RNA–Protein interactions for RNA: ENST00000368450.5

SHC1-204, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-204ENST00000368450 BARHL2Q9NY43 387 aa16.24■□□□□ 0.19
SHC1-204ENST00000368450 NKX1-2Q9UD57 310 aaPredicted RBP16.24■□□□□ 0.19
SHC1-204ENST00000368450 PCDH11XQ9BZA7 1347 aa16.24■□□□□ 0.19
SHC1-204ENST00000368450 PCDH11YQ9BZA8 1340 aa16.24■□□□□ 0.19
SHC1-204ENST00000368450 BAZ2AQ9UIF9 1905 aaKnown RBP16.24■□□□□ 0.19
SHC1-204ENST00000368450 TNS3Q68CZ2 1445 aa16.24■□□□□ 0.19
SHC1-204ENST00000368450 GFPT2O94808 682 aa16.24■□□□□ 0.19
SHC1-204ENST00000368450 USP17L8P0C7I0 530 aa16.24■□□□□ 0.19
SHC1-204ENST00000368450 BNIP1Q12981 228 aa16.24■□□□□ 0.19
SHC1-204ENST00000368450 GJB7Q6PEY0 223 aa16.24■□□□□ 0.19
SHC1-204ENST00000368450 NT5DC3Q86UY8 548 aa16.24■□□□□ 0.19
SHC1-204ENST00000368450 JAMLQ86YT9 394 aa16.24■□□□□ 0.19
SHC1-204ENST00000368450 ARHGEF2Q92974 986 aaKnown RBP16.24■□□□□ 0.19
SHC1-204ENST00000368450 UBA5Q9GZZ9 404 aa16.24■□□□□ 0.19
SHC1-204ENST00000368450 RASAL2Q9UJF2 1139 aa16.24■□□□□ 0.19
SHC1-204ENST00000368450 ABCB11O95342 1321 aa16.23■□□□□ 0.19
SHC1-204ENST00000368450 ALADP13716 330 aa16.23■□□□□ 0.19
SHC1-204ENST00000368450 UCHL3P15374 230 aa16.23■□□□□ 0.19
SHC1-204ENST00000368450 RAB27AP51159 221 aa16.23■□□□□ 0.19
SHC1-204ENST00000368450 C18orf8Q96DM3 657 aa16.23■□□□□ 0.19
SHC1-204ENST00000368450 CRNKL1Q9BZJ0 848 aaKnown RBP16.23■□□□□ 0.19
SHC1-204ENST00000368450 EPB41L4BQ9H329 900 aa16.23■□□□□ 0.19
SHC1-204ENST00000368450 TBK1Q9UHD2 729 aa16.23■□□□□ 0.19
SHC1-204ENST00000368450 PPP1R9AQ9ULJ8 1098 aa16.23■□□□□ 0.19
SHC1-204ENST00000368450 ARL2BPQ9Y2Y0 163 aa16.23■□□□□ 0.19
SHC1-204ENST00000368450 NPHP3-ACAD11A0A0J9YXS1 232 aa16.23■□□□□ 0.19
SHC1-204ENST00000368450 KLRF2D3W0D1 207 aa16.23■□□□□ 0.19
SHC1-204ENST00000368450 CETN3O15182 167 aa16.23■□□□□ 0.19
SHC1-204ENST00000368450 GNAQP50148 359 aa16.23■□□□□ 0.19
SHC1-204ENST00000368450 GALCP54803 685 aa16.23■□□□□ 0.19
SHC1-204ENST00000368450 EXOC3L4Q17RC7 722 aa16.23■□□□□ 0.19
SHC1-204ENST00000368450 TMEM154Q6P9G4 183 aa16.23■□□□□ 0.19
SHC1-204ENST00000368450 INTS8Q75QN2 995 aaKnown RBP16.23■□□□□ 0.19
SHC1-204ENST00000368450 IRF2BP2Q7Z5L9 587 aa16.23■□□□□ 0.19
SHC1-204ENST00000368450 RAD54LQ92698 747 aa16.23■□□□□ 0.19
SHC1-204ENST00000368450 RMDN2Q96LZ7 410 aa16.23■□□□□ 0.19
SHC1-204ENST00000368450 TMEM237Q96Q45 408 aa16.23■□□□□ 0.19
SHC1-204ENST00000368450 DCP1AQ9NPI6 582 aaPredicted RBP16.23■□□□□ 0.19
SHC1-204ENST00000368450 SUCLA2Q9P2R7 463 aaPredicted RBP16.23■□□□□ 0.19
SHC1-204ENST00000368450 LGR5O75473 907 aa16.22■□□□□ 0.19
SHC1-204ENST00000368450 NR2F2P24468 414 aa16.22■□□□□ 0.19
SHC1-204ENST00000368450 STX2P32856 288 aa16.22■□□□□ 0.19
SHC1-204ENST00000368450 C10orf76Q5T2E6 689 aa16.22■□□□□ 0.19
SHC1-204ENST00000368450 PROM2Q8N271 834 aa16.22■□□□□ 0.19
SHC1-204ENST00000368450 STK17AQ9UEE5 414 aa16.22■□□□□ 0.19
SHC1-204ENST00000368450 HDAC9Q9UKV0 1011 aa16.22■□□□□ 0.19
SHC1-204ENST00000368450 TDP2O95551 362 aa16.22■□□□□ 0.19
SHC1-204ENST00000368450 NUDT17P0C025 328 aa16.22■□□□□ 0.19
SHC1-204ENST00000368450 TSPY3P0CV98 308 aa16.22■□□□□ 0.19
SHC1-204ENST00000368450 TSPY8P0CW00 308 aa16.22■□□□□ 0.19
SHC1-204ENST00000368450 RPS6KA3P51812 740 aa16.22■□□□□ 0.19
SHC1-204ENST00000368450 TRAF1Q13077 416 aa16.22■□□□□ 0.19
SHC1-204ENST00000368450 ZNF449Q6P9G9 518 aa16.22■□□□□ 0.19
SHC1-204ENST00000368450 EXOC3L1Q86VI1 746 aa16.22■□□□□ 0.19
SHC1-204ENST00000368450 RAB34Q9BZG1 259 aa16.22■□□□□ 0.19
SHC1-204ENST00000368450 ARHGEF3Q9NR81 526 aa16.22■□□□□ 0.19
SHC1-204ENST00000368450 FER1L4A9Z1Z3 1794 aa16.22■□□□□ 0.19
SHC1-204ENST00000368450 KIF1AQ12756 1690 aa16.22■□□□□ 0.19
SHC1-204ENST00000368450 M0R2N6 131 aa16.22■□□□□ 0.19
SHC1-204ENST00000368450 AHCYL1O43865 530 aa16.22■□□□□ 0.19
SHC1-204ENST00000368450 FERP16591 822 aa16.22■□□□□ 0.19
SHC1-204ENST00000368450 TUBP50607 506 aa16.22■□□□□ 0.19
SHC1-204ENST00000368450 DUPD1Q68J44 220 aa16.22■□□□□ 0.19
SHC1-204ENST00000368450 COL23A1Q86Y22 540 aaPredicted RBP16.22■□□□□ 0.19
SHC1-204ENST00000368450 TRIM59Q8IWR1 403 aa16.22■□□□□ 0.19
SHC1-204ENST00000368450 NUDCD1Q96RS6 583 aa16.22■□□□□ 0.19
SHC1-204ENST00000368450 DLGAP2Q9P1A6 1054 aa16.22■□□□□ 0.19
SHC1-204ENST00000368450 A6NHS1 94 aa16.21■□□□□ 0.19
SHC1-204ENST00000368450 GH1P01241 217 aa16.21■□□□□ 0.19
SHC1-204ENST00000368450 GNA11P29992 359 aa16.21■□□□□ 0.19
SHC1-204ENST00000368450 AUHQ13825 339 aaKnown RBP16.21■□□□□ 0.19
SHC1-204ENST00000368450 ANO7Q6IWH7 933 aa16.21■□□□□ 0.19
SHC1-204ENST00000368450 SEPT14Q6ZU15 432 aa16.21■□□□□ 0.19
SHC1-204ENST00000368450 SLC35G2Q8TBE7 412 aa16.21■□□□□ 0.19
SHC1-204ENST00000368450 RAB3IPQ96QF0 476 aaPredicted RBP16.21■□□□□ 0.19
SHC1-204ENST00000368450 TGS1Q96RS0 853 aaKnown RBP16.21■□□□□ 0.19
SHC1-204ENST00000368450 GANQ9H2C0 597 aa16.21■□□□□ 0.19
SHC1-204ENST00000368450 ZDHHC18Q9NUE0 388 aa16.21■□□□□ 0.19
SHC1-204ENST00000368450 SEC63Q9UGP8 760 aaKnown RBP16.21■□□□□ 0.19
SHC1-204ENST00000368450 ZBTB1Q9Y2K1 713 aa16.21■□□□□ 0.19
SHC1-204ENST00000368450 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.21■□□□□ 0.19
SHC1-204ENST00000368450 USP54Q70EL1 1684 aa16.21■□□□□ 0.19
SHC1-204ENST00000368450 FESP07332 822 aa16.21■□□□□ 0.19
SHC1-204ENST00000368450 PTENP60484 403 aa16.21■□□□□ 0.19
SHC1-204ENST00000368450 KLRC3Q07444 240 aa16.21■□□□□ 0.19
SHC1-204ENST00000368450 SLC35G1Q2M3R5 365 aa16.21■□□□□ 0.19
SHC1-204ENST00000368450 MUM1Q2TAK8 710 aa16.21■□□□□ 0.19
SHC1-204ENST00000368450 GLYCTKQ8IVS8 523 aa16.21■□□□□ 0.19
SHC1-204ENST00000368450 CCDC105Q8IYK2 499 aa16.21■□□□□ 0.19
SHC1-204ENST00000368450 CNBD1Q8NA66 436 aa16.21■□□□□ 0.19
SHC1-204ENST00000368450 CTNNBL1Q8WYA6 563 aaPredicted RBP16.21■□□□□ 0.19
SHC1-204ENST00000368450 MAD2L2Q9UI95 211 aa16.21■□□□□ 0.19
SHC1-204ENST00000368450 C2CD2Q9Y426 696 aa16.21■□□□□ 0.19
SHC1-204ENST00000368450 TARSP26639 723 aaKnown RBP16.2■□□□□ 0.18
SHC1-204ENST00000368450 RPL21P46778 160 aaKnown RBP16.2■□□□□ 0.18
SHC1-204ENST00000368450 TNNI2P48788 182 aa16.2■□□□□ 0.18
SHC1-204ENST00000368450 TNIP1Q15025 636 aa16.2■□□□□ 0.18
SHC1-204ENST00000368450 CAVIN4Q5BKX8 364 aa16.2■□□□□ 0.18
SHC1-204ENST00000368450 ZNF444Q8N0Y2 327 aaPredicted RBP16.2■□□□□ 0.18
SHC1-204ENST00000368450 REXO1Q8N1G1 1221 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms