RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 KRTAP5-3Q6L8H2 238 aa6.56□□□□□ -1.36
RNU4-28P-201ENST00000364739 REXO1L1PQ8IX06 675 aa6.56□□□□□ -1.36
RNU4-28P-201ENST00000364739 BCL6BQ8N143 479 aaPredicted RBP6.56□□□□□ -1.36
RNU4-28P-201ENST00000364739 UBR7Q8N806 425 aa6.56□□□□□ -1.36
RNU4-28P-201ENST00000364739 FOXB1Q99853 325 aa6.56□□□□□ -1.36
RNU4-28P-201ENST00000364739 ORAI3Q9BRQ5 295 aa6.56□□□□□ -1.36
RNU4-28P-201ENST00000364739 MEGF9Q9H1U4 602 aa6.56□□□□□ -1.36
RNU4-28P-201ENST00000364739 MS4A5Q9H3V2 200 aa6.56□□□□□ -1.36
RNU4-28P-201ENST00000364739 SPTLC3Q9NUV7 552 aa6.56□□□□□ -1.36
RNU4-28P-201ENST00000364739 PLAAQ9Y263 795 aa6.56□□□□□ -1.36
RNU4-28P-201ENST00000364739 SPO11Q9Y5K1 396 aa6.56□□□□□ -1.36
RNU4-28P-201ENST00000364739 SLC4A7Q9Y6M7 1214 aa6.56□□□□□ -1.36
RNU4-28P-201ENST00000364739 UBA6A0AVT1 1052 aaPredicted RBP6.55□□□□□ -1.36
RNU4-28P-201ENST00000364739 GSG1L2A8MUP6 293 aa6.55□□□□□ -1.36
RNU4-28P-201ENST00000364739 TGM5O43548 720 aa6.55□□□□□ -1.36
RNU4-28P-201ENST00000364739 PDE8AO60658 829 aa6.55□□□□□ -1.36
RNU4-28P-201ENST00000364739 APOL3O95236 402 aa6.55□□□□□ -1.36
RNU4-28P-201ENST00000364739 MRE11P49959 708 aa6.55□□□□□ -1.36
RNU4-28P-201ENST00000364739 SCNN1BP51168 640 aa6.55□□□□□ -1.36
RNU4-28P-201ENST00000364739 PRAMEF9Q5VWM5 478 aa6.55□□□□□ -1.36
RNU4-28P-201ENST00000364739 TMEM200BQ69YZ2 307 aa6.55□□□□□ -1.36
RNU4-28P-201ENST00000364739 SLFN12LQ6IEE8 588 aa6.55□□□□□ -1.36
RNU4-28P-201ENST00000364739 SDE2Q6IQ49 451 aa6.55□□□□□ -1.36
RNU4-28P-201ENST00000364739 UNQ6494/PRO21346Q6UXR6 183 aa6.55□□□□□ -1.36
RNU4-28P-201ENST00000364739 KIF18BQ86Y91 864 aa6.55□□□□□ -1.36
RNU4-28P-201ENST00000364739 IFNL2Q8IZJ0 200 aa6.55□□□□□ -1.36
RNU4-28P-201ENST00000364739 MAML3Q96JK9 1138 aa6.55□□□□□ -1.36
RNU4-28P-201ENST00000364739 LMF1Q96S06 567 aa6.55□□□□□ -1.36
RNU4-28P-201ENST00000364739 SEMA4AQ9H3S1 761 aa6.55□□□□□ -1.36
RNU4-28P-201ENST00000364739 FAM184BQ9ULE4 1060 aa6.55□□□□□ -1.36
RNU4-28P-201ENST00000364739 ADRB1P08588 477 aa6.54□□□□□ -1.36
RNU4-28P-201ENST00000364739 ROM1Q03395 351 aa6.54□□□□□ -1.36
RNU4-28P-201ENST00000364739 ICAM4Q14773 271 aa6.54□□□□□ -1.36
RNU4-28P-201ENST00000364739 MYBPC3Q14896 1274 aa6.54□□□□□ -1.36
RNU4-28P-201ENST00000364739 TTC38Q5R3I4 469 aa6.54□□□□□ -1.36
RNU4-28P-201ENST00000364739 SLFN13Q68D06 897 aa6.54□□□□□ -1.36
RNU4-28P-201ENST00000364739 TRIM68Q6AZZ1 485 aa6.54□□□□□ -1.36
RNU4-28P-201ENST00000364739 GGNQ86UU5 652 aa6.54□□□□□ -1.36
RNU4-28P-201ENST00000364739 RTKN2Q8IZC4 609 aa6.54□□□□□ -1.36
RNU4-28P-201ENST00000364739 PPM1KQ8N3J5 372 aa6.54□□□□□ -1.36
RNU4-28P-201ENST00000364739 SMC1BQ8NDV3 1235 aa6.54□□□□□ -1.36
RNU4-28P-201ENST00000364739 C8orf49Q96NF6 230 aa6.54□□□□□ -1.36
RNU4-28P-201ENST00000364739 POFUT1Q9H488 388 aa6.54□□□□□ -1.36
RNU4-28P-201ENST00000364739 ZMAT4Q9H898 229 aa6.54□□□□□ -1.36
RNU4-28P-201ENST00000364739 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.54□□□□□ -1.36
RNU4-28P-201ENST00000364739 SMPD4Q9NXE4 827 aa6.54□□□□□ -1.36
RNU4-28P-201ENST00000364739 FBXO10Q9UK96 956 aa6.54□□□□□ -1.36
RNU4-28P-201ENST00000364739 TMA7Q9Y2S6 64 aaKnown RBP6.54□□□□□ -1.36
RNU4-28P-201ENST00000364739 NR2E1Q9Y466 385 aa6.54□□□□□ -1.36
RNU4-28P-201ENST00000364739 ADCYAP1R1P41586 468 aa6.53□□□□□ -1.36
RNU4-28P-201ENST00000364739 KPNA1P52294 538 aaPredicted RBP6.53□□□□□ -1.36
RNU4-28P-201ENST00000364739 IL2P60568 153 aa6.53□□□□□ -1.36
RNU4-28P-201ENST00000364739 EFEMP1Q12805 493 aa6.53□□□□□ -1.36
RNU4-28P-201ENST00000364739 ADAM15Q13444 863 aa6.53□□□□□ -1.36
RNU4-28P-201ENST00000364739 SART3Q15020 963 aaKnown RBP6.53□□□□□ -1.36
RNU4-28P-201ENST00000364739 EPHA7Q15375 998 aa6.53□□□□□ -1.36
RNU4-28P-201ENST00000364739 TAX1BP1Q86VP1 789 aa6.53□□□□□ -1.36
RNU4-28P-201ENST00000364739 AHI1Q8N157 1196 aa6.53□□□□□ -1.36
RNU4-28P-201ENST00000364739 OR14K1Q8NGZ2 314 aa6.53□□□□□ -1.36
RNU4-28P-201ENST00000364739 NEIL1Q96FI4 390 aaPredicted RBP6.53□□□□□ -1.36
RNU4-28P-201ENST00000364739 DPYSL5Q9BPU6 564 aa6.53□□□□□ -1.36
RNU4-28P-201ENST00000364739 MYL10Q9BUA6 226 aa6.53□□□□□ -1.36
RNU4-28P-201ENST00000364739 MATN2O00339 956 aa6.52□□□□□ -1.37
RNU4-28P-201ENST00000364739 STAT3P40763 770 aa6.52□□□□□ -1.37
RNU4-28P-201ENST00000364739 MEOX1P50221 254 aa6.52□□□□□ -1.37
RNU4-28P-201ENST00000364739 SMAD3P84022 425 aaKnown RBP6.52□□□□□ -1.37
RNU4-28P-201ENST00000364739 ZMAT1Q5H9K5 638 aa6.52□□□□□ -1.37
RNU4-28P-201ENST00000364739 AGBL4Q5VU57 503 aa6.52□□□□□ -1.37
RNU4-28P-201ENST00000364739 USP30Q70CQ3 517 aa6.52□□□□□ -1.37
RNU4-28P-201ENST00000364739 CIR1Q86X95 450 aaPredicted RBP6.52□□□□□ -1.37
RNU4-28P-201ENST00000364739 E2F7Q96AV8 911 aa6.52□□□□□ -1.37
RNU4-28P-201ENST00000364739 ZNF496Q96IT1 587 aaPredicted RBP6.52□□□□□ -1.37
RNU4-28P-201ENST00000364739 SCYL1Q96KG9 808 aa6.52□□□□□ -1.37
RNU4-28P-201ENST00000364739 C12orf65Q9H3J6 166 aaKnown RBP6.52□□□□□ -1.37
RNU4-28P-201ENST00000364739 FOXS1O43638 330 aa6.51□□□□□ -1.37
RNU4-28P-201ENST00000364739 PRPF6O94906 941 aaKnown RBP6.51□□□□□ -1.37
RNU4-28P-201ENST00000364739 FKBP9O95302 570 aa6.51□□□□□ -1.37
RNU4-28P-201ENST00000364739 HSD3B2P26439 372 aa6.51□□□□□ -1.37
RNU4-28P-201ENST00000364739 MAGEA10P43363 369 aaPredicted RBP6.51□□□□□ -1.37
RNU4-28P-201ENST00000364739 ID4P47928 161 aa6.51□□□□□ -1.37
RNU4-28P-201ENST00000364739 RAC3P60763 192 aa6.51□□□□□ -1.37
RNU4-28P-201ENST00000364739 ZNF827Q17R98 1081 aa6.51□□□□□ -1.37
RNU4-28P-201ENST00000364739 ZNF568Q3ZCX4 644 aa6.51□□□□□ -1.37
RNU4-28P-201ENST00000364739 TCTN3Q6NUS6 607 aa6.51□□□□□ -1.37
RNU4-28P-201ENST00000364739 ZNF585AQ6P3V2 769 aa6.51□□□□□ -1.37
RNU4-28P-201ENST00000364739 FKBP9P1Q75LS8 142 aa6.51□□□□□ -1.37
RNU4-28P-201ENST00000364739 STRA8Q7Z7C7 330 aa6.51□□□□□ -1.37
RNU4-28P-201ENST00000364739 EFHBQ8N7U6 833 aa6.51□□□□□ -1.37
RNU4-28P-201ENST00000364739 C7orf31Q8N865 590 aa6.51□□□□□ -1.37
RNU4-28P-201ENST00000364739 GIMAP8Q8ND71 665 aaPredicted RBP6.51□□□□□ -1.37
RNU4-28P-201ENST00000364739 CHST13Q8NET6 341 aa6.51□□□□□ -1.37
RNU4-28P-201ENST00000364739 OR2W6PQ8NHA6 318 aa6.51□□□□□ -1.37
RNU4-28P-201ENST00000364739 WWC2-AS2Q96NR7 200 aa6.51□□□□□ -1.37
RNU4-28P-201ENST00000364739 ELL2O00472 640 aaPredicted RBP6.5□□□□□ -1.37
RNU4-28P-201ENST00000364739 ARHGAP6O43182 974 aa6.5□□□□□ -1.37
RNU4-28P-201ENST00000364739 CDC14BO60729 498 aa6.5□□□□□ -1.37
RNU4-28P-201ENST00000364739 ADCY2Q08462 1091 aa6.5□□□□□ -1.37
RNU4-28P-201ENST00000364739 SPATS1Q496A3 300 aa6.5□□□□□ -1.37
RNU4-28P-201ENST00000364739 RNF180Q86T96 592 aa6.5□□□□□ -1.37
RNU4-28P-201ENST00000364739 NME9Q86XW9 330 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms