RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 SPOUT1Q5T280 376 aaKnown RBP11.76□□□□□ -0.53
CLRN3-201ENST00000368671 MIS18BP1Q6P0N0 1132 aa11.76□□□□□ -0.53
CLRN3-201ENST00000368671 PDXDC2PQ6P474 469 aa11.76□□□□□ -0.53
CLRN3-201ENST00000368671 ABHD15Q6UXT9 468 aa11.76□□□□□ -0.53
CLRN3-201ENST00000368671 TRMT1LQ7Z2T5 733 aaKnown RBP11.76□□□□□ -0.53
CLRN3-201ENST00000368671 ADGRD2Q7Z7M1 963 aa11.76□□□□□ -0.53
CLRN3-201ENST00000368671 SPNS2Q8IVW8 549 aa11.76□□□□□ -0.53
CLRN3-201ENST00000368671 CCDC60Q8IWA6 550 aaPredicted RBP11.76□□□□□ -0.53
CLRN3-201ENST00000368671 ADHFE1Q8IWW8 467 aa11.76□□□□□ -0.53
CLRN3-201ENST00000368671 CKAP2LQ8IYA6 745 aa11.76□□□□□ -0.53
CLRN3-201ENST00000368671 CRIPAKQ8N1N5 446 aa11.76□□□□□ -0.53
CLRN3-201ENST00000368671 NME8Q8N427 588 aa11.76□□□□□ -0.53
CLRN3-201ENST00000368671 KLHL23Q8NBE8 558 aa11.76□□□□□ -0.53
CLRN3-201ENST00000368671 ATP8B4Q8TF62 1192 aa11.76□□□□□ -0.53
CLRN3-201ENST00000368671 POF1BQ8WVV4 589 aa11.76□□□□□ -0.53
CLRN3-201ENST00000368671 P2RX5Q93086 422 aa11.76□□□□□ -0.53
CLRN3-201ENST00000368671 KCNK17Q96T54 332 aa11.76□□□□□ -0.53
CLRN3-201ENST00000368671 GLT8D2Q9H1C3 349 aa11.76□□□□□ -0.53
CLRN3-201ENST00000368671 FAM217BQ9NTX9 383 aaPredicted RBP11.76□□□□□ -0.53
CLRN3-201ENST00000368671 PRKAG3Q9UGI9 489 aa11.76□□□□□ -0.53
CLRN3-201ENST00000368671 KDM3AQ9Y4C1 1321 aa11.76□□□□□ -0.53
CLRN3-201ENST00000368671 FNDC1Q4ZHG4 1894 aaPredicted RBP11.75□□□□□ -0.53
CLRN3-201ENST00000368671 DCXO43602 365 aa11.75□□□□□ -0.53
CLRN3-201ENST00000368671 MGEA5O60502 916 aa11.75□□□□□ -0.53
CLRN3-201ENST00000368671 PPFIA3O75145 1194 aa11.75□□□□□ -0.53
CLRN3-201ENST00000368671 CDC45O75419 566 aa11.75□□□□□ -0.53
CLRN3-201ENST00000368671 RPS6KA5O75582 802 aa11.75□□□□□ -0.53
CLRN3-201ENST00000368671 CPA1P15085 419 aa11.75□□□□□ -0.53
CLRN3-201ENST00000368671 IRS1P35568 1242 aa11.75□□□□□ -0.53
CLRN3-201ENST00000368671 ADD1P35611 737 aaKnown RBP11.75□□□□□ -0.53
CLRN3-201ENST00000368671 SARSP49591 514 aaKnown RBP11.75□□□□□ -0.53
CLRN3-201ENST00000368671 NDUFV1P49821 464 aa11.75□□□□□ -0.53
CLRN3-201ENST00000368671 METAP2P50579 478 aaKnown RBP eCLIP11.75□□□□□ -0.53
CLRN3-201ENST00000368671 APOBRQ0VD83 1088 aa11.75□□□□□ -0.53
CLRN3-201ENST00000368671 CAMK1Q14012 370 aa11.75□□□□□ -0.53
CLRN3-201ENST00000368671 KRT32Q14532 448 aa11.75□□□□□ -0.53
CLRN3-201ENST00000368671 PFKFB3Q16875 520 aaPredicted RBP11.75□□□□□ -0.53
CLRN3-201ENST00000368671 SWSAP1Q6NVH7 229 aa11.75□□□□□ -0.53
CLRN3-201ENST00000368671 NIPA1Q7RTP0 329 aa11.75□□□□□ -0.53
CLRN3-201ENST00000368671 TEX2Q8IWB9 1127 aa11.75□□□□□ -0.53
CLRN3-201ENST00000368671 SPPL3Q8TCT6 385 aa11.75□□□□□ -0.53
CLRN3-201ENST00000368671 PPP2R3CQ969Q6 453 aa11.75□□□□□ -0.53
CLRN3-201ENST00000368671 ZNF577Q9BSK1 485 aa11.75□□□□□ -0.53
CLRN3-201ENST00000368671 CDHR5Q9HBB8 845 aa11.75□□□□□ -0.53
CLRN3-201ENST00000368671 ERVK-5Q9HDB9 667 aa11.75□□□□□ -0.53
CLRN3-201ENST00000368671 CD207Q9UJ71 328 aa11.75□□□□□ -0.53
CLRN3-201ENST00000368671 NOC2LQ9Y3T9 749 aaKnown RBP11.75□□□□□ -0.53
CLRN3-201ENST00000368671 PCDHB7Q9Y5E2 793 aa11.75□□□□□ -0.53
CLRN3-201ENST00000368671 COL1A2P08123 1366 aa11.75□□□□□ -0.53
CLRN3-201ENST00000368671 TTC28Q96AY4 2481 aa11.75□□□□□ -0.53
CLRN3-201ENST00000368671 IGLV3-22A0A075B6J6 115 aa11.74□□□□□ -0.53
CLRN3-201ENST00000368671 DENND3A2RUS2 1198 aa11.74□□□□□ -0.53
CLRN3-201ENST00000368671 TBKBP1A7MCY6 615 aa11.74□□□□□ -0.53
CLRN3-201ENST00000368671 IPO5O00410 1097 aaKnown RBP11.74□□□□□ -0.53
CLRN3-201ENST00000368671 ADAMTS3O15072 1205 aa11.74□□□□□ -0.53
CLRN3-201ENST00000368671 HMGB1P09429 215 aaKnown RBP11.74□□□□□ -0.53
CLRN3-201ENST00000368671 ADAM15Q13444 863 aa11.74□□□□□ -0.53
CLRN3-201ENST00000368671 SMAD4Q13485 552 aaKnown RBP11.74□□□□□ -0.53
CLRN3-201ENST00000368671 NBR1Q14596 966 aa11.74□□□□□ -0.53
CLRN3-201ENST00000368671 SMAD2Q15796 467 aaKnown RBP11.74□□□□□ -0.53
CLRN3-201ENST00000368671 TSGA10IPQ3SY00 556 aa11.74□□□□□ -0.53
CLRN3-201ENST00000368671 NAALADL2Q58DX5 795 aa11.74□□□□□ -0.53
CLRN3-201ENST00000368671 ZNF484Q5JVG2 852 aa11.74□□□□□ -0.53
CLRN3-201ENST00000368671 ODR4Q5SWX8 454 aa11.74□□□□□ -0.53
CLRN3-201ENST00000368671 DMRTA1Q5VZB9 504 aa11.74□□□□□ -0.53
CLRN3-201ENST00000368671 Q6ZUG5 572 aa11.74□□□□□ -0.53
CLRN3-201ENST00000368671 CENPQQ7L2Z9 268 aaPredicted RBP11.74□□□□□ -0.53
CLRN3-201ENST00000368671 RBM23Q86U06 439 aaKnown RBP11.74□□□□□ -0.53
CLRN3-201ENST00000368671 KIAA0319LQ8IZA0 1049 aa11.74□□□□□ -0.53
CLRN3-201ENST00000368671 TMEM40Q8WWA1 233 aa11.74□□□□□ -0.53
CLRN3-201ENST00000368671 OSMRQ99650 979 aa11.74□□□□□ -0.53
CLRN3-201ENST00000368671 ADAM2Q99965 735 aa11.74□□□□□ -0.53
CLRN3-201ENST00000368671 UPF3BQ9BZI7 483 aaKnown RBP11.74□□□□□ -0.53
CLRN3-201ENST00000368671 C6orf50Q9HD87 102 aa11.74□□□□□ -0.53
CLRN3-201ENST00000368671 TCEAL9Q9UHQ7 104 aa11.74□□□□□ -0.53
CLRN3-201ENST00000368671 PCDHGC5Q9Y5F6 944 aa11.74□□□□□ -0.53
CLRN3-201ENST00000368671 EVPLQ92817 2033 aa11.74□□□□□ -0.53
CLRN3-201ENST00000368671 CCDC196A0A1B0GTZ2 297 aa11.73□□□□□ -0.53
CLRN3-201ENST00000368671 GPR182O15218 404 aa11.73□□□□□ -0.53
CLRN3-201ENST00000368671 DHX15O43143 795 aaKnown RBP11.73□□□□□ -0.53
CLRN3-201ENST00000368671 VTNP04004 478 aa11.73□□□□□ -0.53
CLRN3-201ENST00000368671 CYP3A4P08684 503 aa11.73□□□□□ -0.53
CLRN3-201ENST00000368671 ATP4AP20648 1035 aa11.73□□□□□ -0.53
CLRN3-201ENST00000368671 NRIP1P48552 1158 aa11.73□□□□□ -0.53
CLRN3-201ENST00000368671 RCAN1P53805 252 aa11.73□□□□□ -0.53
CLRN3-201ENST00000368671 SETQ01105 290 aaPredicted RBP11.73□□□□□ -0.53
CLRN3-201ENST00000368671 KIZQ2M2Z5 673 aa11.73□□□□□ -0.53
CLRN3-201ENST00000368671 METTL13Q8N6R0 699 aa11.73□□□□□ -0.53
CLRN3-201ENST00000368671 MICAL1Q8TDZ2 1067 aa11.73□□□□□ -0.53
CLRN3-201ENST00000368671 BRF1Q92994 677 aa11.73□□□□□ -0.53
CLRN3-201ENST00000368671 JAKMIP1Q96N16 626 aaKnown RBP11.73□□□□□ -0.53
CLRN3-201ENST00000368671 POP1Q99575 1024 aaKnown RBP11.73□□□□□ -0.53
CLRN3-201ENST00000368671 RGS18Q9NS28 235 aa11.73□□□□□ -0.53
CLRN3-201ENST00000368671 C1orf112Q9NSG2 853 aa11.73□□□□□ -0.53
CLRN3-201ENST00000368671 HCSTQ9UBK5 93 aa11.73□□□□□ -0.53
CLRN3-201ENST00000368671 ST3GAL5Q9UNP4 418 aa11.73□□□□□ -0.53
CLRN3-201ENST00000368671 SAMM50Q9Y512 469 aa11.73□□□□□ -0.53
CLRN3-201ENST00000368671 MYH9P35579 1960 aaKnown RBP11.72□□□□□ -0.53
CLRN3-201ENST00000368671 ESYT2A0FGR8 921 aa11.72□□□□□ -0.53
CLRN3-201ENST00000368671 ZBTB42B2RXF5 422 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms