RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 DDX47Q9H0S4 455 aaKnown RBP12.16□□□□□ -0.46
SSU72-202ENST00000359060 KCNMB3Q9NPA1 279 aa12.16□□□□□ -0.46
SSU72-202ENST00000359060 SHANK3Q9BYB0 1731 aa12.16□□□□□ -0.46
SSU72-202ENST00000359060 CACNA1SQ13698 1873 aa12.15□□□□□ -0.46
SSU72-202ENST00000359060 SPDYE2BA6NHP3 402 aa12.15□□□□□ -0.46
SSU72-202ENST00000359060 ANKRD65E5RJM6 399 aa12.15□□□□□ -0.46
SSU72-202ENST00000359060 SPDYE6P0CI01 402 aa12.15□□□□□ -0.46
SSU72-202ENST00000359060 CYP2C19P33261 490 aa12.15□□□□□ -0.46
SSU72-202ENST00000359060 NAP1L3Q99457 506 aaPredicted RBP12.15□□□□□ -0.46
SSU72-202ENST00000359060 PLVAPQ9BX97 442 aa12.15□□□□□ -0.46
SSU72-202ENST00000359060 TUFT1Q9NNX1 390 aa12.15□□□□□ -0.46
SSU72-202ENST00000359060 TMOD4Q9NZQ9 345 aa12.15□□□□□ -0.46
SSU72-202ENST00000359060 IGKV6D-41A0A0C4DH26 115 aa12.15□□□□□ -0.46
SSU72-202ENST00000359060 CTNNA1P35221 906 aaKnown RBP12.15□□□□□ -0.46
SSU72-202ENST00000359060 CETN2P41208 172 aa12.15□□□□□ -0.46
SSU72-202ENST00000359060 KCNMA1Q12791 1236 aa12.15□□□□□ -0.46
SSU72-202ENST00000359060 GMCL1P1Q8NEA9 526 aa12.15□□□□□ -0.46
SSU72-202ENST00000359060 UHMK1Q8TAS1 419 aaKnown RBP12.15□□□□□ -0.46
SSU72-202ENST00000359060 DYDC1Q8WWB3 177 aa12.15□□□□□ -0.46
SSU72-202ENST00000359060 MKL1Q969V6 931 aa12.15□□□□□ -0.46
SSU72-202ENST00000359060 IWS1Q96ST2 819 aa12.15□□□□□ -0.46
SSU72-202ENST00000359060 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.15□□□□□ -0.46
SSU72-202ENST00000359060 P4HBP07237 508 aaKnown RBP12.15□□□□□ -0.46
SSU72-202ENST00000359060 SF3A3Q12874 501 aaKnown RBP eCLIP12.15□□□□□ -0.46
SSU72-202ENST00000359060 PPP1R7Q15435 360 aa12.15□□□□□ -0.46
SSU72-202ENST00000359060 WDR44Q5JSH3 913 aa12.15□□□□□ -0.46
SSU72-202ENST00000359060 C10orf76Q5T2E6 689 aa12.15□□□□□ -0.46
SSU72-202ENST00000359060 MOXD1Q6UVY6 613 aa12.15□□□□□ -0.46
SSU72-202ENST00000359060 RNF207Q6ZRF8 634 aa12.15□□□□□ -0.46
SSU72-202ENST00000359060 SH3BP5LQ7L8J4 393 aa12.15□□□□□ -0.46
SSU72-202ENST00000359060 OTUD6AQ7L8S5 288 aa12.15□□□□□ -0.46
SSU72-202ENST00000359060 HDAC7Q8WUI4 952 aa12.15□□□□□ -0.46
SSU72-202ENST00000359060 ABCA3Q99758 1704 aa12.15□□□□□ -0.46
SSU72-202ENST00000359060 TIAM2Q8IVF5 1701 aa12.15□□□□□ -0.47
SSU72-202ENST00000359060 ZNF263O14978 683 aa12.15□□□□□ -0.47
SSU72-202ENST00000359060 EVI5O60447 810 aa12.15□□□□□ -0.47
SSU72-202ENST00000359060 ATP2C2O75185 946 aa12.15□□□□□ -0.47
SSU72-202ENST00000359060 PON1P27169 355 aa12.15□□□□□ -0.47
SSU72-202ENST00000359060 QARSP47897 775 aaKnown RBP12.15□□□□□ -0.47
SSU72-202ENST00000359060 SLC12A3P55017 1021 aa12.15□□□□□ -0.47
SSU72-202ENST00000359060 MAP2K1Q02750 393 aaPredicted RBP12.15□□□□□ -0.47
SSU72-202ENST00000359060 PHLDB2Q86SQ0 1253 aa12.15□□□□□ -0.47
SSU72-202ENST00000359060 BCAS4Q8TDM0 211 aa12.15□□□□□ -0.47
SSU72-202ENST00000359060 KIFAP3Q92845 792 aa12.15□□□□□ -0.47
SSU72-202ENST00000359060 TMEM206Q9H813 350 aa12.15□□□□□ -0.47
SSU72-202ENST00000359060 KMT5AQ9NQR1 393 aa12.15□□□□□ -0.47
SSU72-202ENST00000359060 SEPT9Q9UHD8 586 aaPredicted RBP12.15□□□□□ -0.47
SSU72-202ENST00000359060 MTUS1Q9ULD2 1270 aa12.15□□□□□ -0.47
SSU72-202ENST00000359060 EMSYQ7Z589 1322 aa12.14□□□□□ -0.47
SSU72-202ENST00000359060 MYH15Q9Y2K3 1946 aa12.14□□□□□ -0.47
SSU72-202ENST00000359060 TARSL2A2RTX5 802 aaKnown RBP12.14□□□□□ -0.47
SSU72-202ENST00000359060 ZBTB7AO95365 584 aa12.14□□□□□ -0.47
SSU72-202ENST00000359060 COG2Q14746 738 aa12.14□□□□□ -0.47
SSU72-202ENST00000359060 KRT71Q3SY84 523 aa12.14□□□□□ -0.47
SSU72-202ENST00000359060 PRAMEF18Q5VWM3 479 aa12.14□□□□□ -0.47
SSU72-202ENST00000359060 CCDC105Q8IYK2 499 aa12.14□□□□□ -0.47
SSU72-202ENST00000359060 POLR3CQ9BUI4 534 aaPredicted RBP12.14□□□□□ -0.47
SSU72-202ENST00000359060 CAPS2Q9BXY5 557 aa12.14□□□□□ -0.47
SSU72-202ENST00000359060 INTS2Q9H0H0 1204 aaKnown RBP12.14□□□□□ -0.47
SSU72-202ENST00000359060 IKZF4Q9H2S9 585 aa12.14□□□□□ -0.47
SSU72-202ENST00000359060 RAB21Q9UL25 225 aa12.14□□□□□ -0.47
SSU72-202ENST00000359060 TMX2Q9Y320 296 aa12.14□□□□□ -0.47
SSU72-202ENST00000359060 MYH8P13535 1937 aa12.14□□□□□ -0.47
SSU72-202ENST00000359060 FGGP02679 453 aa12.14□□□□□ -0.47
SSU72-202ENST00000359060 FMO5P49326 533 aa12.14□□□□□ -0.47
SSU72-202ENST00000359060 AMPD2Q01433 879 aa12.14□□□□□ -0.47
SSU72-202ENST00000359060 STRN3Q13033 797 aa12.14□□□□□ -0.47
SSU72-202ENST00000359060 ZNF211Q13398 564 aaPredicted RBP12.14□□□□□ -0.47
SSU72-202ENST00000359060 NAB2Q15742 525 aa12.14□□□□□ -0.47
SSU72-202ENST00000359060 Q4G0T1 1027 aa12.14□□□□□ -0.47
SSU72-202ENST00000359060 EMBQ6PCB8 327 aa12.14□□□□□ -0.47
SSU72-202ENST00000359060 SAAL1Q96ER3 474 aa12.14□□□□□ -0.47
SSU72-202ENST00000359060 SCLT1Q96NL6 688 aa12.14□□□□□ -0.47
SSU72-202ENST00000359060 IMPG2Q9BZV3 1241 aa12.14□□□□□ -0.47
SSU72-202ENST00000359060 UNC45AQ9H3U1 944 aa12.14□□□□□ -0.47
SSU72-202ENST00000359060 SEL1LQ9UBV2 794 aa12.14□□□□□ -0.47
SSU72-202ENST00000359060 MYZAPP0CAP1 466 aa12.14□□□□□ -0.47
SSU72-202ENST00000359060 SLC15A2Q16348 729 aa12.14□□□□□ -0.47
SSU72-202ENST00000359060 GRIPAP1Q4V328 841 aa12.14□□□□□ -0.47
SSU72-202ENST00000359060 ARSHQ5FYA8 562 aa12.14□□□□□ -0.47
SSU72-202ENST00000359060 XXYLT1Q8NBI6 393 aa12.14□□□□□ -0.47
SSU72-202ENST00000359060 BAP1Q92560 729 aa12.14□□□□□ -0.47
SSU72-202ENST00000359060 SELENOSQ9BQE4 189 aa12.14□□□□□ -0.47
SSU72-202ENST00000359060 ZNRF3Q9ULT6 936 aa12.14□□□□□ -0.47
SSU72-202ENST00000359060 LRP5O75197 1615 aa12.13□□□□□ -0.47
SSU72-202ENST00000359060 NBPF9Q3BBW0 867 aa12.13□□□□□ -0.47
SSU72-202ENST00000359060 WDR93Q6P2C0 686 aa12.13□□□□□ -0.47
SSU72-202ENST00000359060 PBKQ96KB5 322 aa12.13□□□□□ -0.47
SSU72-202ENST00000359060 KCNH7Q9NS40 1196 aa12.13□□□□□ -0.47
SSU72-202ENST00000359060 IRS2Q9Y4H2 1338 aa12.13□□□□□ -0.47
SSU72-202ENST00000359060 LRRIQ4A6NIV6 560 aa12.13□□□□□ -0.47
SSU72-202ENST00000359060 GOLGA8KD6RF30 607 aa12.13□□□□□ -0.47
SSU72-202ENST00000359060 DPEP1P16444 411 aa12.13□□□□□ -0.47
SSU72-202ENST00000359060 CARSP49589 748 aaKnown RBP12.13□□□□□ -0.47
SSU72-202ENST00000359060 LIG4P49917 911 aa12.13□□□□□ -0.47
SSU72-202ENST00000359060 GALCP54803 685 aa12.13□□□□□ -0.47
SSU72-202ENST00000359060 ZNF571Q7Z3V5 609 aaPredicted RBP12.13□□□□□ -0.47
SSU72-202ENST00000359060 HAUS6Q7Z4H7 955 aa12.13□□□□□ -0.47
SSU72-202ENST00000359060 ARFGAP2Q8N6H7 521 aa12.13□□□□□ -0.47
SSU72-202ENST00000359060 CCDC114Q96M63 670 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms