RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 PLAAQ9Y263 795 aa13.13□□□□□ -0.31
DNMT1-202ENST00000359526 ATF5Q9Y2D1 282 aaPredicted RBP13.13□□□□□ -0.31
DNMT1-202ENST00000359526 ARHGEF28Q8N1W1 1705 aaKnown RBP13.13□□□□□ -0.31
DNMT1-202ENST00000359526 EXOC1LA0A1B0GW35 172 aa13.13□□□□□ -0.31
DNMT1-202ENST00000359526 PRAMEF22A3QJZ6 481 aa13.13□□□□□ -0.31
DNMT1-202ENST00000359526 DCTN3O75935 186 aa13.13□□□□□ -0.31
DNMT1-202ENST00000359526 CAMTA2O94983 1202 aa13.13□□□□□ -0.31
DNMT1-202ENST00000359526 CYP2E1P05181 493 aaPredicted RBP13.13□□□□□ -0.31
DNMT1-202ENST00000359526 SLFN12LQ6IEE8 588 aa13.13□□□□□ -0.31
DNMT1-202ENST00000359526 KSR1Q8IVT5 923 aa13.13□□□□□ -0.31
DNMT1-202ENST00000359526 MB21D2Q8IYB1 491 aaPredicted RBP13.13□□□□□ -0.31
DNMT1-202ENST00000359526 EFHD1Q9BUP0 239 aa13.13□□□□□ -0.31
DNMT1-202ENST00000359526 DRC3Q9H069 523 aa13.13□□□□□ -0.31
DNMT1-202ENST00000359526 SEPT10Q9P0V9 454 aa13.13□□□□□ -0.31
DNMT1-202ENST00000359526 IQANK1A0A1B0GTG1 560 aa13.13□□□□□ -0.31
DNMT1-202ENST00000359526 SMARCA1P28370 1054 aa13.13□□□□□ -0.31
DNMT1-202ENST00000359526 DDIT3P35638 169 aa13.13□□□□□ -0.31
DNMT1-202ENST00000359526 ECE1P42892 770 aa13.13□□□□□ -0.31
DNMT1-202ENST00000359526 NAA30Q147X3 362 aaPredicted RBP13.13□□□□□ -0.31
DNMT1-202ENST00000359526 SBK1Q52WX2 424 aa13.13□□□□□ -0.31
DNMT1-202ENST00000359526 CENPUQ71F23 418 aa13.13□□□□□ -0.31
DNMT1-202ENST00000359526 ABTB1Q969K4 478 aaPredicted RBP13.13□□□□□ -0.31
DNMT1-202ENST00000359526 SEPT9Q9UHD8 586 aaPredicted RBP13.13□□□□□ -0.31
DNMT1-202ENST00000359526 HACL1Q9UJ83 578 aa13.13□□□□□ -0.31
DNMT1-202ENST00000359526 STMN1P16949 149 aa13.12□□□□□ -0.31
DNMT1-202ENST00000359526 STX1BP61266 288 aa13.12□□□□□ -0.31
DNMT1-202ENST00000359526 TNFAIP2Q03169 654 aa13.12□□□□□ -0.31
DNMT1-202ENST00000359526 ARID5BQ14865 1188 aa13.12□□□□□ -0.31
DNMT1-202ENST00000359526 ATG16L1Q676U5 607 aa13.12□□□□□ -0.31
DNMT1-202ENST00000359526 RAB44Q7Z6P3 723 aaPredicted RBP13.12□□□□□ -0.31
DNMT1-202ENST00000359526 DHX40Q8IX18 779 aaKnown RBP13.12□□□□□ -0.31
DNMT1-202ENST00000359526 TRIM56Q9BRZ2 755 aaKnown RBP13.12□□□□□ -0.31
DNMT1-202ENST00000359526 CACYBPQ9HB71 228 aaKnown RBP13.12□□□□□ -0.31
DNMT1-202ENST00000359526 SUFUQ9UMX1 484 aa13.12□□□□□ -0.31
DNMT1-202ENST00000359526 MRFAP1Q9Y605 127 aa13.12□□□□□ -0.31
DNMT1-202ENST00000359526 A0A1W2PQC6 194 aa13.12□□□□□ -0.31
DNMT1-202ENST00000359526 TARSL2A2RTX5 802 aaKnown RBP13.12□□□□□ -0.31
DNMT1-202ENST00000359526 LRRN2O75325 713 aa13.12□□□□□ -0.31
DNMT1-202ENST00000359526 CSF1RP07333 972 aa13.12□□□□□ -0.31
DNMT1-202ENST00000359526 SNX1Q13596 522 aa13.12□□□□□ -0.31
DNMT1-202ENST00000359526 CYP4F22Q6NT55 531 aa13.12□□□□□ -0.31
DNMT1-202ENST00000359526 PI16Q6UXB8 463 aa13.12□□□□□ -0.31
DNMT1-202ENST00000359526 METTL23Q86XA0 190 aa13.12□□□□□ -0.31
DNMT1-202ENST00000359526 MAP3K14Q99558 947 aa13.12□□□□□ -0.31
DNMT1-202ENST00000359526 MAP3K7O43318 606 aa13.12□□□□□ -0.31
DNMT1-202ENST00000359526 XRRA1Q6P2D8 792 aa13.12□□□□□ -0.31
DNMT1-202ENST00000359526 KCTD1Q719H9 257 aa13.12□□□□□ -0.31
DNMT1-202ENST00000359526 SUGCTQ9HAC7 445 aa13.12□□□□□ -0.31
DNMT1-202ENST00000359526 KIAA1586Q9HCI6 787 aa13.12□□□□□ -0.31
DNMT1-202ENST00000359526 HSPA8P11142 646 aaKnown RBP13.12□□□□□ -0.31
DNMT1-202ENST00000359526 MCAMP43121 646 aa13.12□□□□□ -0.31
DNMT1-202ENST00000359526 SLC7A5Q01650 507 aa13.12□□□□□ -0.31
DNMT1-202ENST00000359526 SLC15A2Q16348 729 aa13.12□□□□□ -0.31
DNMT1-202ENST00000359526 MFSD14CQ5VZR4 134 aa13.12□□□□□ -0.31
DNMT1-202ENST00000359526 KRT39Q6A163 491 aa13.12□□□□□ -0.31
DNMT1-202ENST00000359526 EDEM3Q9BZQ6 932 aa13.12□□□□□ -0.31
DNMT1-202ENST00000359526 ZCCHC17Q9NP64 241 aaKnown RBP13.12□□□□□ -0.31
DNMT1-202ENST00000359526 NOP53Q9NZM5 478 aaKnown RBP13.12□□□□□ -0.31
DNMT1-202ENST00000359526 BAG5Q9UL15 447 aa13.12□□□□□ -0.31
DNMT1-202ENST00000359526 ZDHHC9Q9Y397 364 aa13.12□□□□□ -0.31
DNMT1-202ENST00000359526 ADGRG1Q9Y653 693 aa13.12□□□□□ -0.31
DNMT1-202ENST00000359526 USP17L15C9J2P7 530 aa13.11□□□□□ -0.31
DNMT1-202ENST00000359526 USP17L13C9JLJ4 530 aa13.11□□□□□ -0.31
DNMT1-202ENST00000359526 USP17L11C9JVI0 530 aa13.11□□□□□ -0.31
DNMT1-202ENST00000359526 USP17L18D6R9N7 530 aa13.11□□□□□ -0.31
DNMT1-202ENST00000359526 USP17L22D6RA61 530 aa13.11□□□□□ -0.31
DNMT1-202ENST00000359526 USP17L17D6RBQ6 530 aa13.11□□□□□ -0.31
DNMT1-202ENST00000359526 USP17L19D6RCP7 530 aa13.11□□□□□ -0.31
DNMT1-202ENST00000359526 USP17L20D6RJB6 530 aa13.11□□□□□ -0.31
DNMT1-202ENST00000359526 C21orf2O43822 256 aa13.11□□□□□ -0.31
DNMT1-202ENST00000359526 LDHAP00338 332 aaKnown RBP13.11□□□□□ -0.31
DNMT1-202ENST00000359526 IGKV5-2P06315 115 aa13.11□□□□□ -0.31
DNMT1-202ENST00000359526 USP17L24Q0WX57 530 aa13.11□□□□□ -0.31
DNMT1-202ENST00000359526 SLC10A5Q5PT55 438 aa13.11□□□□□ -0.31
DNMT1-202ENST00000359526 CXorf56Q9H5V9 222 aa13.11□□□□□ -0.31
DNMT1-202ENST00000359526 ADAMTS1Q9UHI8 967 aa13.11□□□□□ -0.31
DNMT1-202ENST00000359526 CDC25AP30304 524 aa13.11□□□□□ -0.31
DNMT1-202ENST00000359526 JADE1Q6IE81 842 aa13.11□□□□□ -0.31
DNMT1-202ENST00000359526 MORC4Q8TE76 937 aa13.11□□□□□ -0.31
DNMT1-202ENST00000359526 FAM170AA1A519 330 aa13.11□□□□□ -0.31
DNMT1-202ENST00000359526 SPECC1L-ADORA2AF8WAN1 911 aa13.11□□□□□ -0.31
DNMT1-202ENST00000359526 MGEA5O60502 916 aa13.11□□□□□ -0.31
DNMT1-202ENST00000359526 FGGP02679 453 aa13.11□□□□□ -0.31
DNMT1-202ENST00000359526 SRLQ86TD4 932 aa13.11□□□□□ -0.31
DNMT1-202ENST00000359526 ARMC2Q8NEN0 867 aa13.11□□□□□ -0.31
DNMT1-202ENST00000359526 CREB3O43889 395 aa13.11□□□□□ -0.31
DNMT1-202ENST00000359526 PALMO75781 387 aa13.11□□□□□ -0.31
DNMT1-202ENST00000359526 KRT76Q01546 638 aa13.11□□□□□ -0.31
DNMT1-202ENST00000359526 CACNB1Q02641 598 aaPredicted RBP13.11□□□□□ -0.31
DNMT1-202ENST00000359526 HLFQ16534 295 aa13.11□□□□□ -0.31
DNMT1-202ENST00000359526 SH3GL3Q99963 347 aa13.11□□□□□ -0.31
DNMT1-202ENST00000359526 AP1M1Q9BXS5 423 aa13.11□□□□□ -0.31
DNMT1-202ENST00000359526 MTFR1LQ9H019 292 aa13.11□□□□□ -0.31
DNMT1-202ENST00000359526 RNF181Q9P0P0 153 aa13.11□□□□□ -0.31
DNMT1-202ENST00000359526 ABT1Q9ULW3 272 aaKnown RBP13.11□□□□□ -0.31
DNMT1-202ENST00000359526 GDAQ9Y2T3 454 aa13.11□□□□□ -0.31
DNMT1-202ENST00000359526 USP17L10C9JJH3 530 aa13.1□□□□□ -0.31
DNMT1-202ENST00000359526 PLEKHA8P1O95397 391 aa13.1□□□□□ -0.31
DNMT1-202ENST00000359526 CYP2C19P33261 490 aa13.1□□□□□ -0.31
DNMT1-202ENST00000359526 RCN2Q14257 317 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms