RNA–Protein interactions for RNA: ENST00000367186.7

SCAF8-202, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-202ENST00000367186 FAM160B1Q5W0V3 765 aa11.23□□□□□ -0.61
SCAF8-202ENST00000367186 WDR75Q8IWA0 830 aaKnown RBP11.23□□□□□ -0.61
SCAF8-202ENST00000367186 TRIM55Q9BYV6 548 aa11.23□□□□□ -0.61
SCAF8-202ENST00000367186 PTPRTO14522 1441 aa11.22□□□□□ -0.61
SCAF8-202ENST00000367186 DUOX2Q9NRD8 1548 aa11.22□□□□□ -0.61
SCAF8-202ENST00000367186 PPRC1Q5VV67 1664 aaKnown RBP11.22□□□□□ -0.61
SCAF8-202ENST00000367186 KIDINS220Q9ULH0 1771 aa11.22□□□□□ -0.61
SCAF8-202ENST00000367186 HMGB1P1B2RPK0 211 aaPredicted RBP11.22□□□□□ -0.61
SCAF8-202ENST00000367186 NCLNQ969V3 563 aa11.22□□□□□ -0.61
SCAF8-202ENST00000367186 DRC3Q9H069 523 aa11.22□□□□□ -0.61
SCAF8-202ENST00000367186 UPF3AQ9H1J1 476 aaKnown RBP11.22□□□□□ -0.61
SCAF8-202ENST00000367186 SUGT1Q9Y2Z0 365 aa11.22□□□□□ -0.61
SCAF8-202ENST00000367186 KRT37O76014 449 aa11.22□□□□□ -0.61
SCAF8-202ENST00000367186 SRGAP2BP0DMP2 458 aa11.22□□□□□ -0.61
SCAF8-202ENST00000367186 PTPREP23469 700 aa11.22□□□□□ -0.61
SCAF8-202ENST00000367186 PRCPP42785 496 aa11.22□□□□□ -0.61
SCAF8-202ENST00000367186 C1orf146Q5VVC0 180 aa11.22□□□□□ -0.61
SCAF8-202ENST00000367186 MMS22LQ6ZRQ5 1243 aa11.22□□□□□ -0.61
SCAF8-202ENST00000367186 CRLF3Q8IUI8 442 aa11.22□□□□□ -0.61
SCAF8-202ENST00000367186 INO80Q9ULG1 1556 aaPredicted RBP11.22□□□□□ -0.61
SCAF8-202ENST00000367186 TTC26A0AVF1 554 aa11.22□□□□□ -0.61
SCAF8-202ENST00000367186 DIAPH2O60879 1101 aa11.22□□□□□ -0.61
SCAF8-202ENST00000367186 SH3BGRP55822 239 aaPredicted RBP11.22□□□□□ -0.61
SCAF8-202ENST00000367186 TFDP1Q14186 410 aa11.22□□□□□ -0.61
SCAF8-202ENST00000367186 SPARCL1Q14515 664 aa11.22□□□□□ -0.61
SCAF8-202ENST00000367186 ICE2Q659A1 982 aa11.22□□□□□ -0.61
SCAF8-202ENST00000367186 ATG16L1Q676U5 607 aa11.22□□□□□ -0.61
SCAF8-202ENST00000367186 MCTP2Q6DN12 878 aa11.22□□□□□ -0.61
SCAF8-202ENST00000367186 POLR3CQ9BUI4 534 aaPredicted RBP11.22□□□□□ -0.61
SCAF8-202ENST00000367186 THEGQ9P2T0 379 aa11.22□□□□□ -0.61
SCAF8-202ENST00000367186 CAPN11Q9UMQ6 739 aa11.22□□□□□ -0.61
SCAF8-202ENST00000367186 ZMYM4Q5VZL5 1548 aa11.22□□□□□ -0.61
SCAF8-202ENST00000367186 COL17A1Q9UMD9 1497 aaPredicted RBP11.22□□□□□ -0.61
SCAF8-202ENST00000367186 CFAP69A5D8W1 941 aa11.21□□□□□ -0.61
SCAF8-202ENST00000367186 H3BRJ5 948 aa11.21□□□□□ -0.61
SCAF8-202ENST00000367186 TRIM37O94972 964 aa11.21□□□□□ -0.61
SCAF8-202ENST00000367186 TRIM59Q8IWR1 403 aa11.21□□□□□ -0.61
SCAF8-202ENST00000367186 TRIM11Q96F44 468 aa11.21□□□□□ -0.61
SCAF8-202ENST00000367186 ATXN7L3BQ96GX2 97 aa11.21□□□□□ -0.61
SCAF8-202ENST00000367186 MSTO1Q9BUK6 570 aa11.21□□□□□ -0.61
SCAF8-202ENST00000367186 ACTR5Q9H9F9 607 aaPredicted RBP11.21□□□□□ -0.61
SCAF8-202ENST00000367186 FAM8A1Q9UBU6 413 aa11.21□□□□□ -0.61
SCAF8-202ENST00000367186 CHUKO15111 745 aa11.21□□□□□ -0.61
SCAF8-202ENST00000367186 GCFC2P16383 781 aaKnown RBP11.21□□□□□ -0.61
SCAF8-202ENST00000367186 MAGEA9P43362 315 aa11.21□□□□□ -0.61
SCAF8-202ENST00000367186 STAT2P52630 851 aa11.21□□□□□ -0.61
SCAF8-202ENST00000367186 NSUN2Q08J23 767 aaKnown RBP eCLIP11.21□□□□□ -0.61
SCAF8-202ENST00000367186 CDC37Q16543 378 aaPredicted RBP11.21□□□□□ -0.61
SCAF8-202ENST00000367186 LRRC36Q1X8D7 754 aa11.21□□□□□ -0.61
SCAF8-202ENST00000367186 TMEM270Q6UE05 265 aa11.21□□□□□ -0.61
SCAF8-202ENST00000367186 SFR1Q86XK3 245 aa11.21□□□□□ -0.61
SCAF8-202ENST00000367186 RNF135Q8IUD6 432 aa11.21□□□□□ -0.61
SCAF8-202ENST00000367186 VPS39Q96JC1 886 aa11.21□□□□□ -0.61
SCAF8-202ENST00000367186 GOLPH3LQ9H4A5 285 aa11.21□□□□□ -0.61
SCAF8-202ENST00000367186 SLITRK6Q9H5Y7 841 aa11.21□□□□□ -0.61
SCAF8-202ENST00000367186 TMEM206Q9H813 350 aa11.21□□□□□ -0.61
SCAF8-202ENST00000367186 SARS2Q9NP81 518 aaKnown RBP11.21□□□□□ -0.61
SCAF8-202ENST00000367186 ABHD10Q9NUJ1 306 aa11.21□□□□□ -0.61
SCAF8-202ENST00000367186 SLC5A4Q9NY91 659 aa11.21□□□□□ -0.61
SCAF8-202ENST00000367186 POLIQ9UNA4 740 aa11.21□□□□□ -0.61
SCAF8-202ENST00000367186 ZNF233A6NK53 670 aa11.21□□□□□ -0.61
SCAF8-202ENST00000367186 GOLGA8RI6L899 631 aa11.21□□□□□ -0.61
SCAF8-202ENST00000367186 SPAG7O75391 227 aa11.21□□□□□ -0.61
SCAF8-202ENST00000367186 PRDX5P30044 214 aa11.21□□□□□ -0.61
SCAF8-202ENST00000367186 SOX11P35716 441 aa11.21□□□□□ -0.61
SCAF8-202ENST00000367186 GUCY1A3Q02108 690 aa11.21□□□□□ -0.61
SCAF8-202ENST00000367186 CCDC85BQ15834 202 aaPredicted RBP11.21□□□□□ -0.61
SCAF8-202ENST00000367186 EPHA10Q5JZY3 1008 aa11.21□□□□□ -0.61
SCAF8-202ENST00000367186 CC2D2BQ6DHV5 1058 aa11.21□□□□□ -0.61
SCAF8-202ENST00000367186 ARMC9Q7Z3E5 817 aa11.21□□□□□ -0.61
SCAF8-202ENST00000367186 SH2D3CQ8N5H7 860 aa11.21□□□□□ -0.61
SCAF8-202ENST00000367186 PSPC1Q8WXF1 523 aaKnown RBP11.21□□□□□ -0.61
SCAF8-202ENST00000367186 ING2Q9H160 280 aa11.21□□□□□ -0.61
SCAF8-202ENST00000367186 THAP9Q9H5L6 903 aa11.21□□□□□ -0.61
SCAF8-202ENST00000367186 GTSE1Q9NYZ3 720 aa11.21□□□□□ -0.61
SCAF8-202ENST00000367186 PLEKHG3A1L390 1219 aa11.21□□□□□ -0.62
SCAF8-202ENST00000367186 LTKP29376 864 aa11.21□□□□□ -0.62
SCAF8-202ENST00000367186 MECOMQ03112 1051 aa11.21□□□□□ -0.62
SCAF8-202ENST00000367186 RABGAP1LQ5R372 815 aa11.21□□□□□ -0.62
SCAF8-202ENST00000367186 RNF139Q8WU17 664 aa11.21□□□□□ -0.62
SCAF8-202ENST00000367186 FAM161BQ96MY7 647 aa11.21□□□□□ -0.62
SCAF8-202ENST00000367186 EDEM3Q9BZQ6 932 aa11.21□□□□□ -0.62
SCAF8-202ENST00000367186 NBPF3Q9H094 633 aa11.21□□□□□ -0.62
SCAF8-202ENST00000367186 KLHL8Q9P2G9 620 aaPredicted RBP11.21□□□□□ -0.62
SCAF8-202ENST00000367186 YEATS2Q9ULM3 1422 aa11.21□□□□□ -0.62
SCAF8-202ENST00000367186 PRPF3O43395 683 aaKnown RBP11.2□□□□□ -0.62
SCAF8-202ENST00000367186 EIF3BP55884 814 aaKnown RBP11.2□□□□□ -0.62
SCAF8-202ENST00000367186 ADCY2Q08462 1091 aa11.2□□□□□ -0.62
SCAF8-202ENST00000367186 KCNH2Q12809 1159 aa11.2□□□□□ -0.62
SCAF8-202ENST00000367186 CAPRIN1Q14444 709 aaKnown RBP11.2□□□□□ -0.62
SCAF8-202ENST00000367186 GLE1Q53GS7 698 aaKnown RBP11.2□□□□□ -0.62
SCAF8-202ENST00000367186 RIN2Q8WYP3 895 aaPredicted RBP11.2□□□□□ -0.62
SCAF8-202ENST00000367186 CEP19Q96LK0 163 aa11.2□□□□□ -0.62
SCAF8-202ENST00000367186 PPP1R36Q96LQ0 422 aa11.2□□□□□ -0.62
SCAF8-202ENST00000367186 WDR24Q96S15 920 aa11.2□□□□□ -0.62
SCAF8-202ENST00000367186 IRAK4Q9NWZ3 460 aa11.2□□□□□ -0.62
SCAF8-202ENST00000367186 SCHIP1Q9P0W5 487 aaPredicted RBP11.2□□□□□ -0.62
SCAF8-202ENST00000367186 SRP68Q9UHB9 627 aaKnown RBP11.2□□□□□ -0.62
SCAF8-202ENST00000367186 NPC1L1Q9UHC9 1359 aa11.2□□□□□ -0.62
SCAF8-202ENST00000367186 IQANK1A0A1B0GTG1 560 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms