RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 DR1Q01658 176 aa13.35□□□□□ -0.27
PHGDH-201ENST00000369407 ATXN2LQ8WWM7 1075 aaKnown RBP13.35□□□□□ -0.27
PHGDH-201ENST00000369407 SWAP70Q9UH65 585 aa13.35□□□□□ -0.27
PHGDH-201ENST00000369407 TMEM110-MUSTN1A8MSY1 372 aa13.34□□□□□ -0.27
PHGDH-201ENST00000369407 CCDC188H7C350 402 aa13.34□□□□□ -0.27
PHGDH-201ENST00000369407 RGS16O15492 202 aaPredicted RBP13.34□□□□□ -0.27
PHGDH-201ENST00000369407 CLSTN1O94985 981 aa13.34□□□□□ -0.27
PHGDH-201ENST00000369407 CDK8P49336 464 aa13.34□□□□□ -0.27
PHGDH-201ENST00000369407 GRIPAP1Q4V328 841 aa13.34□□□□□ -0.27
PHGDH-201ENST00000369407 CCDC25Q86WR0 208 aa13.34□□□□□ -0.27
PHGDH-201ENST00000369407 C3orf20Q8ND61 904 aa13.34□□□□□ -0.27
PHGDH-201ENST00000369407 C18orf8Q96DM3 657 aa13.34□□□□□ -0.27
PHGDH-201ENST00000369407 PLCD4Q9BRC7 762 aa13.34□□□□□ -0.27
PHGDH-201ENST00000369407 ARMCX3Q9UH62 379 aaPredicted RBP13.34□□□□□ -0.27
PHGDH-201ENST00000369407 PCDHA12Q9UN75 941 aa13.34□□□□□ -0.27
PHGDH-201ENST00000369407 POTEFA5A3E0 1075 aa13.34□□□□□ -0.27
PHGDH-201ENST00000369407 RAD21O60216 631 aa13.34□□□□□ -0.27
PHGDH-201ENST00000369407 DIAPH2O60879 1101 aa13.34□□□□□ -0.27
PHGDH-201ENST00000369407 FLOT1O75955 427 aa13.34□□□□□ -0.27
PHGDH-201ENST00000369407 POTEIP0CG38 1075 aa13.34□□□□□ -0.27
PHGDH-201ENST00000369407 CREB1P16220 341 aa13.34□□□□□ -0.27
PHGDH-201ENST00000369407 SLC16A2P36021 539 aa13.34□□□□□ -0.27
PHGDH-201ENST00000369407 ADCY1Q08828 1119 aa13.34□□□□□ -0.27
PHGDH-201ENST00000369407 KCNA1Q09470 495 aa13.34□□□□□ -0.27
PHGDH-201ENST00000369407 IFI16Q16666 785 aaKnown RBP13.34□□□□□ -0.27
PHGDH-201ENST00000369407 DENND2CQ68D51 928 aa13.34□□□□□ -0.27
PHGDH-201ENST00000369407 POTEGQ6S5H5 508 aa13.34□□□□□ -0.27
PHGDH-201ENST00000369407 POTEEQ6S8J3 1075 aa13.34□□□□□ -0.27
PHGDH-201ENST00000369407 FMNL3Q8IVF7 1028 aa13.34□□□□□ -0.27
PHGDH-201ENST00000369407 CCDC65Q8IXS2 484 aa13.34□□□□□ -0.27
PHGDH-201ENST00000369407 SLC35G2Q8TBE7 412 aa13.34□□□□□ -0.27
PHGDH-201ENST00000369407 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.34□□□□□ -0.27
PHGDH-201ENST00000369407 CEP63Q96MT8 703 aa13.34□□□□□ -0.27
PHGDH-201ENST00000369407 FAM114A2Q9NRY5 505 aa13.34□□□□□ -0.27
PHGDH-201ENST00000369407 SAMD15Q9P1V8 674 aa13.34□□□□□ -0.27
PHGDH-201ENST00000369407 AMFRQ9UKV5 643 aa13.34□□□□□ -0.27
PHGDH-201ENST00000369407 STXBP5LQ9Y2K9 1186 aa13.34□□□□□ -0.27
PHGDH-201ENST00000369407 PCDHB13Q9Y5F0 798 aa13.34□□□□□ -0.27
PHGDH-201ENST00000369407 PCDHA2Q9Y5H9 948 aa13.34□□□□□ -0.27
PHGDH-201ENST00000369407 PPFIA2O75334 1257 aa13.34□□□□□ -0.27
PHGDH-201ENST00000369407 LDHBP07195 334 aaKnown RBP13.34□□□□□ -0.27
PHGDH-201ENST00000369407 CRYMQ14894 314 aa13.34□□□□□ -0.27
PHGDH-201ENST00000369407 DPY19L2P1Q6NXN4 242 aa13.34□□□□□ -0.27
PHGDH-201ENST00000369407 TRPM8Q7Z2W7 1104 aa13.34□□□□□ -0.27
PHGDH-201ENST00000369407 KSR1Q8IVT5 923 aa13.34□□□□□ -0.27
PHGDH-201ENST00000369407 SLITRK6Q9H5Y7 841 aa13.34□□□□□ -0.27
PHGDH-201ENST00000369407 DAAM1Q9Y4D1 1078 aa13.34□□□□□ -0.27
PHGDH-201ENST00000369407 GOLGB1Q14789 3259 aaKnown RBP13.33□□□□□ -0.27
PHGDH-201ENST00000369407 SFI1A8K8P3 1242 aa13.33□□□□□ -0.28
PHGDH-201ENST00000369407 AKAP3O75969 853 aa13.33□□□□□ -0.28
PHGDH-201ENST00000369407 RPS8P62241 208 aaKnown RBP13.33□□□□□ -0.28
PHGDH-201ENST00000369407 PSMC6P62333 389 aa13.33□□□□□ -0.28
PHGDH-201ENST00000369407 POU5F1Q01860 360 aaKnown RBP13.33□□□□□ -0.28
PHGDH-201ENST00000369407 CEP120Q8N960 986 aa13.33□□□□□ -0.28
PHGDH-201ENST00000369407 LNX1Q8TBB1 728 aaPredicted RBP13.33□□□□□ -0.28
PHGDH-201ENST00000369407 NEK9Q8TD19 979 aa13.33□□□□□ -0.28
PHGDH-201ENST00000369407 KCNV2Q8TDN2 545 aa13.33□□□□□ -0.28
PHGDH-201ENST00000369407 PARD3BQ8TEW8 1205 aa13.33□□□□□ -0.28
PHGDH-201ENST00000369407 ARHGEF26Q96DR7 871 aa13.33□□□□□ -0.28
PHGDH-201ENST00000369407 SPDL1Q96EA4 605 aa13.33□□□□□ -0.28
PHGDH-201ENST00000369407 RSRC1Q96IZ7 334 aaKnown RBP13.33□□□□□ -0.28
PHGDH-201ENST00000369407 TAS2R14Q9NYV8 317 aa13.33□□□□□ -0.28
PHGDH-201ENST00000369407 G3BP2Q9UN86 482 aaKnown RBP13.33□□□□□ -0.28
PHGDH-201ENST00000369407 PTPN22Q9Y2R2 807 aa13.33□□□□□ -0.28
PHGDH-201ENST00000369407 BHMG1C9JSJ3 638 aaPredicted RBP13.33□□□□□ -0.28
PHGDH-201ENST00000369407 AFPP02771 609 aaKnown RBP13.33□□□□□ -0.28
PHGDH-201ENST00000369407 GHRP10912 638 aa13.33□□□□□ -0.28
PHGDH-201ENST00000369407 RFC4P35249 363 aa13.33□□□□□ -0.28
PHGDH-201ENST00000369407 ALDH5A1P51649 535 aaPredicted RBP13.33□□□□□ -0.28
PHGDH-201ENST00000369407 PABPC4Q13310 644 aaKnown RBP eCLIP13.33□□□□□ -0.289e-7■■■■□ 21.6
PHGDH-201ENST00000369407 CNOT10Q9H9A5 744 aaKnown RBP13.33□□□□□ -0.28
PHGDH-201ENST00000369407 ZDHHC18Q9NUE0 388 aa13.33□□□□□ -0.28
PHGDH-201ENST00000369407 GCNT4Q9P109 453 aa13.33□□□□□ -0.28
PHGDH-201ENST00000369407 SUCLA2Q9P2R7 463 aaPredicted RBP13.33□□□□□ -0.28
PHGDH-201ENST00000369407 PNMA3Q9UL41 463 aa13.33□□□□□ -0.28
PHGDH-201ENST00000369407 SLC12A4Q9UP95 1085 aa13.33□□□□□ -0.28
PHGDH-201ENST00000369407 CES2O00748 559 aa13.32□□□□□ -0.28
PHGDH-201ENST00000369407 RTN2O75298 545 aa13.32□□□□□ -0.28
PHGDH-201ENST00000369407 PLCG2P16885 1265 aa13.32□□□□□ -0.28
PHGDH-201ENST00000369407 CYP11B2P19099 503 aa13.32□□□□□ -0.28
PHGDH-201ENST00000369407 ZKSCAN8Q15776 578 aaPredicted RBP13.32□□□□□ -0.28
PHGDH-201ENST00000369407 ARSHQ5FYA8 562 aa13.32□□□□□ -0.28
PHGDH-201ENST00000369407 TTBK2Q6IQ55 1244 aa13.32□□□□□ -0.28
PHGDH-201ENST00000369407 ARMC9Q7Z3E5 817 aa13.32□□□□□ -0.28
PHGDH-201ENST00000369407 HOOK3Q86VS8 718 aa13.32□□□□□ -0.28
PHGDH-201ENST00000369407 PALB2Q86YC2 1186 aa13.32□□□□□ -0.28
PHGDH-201ENST00000369407 RASGEF1CQ8N431 466 aa13.32□□□□□ -0.28
PHGDH-201ENST00000369407 EIF1ADQ8N9N8 165 aaKnown RBP13.32□□□□□ -0.28
PHGDH-201ENST00000369407 LZTS2Q9BRK4 669 aa13.32□□□□□ -0.28
PHGDH-201ENST00000369407 ERP44Q9BS26 406 aa13.32□□□□□ -0.28
PHGDH-201ENST00000369407 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.32□□□□□ -0.282e-6■■■■□ 25.6
PHGDH-201ENST00000369407 FGFR1OP2Q9NVK5 253 aa13.32□□□□□ -0.28
PHGDH-201ENST00000369407 DNAJC17Q9NVM6 304 aaKnown RBP13.32□□□□□ -0.28
PHGDH-201ENST00000369407 RSPH10B2B2RC85 870 aa13.32□□□□□ -0.28
PHGDH-201ENST00000369407 IGF2BP3O00425 579 aaKnown RBP eCLIP13.32□□□□□ -0.28
PHGDH-201ENST00000369407 GNA14O95837 355 aa13.32□□□□□ -0.28
PHGDH-201ENST00000369407 RSPH10BP0C881 870 aa13.32□□□□□ -0.28
PHGDH-201ENST00000369407 XRCC5P13010 732 aaKnown RBP13.32□□□□□ -0.28
PHGDH-201ENST00000369407 MARCKSL1P49006 195 aa13.32□□□□□ -0.28
PHGDH-201ENST00000369407 PDIA5Q14554 519 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms