RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 TOB1P50616 345 aaPredicted RBP7.63□□□□□ -1.19
CSDE1-204ENST00000369530 LARP1BQ659C4 914 aaKnown RBP7.63□□□□□ -1.19
CSDE1-204ENST00000369530 E4F1Q66K89 784 aaPredicted RBP7.63□□□□□ -1.19
CSDE1-204ENST00000369530 FCHSD1Q86WN1 690 aa7.63□□□□□ -1.19
CSDE1-204ENST00000369530 NCAPG2Q86XI2 1143 aa7.63□□□□□ -1.19
CSDE1-204ENST00000369530 RAB11FIP4Q86YS3 637 aa7.63□□□□□ -1.19
CSDE1-204ENST00000369530 MSANTD4Q8NCY6 345 aa7.63□□□□□ -1.19
CSDE1-204ENST00000369530 CTCFLQ8NI51 663 aaPredicted RBP7.63□□□□□ -1.19
CSDE1-204ENST00000369530 MICAL1Q8TDZ2 1067 aa7.63□□□□□ -1.19
CSDE1-204ENST00000369530 PPP1R13BQ96KQ4 1090 aa7.63□□□□□ -1.19
CSDE1-204ENST00000369530 DEFB118Q96PH6 123 aa7.63□□□□□ -1.19
CSDE1-204ENST00000369530 MKNK2Q9HBH9 465 aa7.63□□□□□ -1.19
CSDE1-204ENST00000369530 ARFGAP3Q9NP61 516 aa7.63□□□□□ -1.19
CSDE1-204ENST00000369530 BATF3Q9NR55 127 aa7.63□□□□□ -1.19
CSDE1-204ENST00000369530 ASB14A6NK59 587 aa7.62□□□□□ -1.19
CSDE1-204ENST00000369530 CCP110O43303 1012 aa7.62□□□□□ -1.19
CSDE1-204ENST00000369530 GPR32O75388 356 aa7.62□□□□□ -1.19
CSDE1-204ENST00000369530 ADRB2P07550 413 aa7.62□□□□□ -1.19
CSDE1-204ENST00000369530 TRIM65Q6PJ69 517 aa7.62□□□□□ -1.19
CSDE1-204ENST00000369530 SPATS2Q86XZ4 545 aaKnown RBP7.62□□□□□ -1.19
CSDE1-204ENST00000369530 STRA6Q9BX79 667 aa7.62□□□□□ -1.19
CSDE1-204ENST00000369530 UBA5Q9GZZ9 404 aa7.62□□□□□ -1.19
CSDE1-204ENST00000369530 SPATS2LQ9NUQ6 558 aaKnown RBP7.62□□□□□ -1.19
CSDE1-204ENST00000369530 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.62□□□□□ -1.19
CSDE1-204ENST00000369530 GGA2Q9UJY4 613 aa7.62□□□□□ -1.19
CSDE1-204ENST00000369530 COL1A2P08123 1366 aa7.62□□□□□ -1.19
CSDE1-204ENST00000369530 RBAK-RBAKDNI3L0D1 243 aa7.62□□□□□ -1.19
CSDE1-204ENST00000369530 LYPLA2O95372 231 aa7.62□□□□□ -1.19
CSDE1-204ENST00000369530 CCNHP51946 323 aaPredicted RBP7.62□□□□□ -1.19
CSDE1-204ENST00000369530 FAM189BP81408 668 aa7.62□□□□□ -1.19
CSDE1-204ENST00000369530 SMAD3P84022 425 aaKnown RBP7.62□□□□□ -1.19
CSDE1-204ENST00000369530 TYRO3Q06418 890 aa7.62□□□□□ -1.19
CSDE1-204ENST00000369530 PPP2R5CQ13362 524 aa7.62□□□□□ -1.19
CSDE1-204ENST00000369530 ZYXQ15942 572 aaKnown RBP7.62□□□□□ -1.19
CSDE1-204ENST00000369530 RRP12Q5JTH9 1297 aaKnown RBP7.62□□□□□ -1.19
CSDE1-204ENST00000369530 TMEM240Q5SV17 173 aa7.62□□□□□ -1.19
CSDE1-204ENST00000369530 UBXN4Q92575 508 aa7.62□□□□□ -1.19
CSDE1-204ENST00000369530 BRF1Q92994 677 aa7.62□□□□□ -1.19
CSDE1-204ENST00000369530 SQORQ9Y6N5 450 aa7.62□□□□□ -1.19
CSDE1-204ENST00000369530 PLXND1Q9Y4D7 1925 aa7.62□□□□□ -1.19
CSDE1-204ENST00000369530 KAT6AQ92794 2004 aa7.62□□□□□ -1.19
CSDE1-204ENST00000369530 NBNO60934 754 aa7.62□□□□□ -1.19
CSDE1-204ENST00000369530 GJB2P29033 226 aa7.62□□□□□ -1.19
CSDE1-204ENST00000369530 RAB27AP51159 221 aa7.62□□□□□ -1.19
CSDE1-204ENST00000369530 CCT2P78371 535 aaKnown RBP7.62□□□□□ -1.19
CSDE1-204ENST00000369530 SNW1Q13573 536 aaKnown RBP7.62□□□□□ -1.19
CSDE1-204ENST00000369530 IQCB1Q15051 598 aa7.62□□□□□ -1.19
CSDE1-204ENST00000369530 ARHGEF6Q15052 776 aa7.62□□□□□ -1.19
CSDE1-204ENST00000369530 HSDL1Q3SXM5 330 aa7.62□□□□□ -1.19
CSDE1-204ENST00000369530 TTC19Q6DKK2 380 aaPredicted RBP7.62□□□□□ -1.19
CSDE1-204ENST00000369530 PLPPR4Q7Z2D5 763 aa7.62□□□□□ -1.19
CSDE1-204ENST00000369530 NIFKQ9BYG3 293 aaKnown RBP7.62□□□□□ -1.19
CSDE1-204ENST00000369530 ADAMTS10Q9H324 1103 aa7.62□□□□□ -1.19
CSDE1-204ENST00000369530 UMODL1Q5DID0 1318 aa7.61□□□□□ -1.19
CSDE1-204ENST00000369530 ABLIM1O14639 778 aa7.61□□□□□ -1.19
CSDE1-204ENST00000369530 ASGR1P07306 291 aa7.61□□□□□ -1.19
CSDE1-204ENST00000369530 SLC3A2P08195 630 aaKnown RBP7.61□□□□□ -1.19
CSDE1-204ENST00000369530 PARP1P09874 1014 aaKnown RBP7.61□□□□□ -1.19
CSDE1-204ENST00000369530 ZSCAN22P10073 491 aaPredicted RBP7.61□□□□□ -1.19
CSDE1-204ENST00000369530 CYP2B6P20813 491 aa7.61□□□□□ -1.19
CSDE1-204ENST00000369530 MNAT1P51948 309 aa7.61□□□□□ -1.19
CSDE1-204ENST00000369530 ETF1P62495 437 aaKnown RBP7.61□□□□□ -1.19
CSDE1-204ENST00000369530 KRT32Q14532 448 aa7.61□□□□□ -1.19
CSDE1-204ENST00000369530 BEND6Q5SZJ8 279 aaPredicted RBP7.61□□□□□ -1.19
CSDE1-204ENST00000369530 IFIT1BQ5T764 474 aaKnown RBP7.61□□□□□ -1.19
CSDE1-204ENST00000369530 FBXO16Q8IX29 292 aaPredicted RBP7.61□□□□□ -1.19
CSDE1-204ENST00000369530 AMNQ9BXJ7 453 aa7.61□□□□□ -1.19
CSDE1-204ENST00000369530 ATP6V0A4Q9HBG4 840 aa7.61□□□□□ -1.19
CSDE1-204ENST00000369530 ZBED4O75132 1171 aa7.61□□□□□ -1.19
CSDE1-204ENST00000369530 SKILP12757 684 aa7.61□□□□□ -1.19
CSDE1-204ENST00000369530 RBBP5Q15291 538 aaKnown RBP7.61□□□□□ -1.19
CSDE1-204ENST00000369530 Q6ZUG5 572 aa7.61□□□□□ -1.19
CSDE1-204ENST00000369530 OR8K1Q8NGG5 319 aa7.61□□□□□ -1.19
CSDE1-204ENST00000369530 KIFC2Q96AC6 838 aa7.61□□□□□ -1.19
CSDE1-204ENST00000369530 PRPF6O94906 941 aaKnown RBP7.61□□□□□ -1.19
CSDE1-204ENST00000369530 CEBPZQ03701 1054 aaKnown RBP7.61□□□□□ -1.19
CSDE1-204ENST00000369530 AP3B2Q13367 1082 aa7.61□□□□□ -1.19
CSDE1-204ENST00000369530 LONRF2Q1L5Z9 754 aa7.61□□□□□ -1.19
CSDE1-204ENST00000369530 FILIP1LQ4L180 1135 aa7.61□□□□□ -1.19
CSDE1-204ENST00000369530 GDF6Q6KF10 455 aaPredicted RBP7.61□□□□□ -1.19
CSDE1-204ENST00000369530 MFSD5Q6N075 450 aa7.61□□□□□ -1.19
CSDE1-204ENST00000369530 DNAJC14Q6Y2X3 702 aaPredicted RBP7.61□□□□□ -1.19
CSDE1-204ENST00000369530 SDCCAG8Q86SQ7 713 aaPredicted RBP7.61□□□□□ -1.19
CSDE1-204ENST00000369530 SENP6Q9GZR1 1112 aaPredicted RBP7.61□□□□□ -1.19
CSDE1-204ENST00000369530 SUDS3Q9H7L9 328 aaPredicted RBP7.61□□□□□ -1.19
CSDE1-204ENST00000369530 CPLX1O14810 134 aa7.6□□□□□ -1.19
CSDE1-204ENST00000369530 LIN7AO14910 233 aaPredicted RBP7.6□□□□□ -1.19
CSDE1-204ENST00000369530 FAM189A1O60320 539 aa7.6□□□□□ -1.19
CSDE1-204ENST00000369530 CABYRO75952 493 aa7.6□□□□□ -1.19
CSDE1-204ENST00000369530 NEBLO76041 1014 aa7.6□□□□□ -1.19
CSDE1-204ENST00000369530 SEC31AO94979 1220 aaKnown RBP7.6□□□□□ -1.19
CSDE1-204ENST00000369530 TUBBP07437 444 aa7.6□□□□□ -1.19
CSDE1-204ENST00000369530 MAGEA10P43363 369 aaPredicted RBP7.6□□□□□ -1.19
CSDE1-204ENST00000369530 UBXN2AP68543 259 aa7.6□□□□□ -1.19
CSDE1-204ENST00000369530 ANKRD1Q15327 319 aa7.6□□□□□ -1.19
CSDE1-204ENST00000369530 NAB2Q15742 525 aa7.6□□□□□ -1.19
CSDE1-204ENST00000369530 TRIM60Q495X7 471 aa7.6□□□□□ -1.19
CSDE1-204ENST00000369530 PLEKHG4Q58EX7 1191 aa7.6□□□□□ -1.19
CSDE1-204ENST00000369530 RNF207Q6ZRF8 634 aa7.6□□□□□ -1.19
CSDE1-204ENST00000369530 RTN4RL1Q86UN2 441 aaPredicted RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms