RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 PAMP19021 973 aa12.9□□□□□ -0.34
CDC42BPA-203ENST00000366766 TFAMQ00059 246 aaKnown RBP12.9□□□□□ -0.34
CDC42BPA-203ENST00000366766 PROCA1Q8NCQ7 364 aaPredicted RBP12.9□□□□□ -0.34
CDC42BPA-203ENST00000366766 COG1Q8WTW3 980 aa12.9□□□□□ -0.34
CDC42BPA-203ENST00000366766 TLK1Q9UKI8 766 aa12.9□□□□□ -0.34
CDC42BPA-203ENST00000366766 ZNF609O15014 1411 aa12.9□□□□□ -0.34
CDC42BPA-203ENST00000366766 DLG5Q8TDM6 1919 aa12.9□□□□□ -0.34
CDC42BPA-203ENST00000366766 SBK1Q52WX2 424 aa12.9□□□□□ -0.34
CDC42BPA-203ENST00000366766 EPHA10Q5JZY3 1008 aa12.9□□□□□ -0.34
CDC42BPA-203ENST00000366766 GCOM2Q9BZD3 368 aaPredicted RBP12.9□□□□□ -0.34
CDC42BPA-203ENST00000366766 RPF1Q9H9Y2 349 aaKnown RBP12.9□□□□□ -0.34
CDC42BPA-203ENST00000366766 SLC38A10Q9HBR0 1119 aa12.9□□□□□ -0.34
CDC42BPA-203ENST00000366766 ZHX2Q9Y6X8 837 aa12.9□□□□□ -0.34
CDC42BPA-203ENST00000366766 PALMO75781 387 aa12.9□□□□□ -0.34
CDC42BPA-203ENST00000366766 PDCD7Q8N8D1 485 aaKnown RBP12.9□□□□□ -0.34
CDC42BPA-203ENST00000366766 NEDD1Q8NHV4 660 aa12.9□□□□□ -0.34
CDC42BPA-203ENST00000366766 TRIM15Q9C019 465 aa12.9□□□□□ -0.34
CDC42BPA-203ENST00000366766 C2orf40Q9H1Z8 148 aa12.9□□□□□ -0.34
CDC42BPA-203ENST00000366766 TRIM33Q9UPN9 1127 aa12.9□□□□□ -0.34
CDC42BPA-203ENST00000366766 FTCDO95954 541 aa12.9□□□□□ -0.34
CDC42BPA-203ENST00000366766 NXNQ6DKJ4 435 aa12.9□□□□□ -0.34
CDC42BPA-203ENST00000366766 SYN2Q92777 582 aaPredicted RBP12.9□□□□□ -0.34
CDC42BPA-203ENST00000366766 GOLPH3LQ9H4A5 285 aa12.9□□□□□ -0.34
CDC42BPA-203ENST00000366766 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.9□□□□□ -0.34
CDC42BPA-203ENST00000366766 SLC1A1P43005 524 aa12.9□□□□□ -0.34
CDC42BPA-203ENST00000366766 SMAPO00193 183 aa12.9□□□□□ -0.34
CDC42BPA-203ENST00000366766 MGEA5O60502 916 aa12.9□□□□□ -0.34
CDC42BPA-203ENST00000366766 PDXDC2PQ6P474 469 aa12.9□□□□□ -0.34
CDC42BPA-203ENST00000366766 CRLF3Q8IUI8 442 aa12.9□□□□□ -0.34
CDC42BPA-203ENST00000366766 CIITAP33076 1130 aa12.9□□□□□ -0.35
CDC42BPA-203ENST00000366766 CYP27A1Q02318 531 aa12.9□□□□□ -0.35
CDC42BPA-203ENST00000366766 SPATS2LQ9NUQ6 558 aaKnown RBP12.9□□□□□ -0.35
CDC42BPA-203ENST00000366766 ZBED1O96006 694 aa12.89□□□□□ -0.35
CDC42BPA-203ENST00000366766 MMEP08473 750 aa12.89□□□□□ -0.35
CDC42BPA-203ENST00000366766 IREB2P48200 963 aaKnown RBP12.89□□□□□ -0.35
CDC42BPA-203ENST00000366766 SUSD4Q5VX71 490 aa12.89□□□□□ -0.35
CDC42BPA-203ENST00000366766 DARS2Q6PI48 645 aaKnown RBP12.89□□□□□ -0.35
CDC42BPA-203ENST00000366766 TRIM55Q9BYV6 548 aa12.89□□□□□ -0.35
CDC42BPA-203ENST00000366766 TOPORSQ9NS56 1045 aaPredicted RBP12.89□□□□□ -0.35
CDC42BPA-203ENST00000366766 CEMIPQ8WUJ3 1361 aa12.89□□□□□ -0.35
CDC42BPA-203ENST00000366766 C7orf25Q9BPX7 421 aa12.89□□□□□ -0.35
CDC42BPA-203ENST00000366766 NWD1Q149M9 1564 aa12.89□□□□□ -0.35
CDC42BPA-203ENST00000366766 A0A1W2PQJ5 194 aa12.89□□□□□ -0.35
CDC42BPA-203ENST00000366766 SEC31AO94979 1220 aaKnown RBP12.89□□□□□ -0.35
CDC42BPA-203ENST00000366766 CHAMP1Q96JM3 812 aa12.89□□□□□ -0.35
CDC42BPA-203ENST00000366766 TRIM4Q9C037 500 aa12.89□□□□□ -0.35
CDC42BPA-203ENST00000366766 NOP53Q9NZM5 478 aaKnown RBP12.89□□□□□ -0.35
CDC42BPA-203ENST00000366766 AP3B1O00203 1094 aa12.89□□□□□ -0.35
CDC42BPA-203ENST00000366766 CA4P22748 312 aa12.89□□□□□ -0.35
CDC42BPA-203ENST00000366766 KCNV1Q6PIU1 500 aa12.89□□□□□ -0.35
CDC42BPA-203ENST00000366766 ADAT2Q7Z6V5 191 aaKnown RBP12.89□□□□□ -0.35
CDC42BPA-203ENST00000366766 PLAAQ9Y263 795 aa12.89□□□□□ -0.35
CDC42BPA-203ENST00000366766 LRRC53A6NM62 1247 aa12.89□□□□□ -0.35
CDC42BPA-203ENST00000366766 GSG1L2A8MUP6 293 aa12.89□□□□□ -0.35
CDC42BPA-203ENST00000366766 KIF22Q14807 665 aa12.89□□□□□ -0.35
CDC42BPA-203ENST00000366766 MSTO1Q9BUK6 570 aa12.89□□□□□ -0.35
CDC42BPA-203ENST00000366766 SPATA31D1Q6ZQQ2 1576 aa12.89□□□□□ -0.35
CDC42BPA-203ENST00000366766 PRAMEF22A3QJZ6 481 aa12.89□□□□□ -0.35
CDC42BPA-203ENST00000366766 TMED2Q15363 201 aa12.89□□□□□ -0.35
CDC42BPA-203ENST00000366766 FSCBQ5H9T9 825 aa12.89□□□□□ -0.35
CDC42BPA-203ENST00000366766 SPICE1Q8N0Z3 855 aa12.89□□□□□ -0.35
CDC42BPA-203ENST00000366766 EEF2KMTQ96G04 330 aa12.89□□□□□ -0.35
CDC42BPA-203ENST00000366766 PACSIN2Q9UNF0 486 aaPredicted RBP12.89□□□□□ -0.35
CDC42BPA-203ENST00000366766 VWDEQ8N2E2 1590 aa12.89□□□□□ -0.35
CDC42BPA-203ENST00000366766 CHUKO15111 745 aa12.89□□□□□ -0.35
CDC42BPA-203ENST00000366766 MTMR1Q13613 665 aa12.89□□□□□ -0.35
CDC42BPA-203ENST00000366766 IQCB1Q15051 598 aa12.89□□□□□ -0.35
CDC42BPA-203ENST00000366766 NAA35Q5VZE5 725 aa12.89□□□□□ -0.35
CDC42BPA-203ENST00000366766 CENPKQ9BS16 269 aa12.89□□□□□ -0.35
CDC42BPA-203ENST00000366766 CXCR5P32302 372 aa12.88□□□□□ -0.35
CDC42BPA-203ENST00000366766 CYP4F22Q6NT55 531 aa12.88□□□□□ -0.35
CDC42BPA-203ENST00000366766 GDAQ9Y2T3 454 aa12.88□□□□□ -0.35
CDC42BPA-203ENST00000366766 PSMD6Q15008 389 aa12.88□□□□□ -0.35
CDC42BPA-203ENST00000366766 COA7Q96BR5 231 aa12.88□□□□□ -0.35
CDC42BPA-203ENST00000366766 UPF3AQ9H1J1 476 aaKnown RBP12.88□□□□□ -0.35
CDC42BPA-203ENST00000366766 AKT3Q9Y243 479 aa12.88□□□□□ -0.35
CDC42BPA-203ENST00000366766 IFNAR2P48551 515 aa12.88□□□□□ -0.35
CDC42BPA-203ENST00000366766 NCAPG2Q86XI2 1143 aa12.88□□□□□ -0.35
CDC42BPA-203ENST00000366766 ADAM22Q9P0K1 906 aa12.88□□□□□ -0.35
CDC42BPA-203ENST00000366766 TUBE1Q9UJT0 475 aa12.88□□□□□ -0.35
CDC42BPA-203ENST00000366766 FOXO4P98177 505 aa12.88□□□□□ -0.35
CDC42BPA-203ENST00000366766 LRRC41Q15345 812 aa12.88□□□□□ -0.35
CDC42BPA-203ENST00000366766 DOK7Q18PE1 504 aa12.88□□□□□ -0.35
CDC42BPA-203ENST00000366766 ZNF667Q5HYK9 610 aa12.88□□□□□ -0.35
CDC42BPA-203ENST00000366766 FAM193BQ96PV7 902 aaPredicted RBP12.88□□□□□ -0.35
CDC42BPA-203ENST00000366766 LRRC4Q9HBW1 653 aa12.88□□□□□ -0.35
CDC42BPA-203ENST00000366766 SEPT10Q9P0V9 454 aa12.88□□□□□ -0.35
CDC42BPA-203ENST00000366766 MAP3K7O43318 606 aa12.88□□□□□ -0.35
CDC42BPA-203ENST00000366766 DIXDC1Q155Q3 683 aa12.88□□□□□ -0.35
CDC42BPA-203ENST00000366766 JADE1Q6IE81 842 aa12.88□□□□□ -0.35
CDC42BPA-203ENST00000366766 SIX6OS1Q8N1H7 587 aa12.88□□□□□ -0.35
CDC42BPA-203ENST00000366766 PAGR1Q9BTK6 254 aa12.88□□□□□ -0.35
CDC42BPA-203ENST00000366766 ASNSD1Q9NWL6 643 aa12.88□□□□□ -0.35
CDC42BPA-203ENST00000366766 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.88□□□□□ -0.35
CDC42BPA-203ENST00000366766 TAF1BQ53T94 588 aaPredicted RBP12.88□□□□□ -0.35
CDC42BPA-203ENST00000366766 GADL1Q6ZQY3 521 aa12.88□□□□□ -0.35
CDC42BPA-203ENST00000366766 RSRC2Q7L4I2 434 aaKnown RBP12.88□□□□□ -0.35
CDC42BPA-203ENST00000366766 ATP6V1G3Q96LB4 118 aa12.88□□□□□ -0.35
CDC42BPA-203ENST00000366766 AIFM3Q96NN9 605 aa12.88□□□□□ -0.35
CDC42BPA-203ENST00000366766 CALN1Q9BXU9 219 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms