RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 SERINC5Q86VE9 423 aa15.48■□□□□ 0.07
TPM3-211ENST00000368531 FSIP1Q8NA03 581 aa15.48■□□□□ 0.07
TPM3-211ENST00000368531 DHX38Q92620 1227 aaKnown RBP15.48■□□□□ 0.07
TPM3-211ENST00000368531 DHX58Q96C10 678 aa15.48■□□□□ 0.07
TPM3-211ENST00000368531 CEP89Q96ST8 783 aa15.48■□□□□ 0.07
TPM3-211ENST00000368531 PPP1R16BQ96T49 567 aa15.48■□□□□ 0.07
TPM3-211ENST00000368531 POLD4Q9HCU8 107 aa15.48■□□□□ 0.07
TPM3-211ENST00000368531 PDLIM7Q9NR12 457 aa15.48■□□□□ 0.07
TPM3-211ENST00000368531 ZMYND8Q9ULU4 1186 aaPredicted RBP15.48■□□□□ 0.07
TPM3-211ENST00000368531 PCDHA2Q9Y5H9 948 aa15.48■□□□□ 0.07
TPM3-211ENST00000368531 TRIM43BA6NCK2 446 aa15.47■□□□□ 0.07
TPM3-211ENST00000368531 POLR2DO15514 142 aaKnown RBP15.47■□□□□ 0.07
TPM3-211ENST00000368531 MAFO75444 373 aaPredicted RBP15.47■□□□□ 0.07
TPM3-211ENST00000368531 CTSHP09668 335 aa15.47■□□□□ 0.07
TPM3-211ENST00000368531 CYP2C18P33260 490 aa15.47■□□□□ 0.07
TPM3-211ENST00000368531 DRP2Q13474 957 aa15.47■□□□□ 0.07
TPM3-211ENST00000368531 EMC2Q15006 297 aa15.47■□□□□ 0.07
TPM3-211ENST00000368531 CCDC73Q6ZRK6 1079 aa15.47■□□□□ 0.07
TPM3-211ENST00000368531 RETREG2Q8NC44 543 aa15.47■□□□□ 0.07
TPM3-211ENST00000368531 SLC7A3Q8WY07 619 aa15.47■□□□□ 0.07
TPM3-211ENST00000368531 RAD54LQ92698 747 aa15.47■□□□□ 0.07
TPM3-211ENST00000368531 TMEM143Q96AN5 459 aa15.47■□□□□ 0.07
TPM3-211ENST00000368531 TRIM43Q96BQ3 446 aaPredicted RBP15.47■□□□□ 0.07
TPM3-211ENST00000368531 ZNF668Q96K58 619 aaPredicted RBP15.47■□□□□ 0.07
TPM3-211ENST00000368531 HIPK3Q9H422 1215 aa15.47■□□□□ 0.07
TPM3-211ENST00000368531 DHX33Q9H6R0 707 aaKnown RBP15.47■□□□□ 0.07
TPM3-211ENST00000368531 BLOC1S4Q9NUP1 217 aa15.47■□□□□ 0.07
TPM3-211ENST00000368531 PRKAG2Q9UGJ0 569 aa15.47■□□□□ 0.07
TPM3-211ENST00000368531 KCNH3Q9ULD8 1083 aa15.47■□□□□ 0.07
TPM3-211ENST00000368531 AKT3Q9Y243 479 aa15.47■□□□□ 0.07
TPM3-211ENST00000368531 UMODL1Q5DID0 1318 aa15.46■□□□□ 0.07
TPM3-211ENST00000368531 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.46■□□□□ 0.07
TPM3-211ENST00000368531 SMIM35A0A1B0GVV1 85 aa15.46■□□□□ 0.07
TPM3-211ENST00000368531 GADD45BO75293 160 aaPredicted RBP15.46■□□□□ 0.07
TPM3-211ENST00000368531 PRPF40AO75400 957 aaKnown RBP15.46■□□□□ 0.07
TPM3-211ENST00000368531 VTNP04004 478 aa15.46■□□□□ 0.07
TPM3-211ENST00000368531 RAG1P15918 1043 aa15.46■□□□□ 0.07
TPM3-211ENST00000368531 PFKFB1P16118 471 aa15.46■□□□□ 0.07
TPM3-211ENST00000368531 TMOD1P28289 359 aa15.46■□□□□ 0.07
TPM3-211ENST00000368531 RFC5P40937 340 aa15.46■□□□□ 0.07
TPM3-211ENST00000368531 RGS19P49795 217 aa15.46■□□□□ 0.07
TPM3-211ENST00000368531 RAD51AP2Q09MP3 1159 aa15.46■□□□□ 0.07
TPM3-211ENST00000368531 BFSP2Q13515 415 aa15.46■□□□□ 0.07
TPM3-211ENST00000368531 TAF2Q6P1X5 1199 aa15.46■□□□□ 0.07
TPM3-211ENST00000368531 KIAA0319LQ8IZA0 1049 aa15.46■□□□□ 0.07
TPM3-211ENST00000368531 SYT2Q8N9I0 419 aaPredicted RBP15.46■□□□□ 0.07
TPM3-211ENST00000368531 MRPS27Q92552 414 aaKnown RBP15.46■□□□□ 0.07
TPM3-211ENST00000368531 LARP4BQ92615 738 aaKnown RBP15.46■□□□□ 0.07
TPM3-211ENST00000368531 STAMQ92783 540 aa15.46■□□□□ 0.07
TPM3-211ENST00000368531 GBP4Q96PP9 640 aa15.46■□□□□ 0.07
TPM3-211ENST00000368531 MTRQ99707 1265 aa15.46■□□□□ 0.07
TPM3-211ENST00000368531 RUSC1Q9BVN2 902 aa15.46■□□□□ 0.07
TPM3-211ENST00000368531 GOLPH3LQ9H4A5 285 aa15.46■□□□□ 0.07
TPM3-211ENST00000368531 ATP6V0A4Q9HBG4 840 aa15.46■□□□□ 0.07
TPM3-211ENST00000368531 TBX21Q9UL17 535 aa15.46■□□□□ 0.07
TPM3-211ENST00000368531 GINS2Q9Y248 185 aa15.46■□□□□ 0.07
TPM3-211ENST00000368531 MYH11P35749 1972 aa15.45■□□□□ 0.06
TPM3-211ENST00000368531 SCN5AQ14524 2016 aa15.45■□□□□ 0.06
TPM3-211ENST00000368531 NPHP3-ACAD11A0A0J9YXS1 232 aa15.45■□□□□ 0.06
TPM3-211ENST00000368531 A0A1W2PQ27 194 aa15.45■□□□□ 0.06
TPM3-211ENST00000368531 A0A1W2PQ64 194 aa15.45■□□□□ 0.06
TPM3-211ENST00000368531 A0A1W2PQD8 194 aa15.45■□□□□ 0.06
TPM3-211ENST00000368531 DGAT1O75907 488 aa15.45■□□□□ 0.06
TPM3-211ENST00000368531 CKBP12277 381 aa15.45■□□□□ 0.06
TPM3-211ENST00000368531 DNM2P50570 870 aa15.45■□□□□ 0.06
TPM3-211ENST00000368531 NDUFA8P51970 172 aa15.45■□□□□ 0.06
TPM3-211ENST00000368531 SLC12A3P55017 1021 aa15.45■□□□□ 0.06
TPM3-211ENST00000368531 CCL23P55773 120 aa15.45■□□□□ 0.06
TPM3-211ENST00000368531 MKRN4PQ13434 485 aaPredicted RBP15.45■□□□□ 0.06
TPM3-211ENST00000368531 TRIM71Q2Q1W2 868 aaKnown RBP15.45■□□□□ 0.06
TPM3-211ENST00000368531 NAALADL2Q58DX5 795 aa15.45■□□□□ 0.06
TPM3-211ENST00000368531 ZNF618Q5T7W0 954 aa15.45■□□□□ 0.06
TPM3-211ENST00000368531 FAM102BQ5T8I3 360 aa15.45■□□□□ 0.06
TPM3-211ENST00000368531 RINT1Q6NUQ1 792 aa15.45■□□□□ 0.06
TPM3-211ENST00000368531 RSPH3Q86UC2 560 aa15.45■□□□□ 0.06
TPM3-211ENST00000368531 GPBP1Q86WP2 473 aa15.45■□□□□ 0.06
TPM3-211ENST00000368531 CCDC155Q8N6L0 562 aa15.45■□□□□ 0.06
TPM3-211ENST00000368531 MAP7D2Q96T17 732 aa15.45■□□□□ 0.06
TPM3-211ENST00000368531 JPH2Q9BR39 696 aaPredicted RBP15.45■□□□□ 0.06
TPM3-211ENST00000368531 NOC4LQ9BVI4 516 aaKnown RBP15.45■□□□□ 0.06
TPM3-211ENST00000368531 GPRC5CQ9NQ84 441 aa15.45■□□□□ 0.06
TPM3-211ENST00000368531 XPNPEP1Q9NQW7 623 aa15.45■□□□□ 0.06
TPM3-211ENST00000368531 SUCLA2Q9P2R7 463 aaPredicted RBP15.45■□□□□ 0.06
TPM3-211ENST00000368531 STK17AQ9UEE5 414 aa15.45■□□□□ 0.06
TPM3-211ENST00000368531 PPME1Q9Y570 386 aa15.45■□□□□ 0.06
TPM3-211ENST00000368531 NR2E3Q9Y5X4 410 aa15.45■□□□□ 0.06
TPM3-211ENST00000368531 IGKV6-21A0A0C4DH24 114 aa15.44■□□□□ 0.06
TPM3-211ENST00000368531 KIAA0355O15063 1070 aa15.44■□□□□ 0.06
TPM3-211ENST00000368531 KRT18P05783 430 aaKnown RBP15.44■□□□□ 0.06
TPM3-211ENST00000368531 CYP11B2P19099 503 aa15.44■□□□□ 0.06
TPM3-211ENST00000368531 ITGB8P26012 769 aa15.44■□□□□ 0.06
TPM3-211ENST00000368531 SYKP43405 635 aa15.44■□□□□ 0.06
TPM3-211ENST00000368531 MLLT1Q03111 559 aaPredicted RBP15.44■□□□□ 0.06
TPM3-211ENST00000368531 SV2BQ7L1I2 683 aa15.44■□□□□ 0.06
TPM3-211ENST00000368531 RHPN2Q8IUC4 686 aa15.44■□□□□ 0.06
TPM3-211ENST00000368531 KSR1Q8IVT5 923 aa15.44■□□□□ 0.06
TPM3-211ENST00000368531 EXOC8Q8IYI6 725 aa15.44■□□□□ 0.06
TPM3-211ENST00000368531 KCTD17Q8N5Z5 321 aa15.44■□□□□ 0.06
TPM3-211ENST00000368531 IQUBQ8NA54 791 aa15.44■□□□□ 0.06
TPM3-211ENST00000368531 CAGE1Q8TC20 777 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms