNCRIP-202ENST00000369622 SHROOM1Q2M3G4 852 aaPredicted RBP17.32■□□□□ 0.36
SYNCRIP-202ENST00000369622 GKAP1Q5VSY0 366 aaPredicted RBP17.32■□□□□ 0.36
SYNCRIP-202ENST00000369622 PPP4R3AQ6IN85 833 aa17.32■□□□□ 0.36
SYNCRIP-202ENST00000369622 PRR5LQ6MZQ0 368 aa17.32■□□□□ 0.36
SYNCRIP-202ENST00000369622 SLC30A10Q6XR72 485 aa17.32■□□□□ 0.36
SYNCRIP-202ENST00000369622 ZFATQ9P243 1243 aa17.32■□□□□ 0.36
SYNCRIP-202ENST00000369622 LAMB1P07942 1786 aa17.32■□□□□ 0.36
SYNCRIP-202ENST00000369622 G3V3G9 751 aa17.31■□□□□ 0.36
SYNCRIP-202ENST00000369622 ZBTB5O15062 677 aa17.31■□□□□ 0.36
SYNCRIP-202ENST00000369622 NT5C2P49902 561 aa17.31■□□□□ 0.36
SYNCRIP-202ENST00000369622 ORC2Q13416 577 aaPredicted RBP17.31■□□□□ 0.36
SYNCRIP-202ENST00000369622 DOK7Q18PE1 504 aa17.31■□□□□ 0.36
SYNCRIP-202ENST00000369622 DCAF8Q5TAQ9 597 aa17.31■□□□□ 0.36
SYNCRIP-202ENST00000369622 GJB7Q6PEY0 223 aa17.31■□□□□ 0.36
SYNCRIP-202ENST00000369622 BARGINQ6ZT62 677 aa17.31■□□□□ 0.36
SYNCRIP-202ENST00000369622 ADAT2Q7Z6V5 191 aaKnown RBP17.31■□□□□ 0.36
SYNCRIP-202ENST00000369622 CCT6BQ92526 530 aa17.31■□□□□ 0.36
SYNCRIP-202ENST00000369622 TRIM31Q9BZY9 425 aa17.31■□□□□ 0.36
SYNCRIP-202ENST00000369622 DDX47Q9H0S4 455 aaKnown RBP17.31■□□□□ 0.36
SYNCRIP-202ENST00000369622 CHCHD3Q9NX63 227 aaKnown RBP17.31■□□□□ 0.36
SYNCRIP-202ENST00000369622 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.31■□□□□ 0.361e-7■■■■□ 25.6
SYNCRIP-202ENST00000369622 ABCB11O95342 1321 aa17.31■□□□□ 0.36
SYNCRIP-202ENST00000369622 ATP2B4P23634 1241 aa17.31■□□□□ 0.36
SYNCRIP-202ENST00000369622 TNNC1P63316 161 aa17.31■□□□□ 0.36
SYNCRIP-202ENST00000369622 GLE1Q53GS7 698 aaKnown RBP17.31■□□□□ 0.36
SYNCRIP-202ENST00000369622 MEI1Q5TIA1 1274 aa17.31■□□□□ 0.36
SYNCRIP-202ENST00000369622 ZNF572Q7Z3I7 529 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms