RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 SUPT6HQ7KZ85 1726 aaKnown RBP4.02□□□□□ -1.77
SYNE1-207ENST00000367255 ERP29P30040 261 aaKnown RBP4.02□□□□□ -1.77
SYNE1-207ENST00000367255 SH3GL1Q99961 368 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 WDR11Q9BZH6 1224 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 KIAA1586Q9HCI6 787 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 CABP1Q9NZU7 370 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 A0A1W2PP64 1363 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 SYNMO15061 1565 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 CIAO1O76071 339 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 NLRP11P59045 1033 aaKnown RBP4.02□□□□□ -1.77
SYNE1-207ENST00000367255 EPN3Q9H201 632 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 PNPLA7Q6ZV29 1317 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 C15orf38-AP3S2A0A0A6YYH1 394 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 NFIAQ12857 509 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 KIAA1755Q5JYT7 1200 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 C11orf88Q6PI97 169 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 ARPINQ7Z6K5 226 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 SMYD4Q8IYR2 804 aaPredicted RBP4.02□□□□□ -1.77
SYNE1-207ENST00000367255 EFHBQ8N7U6 833 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 DCLRE1BQ9H816 532 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 PADI4Q9UM07 663 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 JAG2Q9Y219 1238 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 ZNF233A6NK53 670 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 SLFN14P0C7P3 912 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 ARID5AQ03989 594 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 WWP1Q9H0M0 922 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 ZNF212Q9UDV6 495 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 KCNH3Q9ULD8 1083 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 KDM6AO15550 1401 aaPredicted RBP4.02□□□□□ -1.77
SYNE1-207ENST00000367255 CARSP49589 748 aaKnown RBP4.02□□□□□ -1.77
SYNE1-207ENST00000367255 COG7P83436 770 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 GINM1Q9NU53 330 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 BTBD19C9JJ37 291 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 RIC3Q7Z5B4 369 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 VPS18Q9P253 973 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 ASAP2O43150 1006 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 FDX1P10109 184 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 CAPZA1P52907 286 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 TXNL4AP83876 142 aaKnown RBP4.02□□□□□ -1.77
SYNE1-207ENST00000367255 STILQ15468 1287 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 MIGA2Q7L4E1 593 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 NOSTRINQ8IVI9 506 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 CHMP6Q96FZ7 201 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 SLC39A3Q9BRY0 314 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 A0A0A6YYK5 440 aaPredicted RBP4.02□□□□□ -1.77
SYNE1-207ENST00000367255 LBRQ14739 615 aaKnown RBP4.02□□□□□ -1.77
SYNE1-207ENST00000367255 SGSM1Q2NKQ1 1148 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 CDHR1Q96JP9 859 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 DDX23Q9BUQ8 820 aaKnown RBP4.02□□□□□ -1.77
SYNE1-207ENST00000367255 TOMM20Q15388 145 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 POF1BQ8WVV4 589 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 EIF4G3O43432 1585 aaKnown RBP4.02□□□□□ -1.77
SYNE1-207ENST00000367255 MAGI2Q86UL8 1455 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 TSC22D2O75157 780 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 DDAH1O94760 285 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 TGM6O95932 706 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 CSTF3Q12996 717 aaKnown RBP4.02□□□□□ -1.77
SYNE1-207ENST00000367255 PLD1Q13393 1074 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 CD302Q8IX05 232 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 APPBP2Q92624 585 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 STMN3Q9NZ72 180 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 COL15A1P39059 1388 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 SLC16A3O15427 465 aaKnown RBP4.02□□□□□ -1.77
SYNE1-207ENST00000367255 KRT25Q7Z3Z0 450 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 BTBD9Q96Q07 612 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 SELENOSQ9BQE4 189 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 C12orf65Q9H3J6 166 aaKnown RBP4.02□□□□□ -1.77
SYNE1-207ENST00000367255 TULP2O00295 520 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 IQCB1Q15051 598 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 FANCEQ9HB96 536 aa4.02□□□□□ -1.77
SYNE1-207ENST00000367255 KPNA4O00629 521 aaPredicted RBP4.01□□□□□ -1.77
SYNE1-207ENST00000367255 ZNF658Q5TYW1 1059 aaPredicted RBP4.01□□□□□ -1.77
SYNE1-207ENST00000367255 KCNK16Q96T55 309 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 SAR1AQ9NR31 198 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 STARD13Q9Y3M8 1113 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 ERVK-7P63135 1459 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 UGP2Q16851 508 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 VPS37DQ86XT2 251 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 ZNF354CQ86Y25 554 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 C7orf57Q8NEG2 295 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 MAML1Q92585 1016 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 GLS2Q9UI32 602 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 SUFUQ9UMX1 484 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 ERCC2P18074 760 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 MAPK9P45984 424 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 CCDC125Q86Z20 511 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 HERC2P3Q9BVR0 1158 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 PARVAQ9NVD7 372 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 TMEM63CQ9P1W3 806 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 DAPK2Q9UIK4 370 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 PYCARDQ9ULZ3 195 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 RXRAP19793 462 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 AKR1D1P51857 326 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 SRLQ86TD4 932 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 BTNL10A8MVZ5 291 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 SSRP1Q08945 709 aaKnown RBP4.01□□□□□ -1.77
SYNE1-207ENST00000367255 RPS6KA1Q15418 735 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 C6orf50Q9HD87 102 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 RCOR1Q9UKL0 485 aa4.01□□□□□ -1.77
SYNE1-207ENST00000367255 ATP11BQ9Y2G3 1177 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms