RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 DHX34Q14147 1143 aaKnown RBP11.42□□□□□ -0.58
LYSMD1-201ENST00000368908 PDIA5Q14554 519 aa11.42□□□□□ -0.58
LYSMD1-201ENST00000368908 NBPF20Q3BBV1 942 aa11.42□□□□□ -0.58
LYSMD1-201ENST00000368908 DYMQ7RTS9 669 aa11.42□□□□□ -0.58
LYSMD1-201ENST00000368908 ZNF571Q7Z3V5 609 aaPredicted RBP11.42□□□□□ -0.58
LYSMD1-201ENST00000368908 APLFQ8IW19 511 aaPredicted RBP11.42□□□□□ -0.58
LYSMD1-201ENST00000368908 KIRREL3Q8IZU9 778 aa11.42□□□□□ -0.58
LYSMD1-201ENST00000368908 NAP1L3Q99457 506 aaPredicted RBP11.42□□□□□ -0.58
LYSMD1-201ENST00000368908 DPH5Q9H2P9 285 aa11.42□□□□□ -0.58
LYSMD1-201ENST00000368908 ABCF3Q9NUQ8 709 aa11.42□□□□□ -0.58
LYSMD1-201ENST00000368908 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.42□□□□□ -0.58
LYSMD1-201ENST00000368908 ROBO3Q96MS0 1386 aa11.42□□□□□ -0.58
LYSMD1-201ENST00000368908 NCANO14594 1321 aa11.42□□□□□ -0.58
LYSMD1-201ENST00000368908 ESYT2A0FGR8 921 aa11.42□□□□□ -0.58
LYSMD1-201ENST00000368908 PALM3A6NDB9 673 aaPredicted RBP11.42□□□□□ -0.58
LYSMD1-201ENST00000368908 RGS16O15492 202 aaPredicted RBP11.42□□□□□ -0.58
LYSMD1-201ENST00000368908 CYTH3O43739 400 aa11.42□□□□□ -0.58
LYSMD1-201ENST00000368908 UBOX5O94941 541 aa11.42□□□□□ -0.58
LYSMD1-201ENST00000368908 KLRC3Q07444 240 aa11.42□□□□□ -0.58
LYSMD1-201ENST00000368908 BNIP1Q12981 228 aa11.42□□□□□ -0.58
LYSMD1-201ENST00000368908 R3HDM1Q15032 1099 aaKnown RBP11.42□□□□□ -0.58
LYSMD1-201ENST00000368908 FAM133BQ5BKY9 247 aaKnown RBP11.42□□□□□ -0.58
LYSMD1-201ENST00000368908 CMPK2Q5EBM0 449 aa11.42□□□□□ -0.58
LYSMD1-201ENST00000368908 ALKBH5Q6P6C2 394 aaKnown RBP11.42□□□□□ -0.58
LYSMD1-201ENST00000368908 TEX9Q8N6V9 391 aa11.42□□□□□ -0.58
LYSMD1-201ENST00000368908 ZNF384Q8TF68 577 aa11.42□□□□□ -0.58
LYSMD1-201ENST00000368908 DDX12PQ92771 950 aa11.42□□□□□ -0.58
LYSMD1-201ENST00000368908 ERP44Q9BS26 406 aa11.42□□□□□ -0.58
LYSMD1-201ENST00000368908 ECT2Q9H8V3 914 aa11.42□□□□□ -0.58
LYSMD1-201ENST00000368908 L3MBTL1Q9Y468 752 aa11.42□□□□□ -0.58
LYSMD1-201ENST00000368908 USP15Q9Y4E8 981 aaPredicted RBP11.42□□□□□ -0.58
LYSMD1-201ENST00000368908 A6NHS1 94 aa11.41□□□□□ -0.58
LYSMD1-201ENST00000368908 RGL2O15211 777 aa11.41□□□□□ -0.58
LYSMD1-201ENST00000368908 H2AFZP0C0S5 128 aa11.41□□□□□ -0.58
LYSMD1-201ENST00000368908 UBE4AQ14139 1066 aa11.41□□□□□ -0.58
LYSMD1-201ENST00000368908 FAM26FQ5R3K3 315 aa11.41□□□□□ -0.58
LYSMD1-201ENST00000368908 AP1ARQ63HQ0 302 aa11.41□□□□□ -0.58
LYSMD1-201ENST00000368908 DPY19L2P1Q6NXN4 242 aa11.41□□□□□ -0.58
LYSMD1-201ENST00000368908 H2AFVQ71UI9 128 aa11.41□□□□□ -0.58
LYSMD1-201ENST00000368908 DNAJC19Q96DA6 116 aa11.41□□□□□ -0.58
LYSMD1-201ENST00000368908 ARHGEF3Q9NR81 526 aa11.41□□□□□ -0.58
LYSMD1-201ENST00000368908 IGF2BP3O00425 579 aaKnown RBP eCLIP11.41□□□□□ -0.58
LYSMD1-201ENST00000368908 ABLIM1O14639 778 aa11.41□□□□□ -0.58
LYSMD1-201ENST00000368908 DIAPH2O60879 1101 aa11.41□□□□□ -0.58
LYSMD1-201ENST00000368908 SKAP2O75563 359 aaPredicted RBP11.41□□□□□ -0.58
LYSMD1-201ENST00000368908 SHBGP04278 402 aa11.41□□□□□ -0.58
LYSMD1-201ENST00000368908 VIMP08670 466 aaKnown RBP11.41□□□□□ -0.58
LYSMD1-201ENST00000368908 SKIV2L2P42285 1042 aaKnown RBP11.41□□□□□ -0.58
LYSMD1-201ENST00000368908 NAPAP54920 295 aa11.41□□□□□ -0.58
LYSMD1-201ENST00000368908 INHBEP58166 350 aa11.41□□□□□ -0.58
LYSMD1-201ENST00000368908 COPS2P61201 443 aa11.41□□□□□ -0.58
LYSMD1-201ENST00000368908 KCNJ2P63252 427 aa11.41□□□□□ -0.58
LYSMD1-201ENST00000368908 LACTBP83111 547 aaPredicted RBP11.41□□□□□ -0.58
LYSMD1-201ENST00000368908 ARID5AQ03989 594 aa11.41□□□□□ -0.58
LYSMD1-201ENST00000368908 EDRF1Q3B7T1 1238 aa11.41□□□□□ -0.58
LYSMD1-201ENST00000368908 MFSD5Q6N075 450 aa11.41□□□□□ -0.58
LYSMD1-201ENST00000368908 TAOK1Q7L7X3 1001 aa11.41□□□□□ -0.58
LYSMD1-201ENST00000368908 VPS36Q86VN1 386 aa11.41□□□□□ -0.58
LYSMD1-201ENST00000368908 AMIGO3Q86WK7 504 aa11.41□□□□□ -0.58
LYSMD1-201ENST00000368908 TRIM51Q9BSJ1 452 aa11.41□□□□□ -0.58
LYSMD1-201ENST00000368908 CELF4Q9BZC1 486 aaKnown RBP11.41□□□□□ -0.58
LYSMD1-201ENST00000368908 AZI2Q9H6S1 392 aa11.41□□□□□ -0.58
LYSMD1-201ENST00000368908 RASAL2Q9UJF2 1139 aa11.41□□□□□ -0.58
LYSMD1-201ENST00000368908 AMFRQ9UKV5 643 aa11.41□□□□□ -0.58
LYSMD1-201ENST00000368908 ZBTB1Q9Y2K1 713 aa11.41□□□□□ -0.58
LYSMD1-201ENST00000368908 DAAM1Q9Y4D1 1078 aa11.41□□□□□ -0.58
LYSMD1-201ENST00000368908 SUN1O94901 812 aa11.4□□□□□ -0.58
LYSMD1-201ENST00000368908 EPS15P42566 896 aa11.4□□□□□ -0.58
LYSMD1-201ENST00000368908 DR1Q01658 176 aa11.4□□□□□ -0.58
LYSMD1-201ENST00000368908 LRRC41Q15345 812 aa11.4□□□□□ -0.58
LYSMD1-201ENST00000368908 CNGA2Q16280 664 aa11.4□□□□□ -0.58
LYSMD1-201ENST00000368908 CALCRLQ16602 461 aa11.4□□□□□ -0.58
LYSMD1-201ENST00000368908 TRAPPC3LQ5T215 181 aa11.4□□□□□ -0.58
LYSMD1-201ENST00000368908 ASRGL1Q7L266 308 aa11.4□□□□□ -0.58
LYSMD1-201ENST00000368908 RNF25Q96BH1 459 aaPredicted RBP11.4□□□□□ -0.58
LYSMD1-201ENST00000368908 NSUN4Q96CB9 384 aaKnown RBP11.4□□□□□ -0.58
LYSMD1-201ENST00000368908 PRMT1Q99873 361 aaKnown RBP11.4□□□□□ -0.58
LYSMD1-201ENST00000368908 CARD9Q9H257 536 aa11.4□□□□□ -0.58
LYSMD1-201ENST00000368908 KIF9Q9HAQ2 790 aa11.4□□□□□ -0.58
LYSMD1-201ENST00000368908 IL17RBQ9NRM6 502 aa11.4□□□□□ -0.58
LYSMD1-201ENST00000368908 PARP2Q9UGN5 583 aa11.4□□□□□ -0.58
LYSMD1-201ENST00000368908 NAV1Q8NEY1 1877 aa11.4□□□□□ -0.59
LYSMD1-201ENST00000368908 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.4□□□□□ -0.59
LYSMD1-201ENST00000368908 SLC26A4O43511 780 aa11.4□□□□□ -0.59
LYSMD1-201ENST00000368908 AHCYL1O43865 530 aa11.4□□□□□ -0.59
LYSMD1-201ENST00000368908 GJB6O95452 261 aa11.4□□□□□ -0.59
LYSMD1-201ENST00000368908 FESP07332 822 aa11.4□□□□□ -0.59
LYSMD1-201ENST00000368908 SMARCA1P28370 1054 aa11.4□□□□□ -0.59
LYSMD1-201ENST00000368908 TXKP42681 527 aa11.4□□□□□ -0.59
LYSMD1-201ENST00000368908 RWDD2BP57060 319 aa11.4□□□□□ -0.59
LYSMD1-201ENST00000368908 TFAP4Q01664 338 aa11.4□□□□□ -0.59
LYSMD1-201ENST00000368908 MAP2K1Q02750 393 aaPredicted RBP11.4□□□□□ -0.59
LYSMD1-201ENST00000368908 PPARDQ03181 441 aa11.4□□□□□ -0.59
LYSMD1-201ENST00000368908 EVX2Q03828 476 aa11.4□□□□□ -0.59
LYSMD1-201ENST00000368908 CCDC38Q502W7 563 aa11.4□□□□□ -0.59
LYSMD1-201ENST00000368908 KRT79Q5XKE5 535 aa11.4□□□□□ -0.59
LYSMD1-201ENST00000368908 DAAM2Q86T65 1068 aa11.4□□□□□ -0.59
LYSMD1-201ENST00000368908 GLIS3Q8NEA6 775 aa11.4□□□□□ -0.59
LYSMD1-201ENST00000368908 TBC1D16Q8TBP0 767 aa11.4□□□□□ -0.59
LYSMD1-201ENST00000368908 TBCKQ8TEA7 893 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms