RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 ARHGDIAP52565 204 aa9.37□□□□□ -0.91
COL6A6-201ENST00000358511 TOB2Q14106 344 aaPredicted RBP9.37□□□□□ -0.91
COL6A6-201ENST00000358511 DARS2Q6PI48 645 aaKnown RBP9.37□□□□□ -0.91
COL6A6-201ENST00000358511 KRT26Q7Z3Y9 468 aa9.37□□□□□ -0.91
COL6A6-201ENST00000358511 TEKT4Q8WW24 435 aa9.37□□□□□ -0.91
COL6A6-201ENST00000358511 CCDC127Q96BQ5 260 aa9.37□□□□□ -0.91
COL6A6-201ENST00000358511 PAWRQ96IZ0 340 aaKnown RBP9.37□□□□□ -0.91
COL6A6-201ENST00000358511 ITIH6Q6UXX5 1313 aa9.37□□□□□ -0.91
COL6A6-201ENST00000358511 CTSWP56202 376 aa9.37□□□□□ -0.91
COL6A6-201ENST00000358511 LONP2Q86WA8 852 aa9.37□□□□□ -0.91
COL6A6-201ENST00000358511 TMCO5AQ8N6Q1 288 aa9.37□□□□□ -0.91
COL6A6-201ENST00000358511 LRRC1Q9BTT6 524 aa9.37□□□□□ -0.91
COL6A6-201ENST00000358511 ITIH4Q14624 930 aa9.37□□□□□ -0.91
COL6A6-201ENST00000358511 PI4K2BQ8TCG2 481 aa9.37□□□□□ -0.91
COL6A6-201ENST00000358511 RFX7Q2KHR2 1363 aa9.37□□□□□ -0.91
COL6A6-201ENST00000358511 MYH7BA7E2Y1 1941 aa9.37□□□□□ -0.91
COL6A6-201ENST00000358511 RNF103-CHMP3A0A140T963 221 aa9.37□□□□□ -0.91
COL6A6-201ENST00000358511 PHF20L1A8MW92 1017 aa9.37□□□□□ -0.91
COL6A6-201ENST00000358511 ABCD1P33897 745 aa9.37□□□□□ -0.91
COL6A6-201ENST00000358511 LIFRP42702 1097 aa9.37□□□□□ -0.91
COL6A6-201ENST00000358511 PTGISQ16647 500 aa9.37□□□□□ -0.91
COL6A6-201ENST00000358511 DNAJC24Q6P3W2 148 aa9.37□□□□□ -0.91
COL6A6-201ENST00000358511 KIF2CQ99661 725 aa9.37□□□□□ -0.91
COL6A6-201ENST00000358511 PLEKHG1Q9ULL1 1385 aa9.37□□□□□ -0.91
COL6A6-201ENST00000358511 A0A1B0GTH6 734 aa9.37□□□□□ -0.91
COL6A6-201ENST00000358511 EIF4A1P60842 406 aaKnown RBP9.37□□□□□ -0.91
COL6A6-201ENST00000358511 ZBTB41Q5SVQ8 909 aa9.37□□□□□ -0.91
COL6A6-201ENST00000358511 ETAA1Q9NY74 926 aa9.37□□□□□ -0.91
COL6A6-201ENST00000358511 CROCCQ5TZA2 2017 aa9.37□□□□□ -0.91
COL6A6-201ENST00000358511 ASXL2Q76L83 1435 aa9.36□□□□□ -0.91
COL6A6-201ENST00000358511 PLEKHG2Q9H7P9 1386 aa9.36□□□□□ -0.91
COL6A6-201ENST00000358511 WDR19Q8NEZ3 1342 aa9.36□□□□□ -0.91
COL6A6-201ENST00000358511 ANP32DO95626 131 aa9.36□□□□□ -0.91
COL6A6-201ENST00000358511 PLA2G4AP47712 749 aa9.36□□□□□ -0.91
COL6A6-201ENST00000358511 STAG2Q8N3U4 1231 aa9.36□□□□□ -0.91
COL6A6-201ENST00000358511 UBE2TQ9NPD8 197 aaPredicted RBP9.36□□□□□ -0.91
COL6A6-201ENST00000358511 hCG_1984214I3L0E3 225 aa9.36□□□□□ -0.91
COL6A6-201ENST00000358511 CIAO1O76071 339 aa9.36□□□□□ -0.91
COL6A6-201ENST00000358511 KITP10721 976 aa9.36□□□□□ -0.91
COL6A6-201ENST00000358511 IL2RBP14784 551 aa9.36□□□□□ -0.91
COL6A6-201ENST00000358511 SCTRP47872 440 aa9.36□□□□□ -0.91
COL6A6-201ENST00000358511 KDM7AQ6ZMT4 941 aa9.36□□□□□ -0.91
COL6A6-201ENST00000358511 ZNF713Q8N859 430 aaPredicted RBP9.36□□□□□ -0.91
COL6A6-201ENST00000358511 TTC26A0AVF1 554 aa9.36□□□□□ -0.91
COL6A6-201ENST00000358511 PSMD14O00487 310 aa9.36□□□□□ -0.91
COL6A6-201ENST00000358511 EPHB1P54762 984 aa9.36□□□□□ -0.91
COL6A6-201ENST00000358511 WWP1Q9H0M0 922 aa9.36□□□□□ -0.91
COL6A6-201ENST00000358511 ZFATQ9P243 1243 aa9.36□□□□□ -0.91
COL6A6-201ENST00000358511 CAMSAP1Q5T5Y3 1602 aa9.36□□□□□ -0.91
COL6A6-201ENST00000358511 MED14O60244 1454 aa9.36□□□□□ -0.91
COL6A6-201ENST00000358511 NOP56O00567 594 aaKnown RBP9.36□□□□□ -0.91
COL6A6-201ENST00000358511 TNNC2P02585 160 aa9.36□□□□□ -0.91
COL6A6-201ENST00000358511 DDIT3P35638 169 aa9.36□□□□□ -0.91
COL6A6-201ENST00000358511 DYNLT1P63172 113 aa9.36□□□□□ -0.91
COL6A6-201ENST00000358511 LRRC31Q6UY01 552 aa9.36□□□□□ -0.91
COL6A6-201ENST00000358511 TBC1D22AQ8WUA7 517 aa9.36□□□□□ -0.91
COL6A6-201ENST00000358511 FUT8Q9BYC5 575 aa9.36□□□□□ -0.91
COL6A6-201ENST00000358511 DDX47Q9H0S4 455 aaKnown RBP9.36□□□□□ -0.91
COL6A6-201ENST00000358511 TMEM51Q9NW97 253 aa9.36□□□□□ -0.91
COL6A6-201ENST00000358511 H0Y626 953 aa9.36□□□□□ -0.91
COL6A6-201ENST00000358511 SUPT3HO75486 399 aa9.36□□□□□ -0.91
COL6A6-201ENST00000358511 TRIM16O95361 564 aa9.36□□□□□ -0.91
COL6A6-201ENST00000358511 RABGAP1LQ5R372 815 aa9.36□□□□□ -0.91
COL6A6-201ENST00000358511 CCDC137Q6PK04 289 aaKnown RBP9.36□□□□□ -0.91
COL6A6-201ENST00000358511 CCNI2Q6ZMN8 369 aaPredicted RBP9.36□□□□□ -0.91
COL6A6-201ENST00000358511 KLC2Q9H0B6 622 aa9.36□□□□□ -0.91
COL6A6-201ENST00000358511 HNRNPDLO14979 420 aaKnown RBP9.36□□□□□ -0.91
COL6A6-201ENST00000358511 SERPINB1P30740 379 aa9.36□□□□□ -0.91
COL6A6-201ENST00000358511 DAB2P98082 770 aa9.36□□□□□ -0.91
COL6A6-201ENST00000358511 BBS9Q3SYG4 887 aa9.36□□□□□ -0.91
COL6A6-201ENST00000358511 WDR93Q6P2C0 686 aa9.36□□□□□ -0.91
COL6A6-201ENST00000358511 RBM41Q96IZ5 413 aaKnown RBP9.36□□□□□ -0.91
COL6A6-201ENST00000358511 STRNO43815 780 aa9.36□□□□□ -0.91
COL6A6-201ENST00000358511 YARSP54577 528 aaKnown RBP9.36□□□□□ -0.91
COL6A6-201ENST00000358511 LRRC14Q15048 493 aa9.36□□□□□ -0.91
COL6A6-201ENST00000358511 KIF19Q2TAC6 998 aa9.36□□□□□ -0.91
COL6A6-201ENST00000358511 HP1BP3Q5SSJ5 553 aaPredicted RBP9.36□□□□□ -0.91
COL6A6-201ENST00000358511 ZC3H12CQ9C0D7 883 aaKnown RBP9.36□□□□□ -0.91
COL6A6-201ENST00000358511 GINM1Q9NU53 330 aa9.36□□□□□ -0.91
COL6A6-201ENST00000358511 L3MBTL1Q9Y468 752 aa9.36□□□□□ -0.91
COL6A6-201ENST00000358511 ANGPTL3Q9Y5C1 460 aa9.36□□□□□ -0.91
COL6A6-201ENST00000358511 FAM47DPA6NHR8 397 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 RSPH10B2B2RC85 870 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 RSPH10BP0C881 870 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 PDXDC1Q6P996 788 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 DNAJC17Q9NVM6 304 aaKnown RBP9.35□□□□□ -0.91
COL6A6-201ENST00000358511 CDH16O75309 829 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 CFBP00751 764 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 MTF1Q14872 753 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 TAF1BQ53T94 588 aaPredicted RBP9.35□□□□□ -0.91
COL6A6-201ENST00000358511 PODNQ7Z5L7 613 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 DNAAF3Q8N9W5 541 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 ATP11CQ8NB49 1132 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 SDR42E1Q8WUS8 393 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 ADA2Q9NZK5 511 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 LRRC7Q96NW7 1537 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 MAGEA13PA6NCF6 341 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 FGFR4P22455 802 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 MAP3K10Q02779 954 aa9.35□□□□□ -0.91
COL6A6-201ENST00000358511 DEPTORQ8TB45 409 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms