RNA–Protein interactions for RNA: ENST00000361675.6

CALD1-201, Transcript of caldesmon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALD1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-201ENST00000361675 SMYD4Q8IYR2 804 aaPredicted RBP9.8□□□□□ -0.84
CALD1-201ENST00000361675 TMC2Q8TDI7 906 aa9.8□□□□□ -0.84
CALD1-201ENST00000361675 CHMP6Q96FZ7 201 aa9.8□□□□□ -0.84
CALD1-201ENST00000361675 ISCA1Q9BUE6 129 aa9.8□□□□□ -0.84
CALD1-201ENST00000361675 NAA15Q9BXJ9 866 aaKnown RBP9.8□□□□□ -0.84
CALD1-201ENST00000361675 ETNK2Q9NVF9 386 aa9.8□□□□□ -0.84
CALD1-201ENST00000361675 ZMYND8Q9ULU4 1186 aaPredicted RBP9.8□□□□□ -0.84
CALD1-201ENST00000361675 EP400Q96L91 3159 aa9.8□□□□□ -0.84
CALD1-201ENST00000361675 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.8□□□□□ -0.84
CALD1-201ENST00000361675 TRIM64A6NGJ6 449 aa9.8□□□□□ -0.84
CALD1-201ENST00000361675 TRIM64BA6NI03 449 aa9.8□□□□□ -0.84
CALD1-201ENST00000361675 MFAP3LO75121 409 aa9.8□□□□□ -0.84
CALD1-201ENST00000361675 KRT16P08779 473 aa9.8□□□□□ -0.84
CALD1-201ENST00000361675 EEF2P13639 858 aaKnown RBP9.8□□□□□ -0.84
CALD1-201ENST00000361675 DDX5P17844 614 aaKnown RBP9.8□□□□□ -0.84
CALD1-201ENST00000361675 SIM2Q14190 667 aaPredicted RBP9.8□□□□□ -0.84
CALD1-201ENST00000361675 LRRC41Q15345 812 aa9.8□□□□□ -0.84
CALD1-201ENST00000361675 EAPPQ56P03 285 aaPredicted RBP9.8□□□□□ -0.84
CALD1-201ENST00000361675 THOC7Q6I9Y2 204 aaKnown RBP9.8□□□□□ -0.84
CALD1-201ENST00000361675 DTX3LQ8TDB6 740 aa9.8□□□□□ -0.84
CALD1-201ENST00000361675 DNAJC1Q96KC8 554 aaKnown RBP9.8□□□□□ -0.84
CALD1-201ENST00000361675 DRC3Q9H069 523 aa9.8□□□□□ -0.84
CALD1-201ENST00000361675 SUCLA2Q9P2R7 463 aaPredicted RBP9.8□□□□□ -0.84
CALD1-201ENST00000361675 BARX2Q9UMQ3 279 aaPredicted RBP9.8□□□□□ -0.84
CALD1-201ENST00000361675 FAF1Q9UNN5 650 aaPredicted RBP9.8□□□□□ -0.84
CALD1-201ENST00000361675 CYP21A2P08686 494 aa9.79□□□□□ -0.84
CALD1-201ENST00000361675 GALK1P51570 392 aa9.79□□□□□ -0.84
CALD1-201ENST00000361675 NLRP5P59047 1200 aa9.79□□□□□ -0.84
CALD1-201ENST00000361675 UBXN1Q04323 297 aa9.79□□□□□ -0.84
CALD1-201ENST00000361675 UBE4AQ14139 1066 aa9.79□□□□□ -0.84
CALD1-201ENST00000361675 TAF12Q16514 161 aa9.79□□□□□ -0.84
CALD1-201ENST00000361675 AENQ8WTP8 325 aaKnown RBP9.79□□□□□ -0.84
CALD1-201ENST00000361675 SPIRE2Q8WWL2 714 aa9.79□□□□□ -0.84
CALD1-201ENST00000361675 PRPF31Q8WWY3 499 aaKnown RBP9.79□□□□□ -0.84
CALD1-201ENST00000361675 SCG3Q8WXD2 468 aaKnown RBP9.79□□□□□ -0.84
CALD1-201ENST00000361675 KRT12Q99456 494 aa9.79□□□□□ -0.84
CALD1-201ENST00000361675 DDX18Q9NVP1 670 aaKnown RBP9.79□□□□□ -0.84
CALD1-201ENST00000361675 DKK3Q9UBP4 350 aa9.79□□□□□ -0.84
CALD1-201ENST00000361675 SKIP12755 728 aa9.79□□□□□ -0.84
CALD1-201ENST00000361675 CETN2P41208 172 aa9.79□□□□□ -0.84
CALD1-201ENST00000361675 FMR1Q06787 632 aaKnown RBP eCLIP9.79□□□□□ -0.84
CALD1-201ENST00000361675 TCIRG1Q13488 830 aa9.79□□□□□ -0.84
CALD1-201ENST00000361675 ZFAND2BQ8WV99 257 aa9.79□□□□□ -0.84
CALD1-201ENST00000361675 STAMQ92783 540 aa9.79□□□□□ -0.84
CALD1-201ENST00000361675 DMAP1Q9NPF5 467 aaPredicted RBP9.79□□□□□ -0.84
CALD1-201ENST00000361675 SYNDIG1LA6NDD5 238 aa9.78□□□□□ -0.84
CALD1-201ENST00000361675 SNAP23O00161 211 aa9.78□□□□□ -0.84
CALD1-201ENST00000361675 FOXD2O60548 495 aaPredicted RBP9.78□□□□□ -0.84
CALD1-201ENST00000361675 DNAJC6O75061 913 aa9.78□□□□□ -0.84
CALD1-201ENST00000361675 NDUFA10O95299 355 aa9.78□□□□□ -0.84
CALD1-201ENST00000361675 SARSP49591 514 aaKnown RBP9.78□□□□□ -0.84
CALD1-201ENST00000361675 CSE1LP55060 971 aaKnown RBP9.78□□□□□ -0.84
CALD1-201ENST00000361675 PPP2R2AP63151 447 aa9.78□□□□□ -0.84
CALD1-201ENST00000361675 POSTNQ15063 836 aa9.78□□□□□ -0.84
CALD1-201ENST00000361675 C21orf62-AS1Q17RA5 79 aa9.78□□□□□ -0.84
CALD1-201ENST00000361675 GLE1Q53GS7 698 aaKnown RBP9.78□□□□□ -0.84
CALD1-201ENST00000361675 NFRKBQ6P4R8 1299 aa9.78□□□□□ -0.84
CALD1-201ENST00000361675 ISLR2Q6UXK2 745 aa9.78□□□□□ -0.84
CALD1-201ENST00000361675 SPATA4Q8NEY3 305 aa9.78□□□□□ -0.84
CALD1-201ENST00000361675 NKX2-3Q8TAU0 364 aa9.78□□□□□ -0.84
CALD1-201ENST00000361675 HAUS4Q9H6D7 363 aa9.78□□□□□ -0.84
CALD1-201ENST00000361675 ZBTB1Q9Y2K1 713 aa9.78□□□□□ -0.84
CALD1-201ENST00000361675 TXNDC9O14530 226 aa9.78□□□□□ -0.84
CALD1-201ENST00000361675 HOXA10P31260 410 aaPredicted RBP9.78□□□□□ -0.84
CALD1-201ENST00000361675 TMED10P49755 219 aaKnown RBP9.78□□□□□ -0.84
CALD1-201ENST00000361675 HDAC4P56524 1084 aa9.78□□□□□ -0.84
CALD1-201ENST00000361675 GPR162Q16538 588 aa9.78□□□□□ -0.84
CALD1-201ENST00000361675 KRT27Q7Z3Y8 459 aa9.78□□□□□ -0.84
CALD1-201ENST00000361675 LILRB2Q8N423 598 aa9.78□□□□□ -0.84
CALD1-201ENST00000361675 L3MBTL3Q96JM7 780 aaPredicted RBP9.78□□□□□ -0.84
CALD1-201ENST00000361675 BPIFA3Q9BQP9 254 aa9.78□□□□□ -0.84
CALD1-201ENST00000361675 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.78□□□□□ -0.84
CALD1-201ENST00000361675 SH3GLB1Q9Y371 365 aa9.78□□□□□ -0.84
CALD1-201ENST00000361675 RBMX2Q9Y388 322 aaKnown RBP9.78□□□□□ -0.84
CALD1-201ENST00000361675 DUSP10Q9Y6W6 482 aa9.78□□□□□ -0.84
CALD1-201ENST00000361675 JCADQ9P266 1359 aa9.78□□□□□ -0.84
CALD1-201ENST00000361675 A0A1W2PRQ8 180 aa9.78□□□□□ -0.84
CALD1-201ENST00000361675 EYA2O00167 538 aa9.78□□□□□ -0.84
CALD1-201ENST00000361675 NCK2O43639 380 aa9.78□□□□□ -0.84
CALD1-201ENST00000361675 SHBGP04278 402 aa9.78□□□□□ -0.84
CALD1-201ENST00000361675 CDC27P30260 824 aa9.78□□□□□ -0.84
CALD1-201ENST00000361675 SLC16A2P36021 539 aa9.78□□□□□ -0.84
CALD1-201ENST00000361675 CCR3P51677 355 aa9.78□□□□□ -0.84
CALD1-201ENST00000361675 SEPT6Q14141 434 aa9.78□□□□□ -0.84
CALD1-201ENST00000361675 C6orf89Q6UWU4 347 aa9.78□□□□□ -0.84
CALD1-201ENST00000361675 RFX8Q6ZV50 586 aa9.78□□□□□ -0.84
CALD1-201ENST00000361675 SMIM5Q71RC9 77 aa9.78□□□□□ -0.84
CALD1-201ENST00000361675 INTS8Q75QN2 995 aaKnown RBP9.78□□□□□ -0.84
CALD1-201ENST00000361675 TRAPPC11Q7Z392 1133 aa9.78□□□□□ -0.84
CALD1-201ENST00000361675 ANKRD42Q8N9B4 389 aa9.78□□□□□ -0.84
CALD1-201ENST00000361675 ZBTB8BQ8NAP8 495 aaPredicted RBP9.78□□□□□ -0.84
CALD1-201ENST00000361675 LINC00301Q8NCQ3 95 aa9.78□□□□□ -0.84
CALD1-201ENST00000361675 CCT6BQ92526 530 aa9.78□□□□□ -0.84
CALD1-201ENST00000361675 PAWRQ96IZ0 340 aaKnown RBP9.78□□□□□ -0.84
CALD1-201ENST00000361675 CDK5RAP3Q96JB5 506 aa9.78□□□□□ -0.84
CALD1-201ENST00000361675 CTAGE1Q96RT6 745 aa9.78□□□□□ -0.84
CALD1-201ENST00000361675 LIN7AO14910 233 aaPredicted RBP9.77□□□□□ -0.84
CALD1-201ENST00000361675 FOXP2O15409 715 aa9.77□□□□□ -0.84
CALD1-201ENST00000361675 ACSL4O60488 711 aa9.77□□□□□ -0.84
CALD1-201ENST00000361675 NPTXRO95502 500 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms