RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 CPA4Q9UI42 421 aa15.7■□□□□ 0.1
NIPAL3-203ENST00000358028 RBBP6Q7Z6E9 1792 aaKnown RBP15.7■□□□□ 0.1
NIPAL3-203ENST00000358028 ZNF263O14978 683 aa15.7■□□□□ 0.1
NIPAL3-203ENST00000358028 PLA2G6O60733 806 aa15.7■□□□□ 0.1
NIPAL3-203ENST00000358028 CFBP00751 764 aa15.7■□□□□ 0.1
NIPAL3-203ENST00000358028 ATP1A1P05023 1023 aaKnown RBP15.7■□□□□ 0.1
NIPAL3-203ENST00000358028 RHOXF2BP0C7M4 288 aa15.7■□□□□ 0.1
NIPAL3-203ENST00000358028 ERCC3P19447 782 aa15.7■□□□□ 0.1
NIPAL3-203ENST00000358028 EIF4A3P38919 411 aaKnown RBP15.7■□□□□ 0.1
NIPAL3-203ENST00000358028 CYP27A1Q02318 531 aa15.7■□□□□ 0.1
NIPAL3-203ENST00000358028 MAP9Q49MG5 647 aa15.7■□□□□ 0.1
NIPAL3-203ENST00000358028 FAM160B2Q86V87 743 aa15.7■□□□□ 0.1
NIPAL3-203ENST00000358028 SFR1Q86XK3 245 aa15.7■□□□□ 0.1
NIPAL3-203ENST00000358028 KCTD17Q8N5Z5 321 aa15.7■□□□□ 0.1
NIPAL3-203ENST00000358028 CCDC155Q8N6L0 562 aa15.7■□□□□ 0.1
NIPAL3-203ENST00000358028 TRIM58Q8NG06 486 aa15.7■□□□□ 0.1
NIPAL3-203ENST00000358028 SMCR8Q8TEV9 937 aaPredicted RBP15.7■□□□□ 0.1
NIPAL3-203ENST00000358028 SECISBP2LQ93073 1101 aaKnown RBP15.7■□□□□ 0.1
NIPAL3-203ENST00000358028 RHOXF2Q9BQY4 288 aa15.7■□□□□ 0.1
NIPAL3-203ENST00000358028 RPAP3Q9H6T3 665 aaPredicted RBP15.7■□□□□ 0.1
NIPAL3-203ENST00000358028 EHMT1Q9H9B1 1298 aa15.7■□□□□ 0.1
NIPAL3-203ENST00000358028 ABCB6Q9NP58 842 aa15.7■□□□□ 0.1
NIPAL3-203ENST00000358028 PNMA3Q9UL41 463 aa15.7■□□□□ 0.1
NIPAL3-203ENST00000358028 MRPL11Q9Y3B7 192 aaKnown RBP15.7■□□□□ 0.1
NIPAL3-203ENST00000358028 DOCK3Q8IZD9 2030 aa15.69■□□□□ 0.1
NIPAL3-203ENST00000358028 EML1O00423 815 aa15.69■□□□□ 0.1
NIPAL3-203ENST00000358028 POLR3GO15318 223 aaPredicted RBP15.69■□□□□ 0.1
NIPAL3-203ENST00000358028 EYA4O95677 639 aa15.69■□□□□ 0.1
NIPAL3-203ENST00000358028 TFRCP02786 760 aaKnown RBP15.69■□□□□ 0.1
NIPAL3-203ENST00000358028 PRLRP16471 622 aa15.69■□□□□ 0.1
NIPAL3-203ENST00000358028 KIF11P52732 1056 aa15.69■□□□□ 0.1
NIPAL3-203ENST00000358028 VSNL1P62760 191 aa15.69■□□□□ 0.1
NIPAL3-203ENST00000358028 CYP4A11Q02928 519 aa15.69■□□□□ 0.1
NIPAL3-203ENST00000358028 C17orf99Q6UX52 265 aa15.69■□□□□ 0.1
NIPAL3-203ENST00000358028 EPM2AIP1Q7L775 607 aaPredicted RBP15.69■□□□□ 0.1
NIPAL3-203ENST00000358028 CACNA2D4Q7Z3S7 1137 aa15.69■□□□□ 0.1
NIPAL3-203ENST00000358028 NOA1Q8NC60 698 aaKnown RBP15.69■□□□□ 0.1
NIPAL3-203ENST00000358028 TBC1D5Q92609 795 aa15.69■□□□□ 0.1
NIPAL3-203ENST00000358028 RUBCNQ92622 972 aa15.69■□□□□ 0.1
NIPAL3-203ENST00000358028 SYN2Q92777 582 aaPredicted RBP15.69■□□□□ 0.1
NIPAL3-203ENST00000358028 VIPAS39Q9H9C1 493 aa15.69■□□□□ 0.1
NIPAL3-203ENST00000358028 PSD3Q9NYI0 1048 aa15.69■□□□□ 0.1
NIPAL3-203ENST00000358028 CEP72Q9P209 647 aa15.69■□□□□ 0.1
NIPAL3-203ENST00000358028 FAM184BQ9ULE4 1060 aa15.69■□□□□ 0.1
NIPAL3-203ENST00000358028 JRKLQ9Y4A0 524 aa15.69■□□□□ 0.1
NIPAL3-203ENST00000358028 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.69■□□□□ 0.1
NIPAL3-203ENST00000358028 TNRC18O15417 2968 aaPredicted RBP15.68■□□□□ 0.1
NIPAL3-203ENST00000358028 CETN3O15182 167 aa15.68■□□□□ 0.1
NIPAL3-203ENST00000358028 TACC1O75410 805 aa15.68■□□□□ 0.1
NIPAL3-203ENST00000358028 OSBPP22059 807 aa15.68■□□□□ 0.1
NIPAL3-203ENST00000358028 CASP5P51878 434 aa15.68■□□□□ 0.1
NIPAL3-203ENST00000358028 IRX3P78415 501 aaPredicted RBP15.68■□□□□ 0.1
NIPAL3-203ENST00000358028 CAP1Q01518 475 aa15.68■□□□□ 0.1
NIPAL3-203ENST00000358028 ITIH3Q06033 890 aa15.68■□□□□ 0.1
NIPAL3-203ENST00000358028 ADAM9Q13443 819 aa15.68■□□□□ 0.1
NIPAL3-203ENST00000358028 LPAR1Q92633 364 aa15.68■□□□□ 0.1
NIPAL3-203ENST00000358028 EXOC4Q96A65 974 aa15.68■□□□□ 0.1
NIPAL3-203ENST00000358028 LSM14BQ9BX40 385 aaKnown RBP15.68■□□□□ 0.1
NIPAL3-203ENST00000358028 TUFT1Q9NNX1 390 aa15.68■□□□□ 0.1
NIPAL3-203ENST00000358028 FEM1BQ9UK73 627 aa15.68■□□□□ 0.1
NIPAL3-203ENST00000358028 TRAF3IP3Q9Y228 551 aa15.68■□□□□ 0.1
NIPAL3-203ENST00000358028 RABGAP1Q9Y3P9 1069 aa15.68■□□□□ 0.1
NIPAL3-203ENST00000358028 PCDHA13Q9Y5I0 950 aa15.68■□□□□ 0.1
NIPAL3-203ENST00000358028 SSU72P8A0A1W2PR75 194 aa15.67■□□□□ 0.1
NIPAL3-203ENST00000358028 ENC1O14682 589 aa15.67■□□□□ 0.1
NIPAL3-203ENST00000358028 FKTNO75072 461 aa15.67■□□□□ 0.1
NIPAL3-203ENST00000358028 RGS19P49795 217 aa15.67■□□□□ 0.1
NIPAL3-203ENST00000358028 MAPK8IP2Q13387 824 aaPredicted RBP15.67■□□□□ 0.1
NIPAL3-203ENST00000358028 LRCH2Q5VUJ6 765 aa15.67■□□□□ 0.1
NIPAL3-203ENST00000358028 CATSPERGQ6ZRH7 1159 aa15.67■□□□□ 0.1
NIPAL3-203ENST00000358028 ZNF572Q7Z3I7 529 aaPredicted RBP15.67■□□□□ 0.1
NIPAL3-203ENST00000358028 SLC5A5Q92911 643 aa15.67■□□□□ 0.1
NIPAL3-203ENST00000358028 RUSC1Q9BVN2 902 aa15.67■□□□□ 0.1
NIPAL3-203ENST00000358028 IFIH1Q9BYX4 1025 aaKnown RBP15.67■□□□□ 0.1
NIPAL3-203ENST00000358028 BHMT2Q9H2M3 363 aa15.67■□□□□ 0.1
NIPAL3-203ENST00000358028 DEF6Q9H4E7 631 aa15.67■□□□□ 0.1
NIPAL3-203ENST00000358028 HDAC6Q9UBN7 1215 aa15.67■□□□□ 0.1
NIPAL3-203ENST00000358028 PJA2O43164 708 aa15.67■□□□□ 0.1
NIPAL3-203ENST00000358028 AKR1B10O60218 316 aa15.67■□□□□ 0.1
NIPAL3-203ENST00000358028 PEX10O60683 326 aa15.67■□□□□ 0.1
NIPAL3-203ENST00000358028 TBCAO75347 108 aaKnown RBP15.67■□□□□ 0.1
NIPAL3-203ENST00000358028 PSMD10O75832 226 aa15.67■□□□□ 0.1
NIPAL3-203ENST00000358028 ECM2O94769 699 aaPredicted RBP15.67■□□□□ 0.1
NIPAL3-203ENST00000358028 NOL4O94818 638 aa15.67■□□□□ 0.1
NIPAL3-203ENST00000358028 MYBP10242 640 aa15.67■□□□□ 0.1
NIPAL3-203ENST00000358028 BCRP11274 1271 aa15.67■□□□□ 0.1
NIPAL3-203ENST00000358028 SP3Q02447 781 aa15.67■□□□□ 0.1
NIPAL3-203ENST00000358028 PPP2R5CQ13362 524 aa15.67■□□□□ 0.1
NIPAL3-203ENST00000358028 KNOP1Q1ED39 458 aaKnown RBP15.67■□□□□ 0.1
NIPAL3-203ENST00000358028 BMT2Q1RMZ1 405 aa15.67■□□□□ 0.1
NIPAL3-203ENST00000358028 OTOP1Q7RTM1 612 aa15.67■□□□□ 0.1
NIPAL3-203ENST00000358028 RGL1Q9NZL6 768 aa15.67■□□□□ 0.1
NIPAL3-203ENST00000358028 RSPH10B2B2RC85 870 aa15.66■□□□□ 0.1
NIPAL3-203ENST00000358028 PDXKO00764 312 aa15.66■□□□□ 0.1
NIPAL3-203ENST00000358028 WDR46O15213 610 aaKnown RBP15.66■□□□□ 0.1
NIPAL3-203ENST00000358028 CALUO43852 315 aaPredicted RBP15.66■□□□□ 0.1
NIPAL3-203ENST00000358028 RSPH10BP0C881 870 aa15.66■□□□□ 0.1
NIPAL3-203ENST00000358028 GAP43P17677 238 aa15.66■□□□□ 0.1
NIPAL3-203ENST00000358028 NR2F2P24468 414 aa15.66■□□□□ 0.1
NIPAL3-203ENST00000358028 HOXD13P35453 343 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms