RNA–Protein interactions for RNA: ENST00000360540.9

PCMTD1-201, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCMTD1, Length 4,252 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-201ENST00000360540 FAM47CQ5HY64 1035 aa15.22■□□□□ 0.03
PCMTD1-201ENST00000360540 FAM160B2Q86V87 743 aa15.22■□□□□ 0.03
PCMTD1-201ENST00000360540 PBKQ96KB5 322 aa15.22■□□□□ 0.03
PCMTD1-201ENST00000360540 C11orf70Q9BRQ4 267 aa15.22■□□□□ 0.03
PCMTD1-201ENST00000360540 PLCB1Q9NQ66 1216 aa15.22■□□□□ 0.03
PCMTD1-201ENST00000360540 NRBP2Q9NSY0 501 aa15.22■□□□□ 0.03
PCMTD1-201ENST00000360540 RNF146Q9NTX7 359 aa15.22■□□□□ 0.03
PCMTD1-201ENST00000360540 GABBR1Q9UBS5 961 aa15.22■□□□□ 0.03
PCMTD1-201ENST00000360540 CNOT8Q9UFF9 292 aaKnown RBP15.22■□□□□ 0.03
PCMTD1-201ENST00000360540 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.22■□□□□ 0.03
PCMTD1-201ENST00000360540 PALM3A6NDB9 673 aaPredicted RBP15.21■□□□□ 0.03
PCMTD1-201ENST00000360540 HIP1RO75146 1068 aa15.21■□□□□ 0.03
PCMTD1-201ENST00000360540 STAM2O75886 525 aa15.21■□□□□ 0.03
PCMTD1-201ENST00000360540 APBA1Q02410 837 aa15.21■□□□□ 0.03
PCMTD1-201ENST00000360540 DDX42Q86XP3 938 aaKnown RBP eCLIP15.21■□□□□ 0.03
PCMTD1-201ENST00000360540 GDAP1Q8TB36 358 aa15.21■□□□□ 0.03
PCMTD1-201ENST00000360540 PNKPQ96T60 521 aa15.21■□□□□ 0.03
PCMTD1-201ENST00000360540 TTC7AQ9ULT0 858 aaPredicted RBP15.21■□□□□ 0.03
PCMTD1-201ENST00000360540 RNF8O76064 485 aa15.21■□□□□ 0.03
PCMTD1-201ENST00000360540 ECE1P42892 770 aa15.21■□□□□ 0.03
PCMTD1-201ENST00000360540 RC3H1Q5TC82 1133 aaKnown RBP15.21■□□□□ 0.03
PCMTD1-201ENST00000360540 EMBQ6PCB8 327 aa15.21■□□□□ 0.03
PCMTD1-201ENST00000360540 SIGLEC1Q9BZZ2 1709 aa15.21■□□□□ 0.03
PCMTD1-201ENST00000360540 NOD1Q9Y239 953 aa15.21■□□□□ 0.03
PCMTD1-201ENST00000360540 AKT3Q9Y243 479 aa15.21■□□□□ 0.03
PCMTD1-201ENST00000360540 MAD1L1Q9Y6D9 718 aa15.21■□□□□ 0.03
PCMTD1-201ENST00000360540 WDR91A4D1P6 747 aa15.21■□□□□ 0.03
PCMTD1-201ENST00000360540 WNT7AO00755 349 aa15.21■□□□□ 0.03
PCMTD1-201ENST00000360540 ECEL1O95672 775 aa15.21■□□□□ 0.03
PCMTD1-201ENST00000360540 KLRC1P26715 233 aa15.21■□□□□ 0.03
PCMTD1-201ENST00000360540 MAN1A1P33908 653 aa15.21■□□□□ 0.03
PCMTD1-201ENST00000360540 USP11P51784 963 aa15.21■□□□□ 0.03
PCMTD1-201ENST00000360540 SLC8A3P57103 927 aa15.21■□□□□ 0.03
PCMTD1-201ENST00000360540 KRT81Q14533 505 aa15.21■□□□□ 0.03
PCMTD1-201ENST00000360540 VPS72Q15906 364 aa15.21■□□□□ 0.03
PCMTD1-201ENST00000360540 C10orf76Q5T2E6 689 aa15.21■□□□□ 0.03
PCMTD1-201ENST00000360540 ACER1Q8TDN7 264 aa15.21■□□□□ 0.03
PCMTD1-201ENST00000360540 TCP11Q8WWU5 503 aa15.21■□□□□ 0.03
PCMTD1-201ENST00000360540 FAM149B1Q96BN6 582 aa15.21■□□□□ 0.03
PCMTD1-201ENST00000360540 TBC1D31Q96DN5 1066 aa15.21■□□□□ 0.03
PCMTD1-201ENST00000360540 TMEM39BQ9GZU3 492 aa15.21■□□□□ 0.03
PCMTD1-201ENST00000360540 FAM114A2Q9NRY5 505 aa15.21■□□□□ 0.03
PCMTD1-201ENST00000360540 H7C0C1 242 aa15.2■□□□□ 0.02
PCMTD1-201ENST00000360540 ATP5OP48047 213 aa15.2■□□□□ 0.02
PCMTD1-201ENST00000360540 RNF14Q9UBS8 474 aa15.2■□□□□ 0.02
PCMTD1-201ENST00000360540 ZNF233A6NK53 670 aa15.2■□□□□ 0.02
PCMTD1-201ENST00000360540 UCHL3P15374 230 aa15.2■□□□□ 0.02
PCMTD1-201ENST00000360540 PPP2R5EQ16537 467 aa15.2■□□□□ 0.02
PCMTD1-201ENST00000360540 CCDC110Q8TBZ0 833 aa15.2■□□□□ 0.02
PCMTD1-201ENST00000360540 PPP1R12CQ9BZL4 782 aa15.2■□□□□ 0.02
PCMTD1-201ENST00000360540 RBM12Q9NTZ6 932 aaKnown RBP15.2■□□□□ 0.02
PCMTD1-201ENST00000360540 KRT14P02533 472 aa15.2■□□□□ 0.02
PCMTD1-201ENST00000360540 QARSP47897 775 aaKnown RBP15.2■□□□□ 0.02
PCMTD1-201ENST00000360540 KCNJ6P48051 423 aa15.2■□□□□ 0.02
PCMTD1-201ENST00000360540 GRB10Q13322 594 aa15.2■□□□□ 0.02
PCMTD1-201ENST00000360540 KCTD2Q14681 263 aa15.2■□□□□ 0.02
PCMTD1-201ENST00000360540 E2F5Q15329 346 aa15.2■□□□□ 0.02
PCMTD1-201ENST00000360540 E2F4Q16254 413 aa15.2■□□□□ 0.02
PCMTD1-201ENST00000360540 CFAP157Q5JU67 520 aa15.2■□□□□ 0.02
PCMTD1-201ENST00000360540 TMEM270Q6UE05 265 aa15.2■□□□□ 0.02
PCMTD1-201ENST00000360540 SLC30A5Q8TAD4 765 aa15.2■□□□□ 0.02
PCMTD1-201ENST00000360540 RNF25Q96BH1 459 aaPredicted RBP15.2■□□□□ 0.02
PCMTD1-201ENST00000360540 NUDT12Q9BQG2 462 aa15.2■□□□□ 0.02
PCMTD1-201ENST00000360540 MSTO1Q9BUK6 570 aa15.2■□□□□ 0.02
PCMTD1-201ENST00000360540 CYTH3O43739 400 aa15.2■□□□□ 0.02
PCMTD1-201ENST00000360540 ZSCAN20P17040 1043 aaPredicted RBP15.2■□□□□ 0.02
PCMTD1-201ENST00000360540 COPB2P35606 906 aa15.2■□□□□ 0.02
PCMTD1-201ENST00000360540 VAMP7P51809 220 aa15.2■□□□□ 0.02
PCMTD1-201ENST00000360540 YWHAGP61981 247 aaKnown RBP eCLIP15.2■□□□□ 0.02
PCMTD1-201ENST00000360540 KCTD19Q17RG1 926 aaPredicted RBP15.2■□□□□ 0.02
PCMTD1-201ENST00000360540 HAUS6Q7Z4H7 955 aa15.2■□□□□ 0.02
PCMTD1-201ENST00000360540 SAT1P21673 171 aa15.19■□□□□ 0.02
PCMTD1-201ENST00000360540 CDO1Q16878 200 aa15.19■□□□□ 0.02
PCMTD1-201ENST00000360540 NEK9Q8TD19 979 aa15.19■□□□□ 0.02
PCMTD1-201ENST00000360540 CCDC97Q96F63 343 aaPredicted RBP15.19■□□□□ 0.02
PCMTD1-201ENST00000360540 CAPN6Q9Y6Q1 641 aa15.19■□□□□ 0.02
PCMTD1-201ENST00000360540 MYO1CO00159 1063 aa15.19■□□□□ 0.02
PCMTD1-201ENST00000360540 NPEPPSP55786 919 aa15.19■□□□□ 0.02
PCMTD1-201ENST00000360540 ITIH3Q06033 890 aa15.19■□□□□ 0.02
PCMTD1-201ENST00000360540 MTM1Q13496 603 aa15.19■□□□□ 0.02
PCMTD1-201ENST00000360540 EPC2Q52LR7 807 aa15.19■□□□□ 0.02
PCMTD1-201ENST00000360540 FAM133BQ5BKY9 247 aaKnown RBP15.19■□□□□ 0.02
PCMTD1-201ENST00000360540 CATSPER3Q86XQ3 398 aa15.19■□□□□ 0.02
PCMTD1-201ENST00000360540 OR2W6PQ8NHA6 318 aa15.19■□□□□ 0.02
PCMTD1-201ENST00000360540 MAIP1Q8WWC4 291 aa15.19■□□□□ 0.02
PCMTD1-201ENST00000360540 INTS2Q9H0H0 1204 aaKnown RBP15.19■□□□□ 0.02
PCMTD1-201ENST00000360540 L2HGDHQ9H9P8 463 aa15.19■□□□□ 0.02
PCMTD1-201ENST00000360540 SEPT10Q9P0V9 454 aa15.19■□□□□ 0.02
PCMTD1-201ENST00000360540 ANAPC5Q9UJX4 755 aa15.19■□□□□ 0.02
PCMTD1-201ENST00000360540 GYS1P13807 737 aa15.19■□□□□ 0.02
PCMTD1-201ENST00000360540 TMED2Q15363 201 aa15.19■□□□□ 0.02
PCMTD1-201ENST00000360540 FYB2Q5VWT5 728 aa15.19■□□□□ 0.02
PCMTD1-201ENST00000360540 PLA2G4FQ68DD2 849 aa15.19■□□□□ 0.02
PCMTD1-201ENST00000360540 PRPF38AQ8NAV1 312 aaKnown RBP15.19■□□□□ 0.02
PCMTD1-201ENST00000360540 SLIT1O75093 1534 aa15.19■□□□□ 0.02
PCMTD1-201ENST00000360540 CYP26A1O43174 497 aa15.18■□□□□ 0.02
PCMTD1-201ENST00000360540 KRT1P04264 644 aa15.18■□□□□ 0.02
PCMTD1-201ENST00000360540 HMGCS2P54868 508 aa15.18■□□□□ 0.02
PCMTD1-201ENST00000360540 SMAD1Q15797 465 aaKnown RBP15.18■□□□□ 0.02
PCMTD1-201ENST00000360540 CCDC38Q502W7 563 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms