RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 CORO7P57737 925 aa22.29■■□□□ 1.16
COL13A1-202ENST00000357811 LRCH2Q5VUJ6 765 aa22.29■■□□□ 1.16
COL13A1-202ENST00000357811 PALB2Q86YC2 1186 aa22.29■■□□□ 1.16
COL13A1-202ENST00000357811 MKL1Q969V6 931 aa22.29■■□□□ 1.16
COL13A1-202ENST00000357811 MBOAT7Q96N66 472 aa22.29■■□□□ 1.16
COL13A1-202ENST00000357811 WRAP73Q9P2S5 460 aaPredicted RBP22.29■■□□□ 1.16
COL13A1-202ENST00000357811 DAPK3O43293 454 aa22.29■■□□□ 1.16
COL13A1-202ENST00000357811 RPL13P26373 211 aaKnown RBP22.29■■□□□ 1.16
COL13A1-202ENST00000357811 ZNF211Q13398 564 aaPredicted RBP22.29■■□□□ 1.16
COL13A1-202ENST00000357811 CBWD6Q4V339 395 aa22.29■■□□□ 1.16
COL13A1-202ENST00000357811 CBWD3Q5JTY5 395 aa22.29■■□□□ 1.16
COL13A1-202ENST00000357811 CBWD5Q5RIA9 395 aa22.29■■□□□ 1.16
COL13A1-202ENST00000357811 TMEM179Q6ZVK1 233 aa22.29■■□□□ 1.16
COL13A1-202ENST00000357811 LRRC57Q8N9N7 239 aa22.29■■□□□ 1.16
COL13A1-202ENST00000357811 GLT8D2Q9H1C3 349 aa22.29■■□□□ 1.16
COL13A1-202ENST00000357811 RNF14Q9UBS8 474 aa22.29■■□□□ 1.16
COL13A1-202ENST00000357811 MYO3BQ8WXR4 1341 aa22.29■■□□□ 1.16
COL13A1-202ENST00000357811 SHTN1A0MZ66 631 aa22.29■■□□□ 1.16
COL13A1-202ENST00000357811 NPR1P16066 1061 aa22.29■■□□□ 1.16
COL13A1-202ENST00000357811 Q4G0T1 1027 aa22.29■■□□□ 1.16
COL13A1-202ENST00000357811 FOXR2Q6PJQ5 311 aa22.29■■□□□ 1.16
COL13A1-202ENST00000357811 PCIF1Q9H4Z3 704 aa22.29■■□□□ 1.16
COL13A1-202ENST00000357811 TAS2R14Q9NYV8 317 aa22.29■■□□□ 1.16
COL13A1-202ENST00000357811 FAM169AQ9Y6X4 670 aa22.29■■□□□ 1.16
COL13A1-202ENST00000357811 IGSF9BQ9UPX0 1349 aa22.28■■□□□ 1.16
COL13A1-202ENST00000357811 KLRG2A4D1S0 409 aaPredicted RBP22.28■■□□□ 1.16
COL13A1-202ENST00000357811 TTI1O43156 1089 aa22.28■■□□□ 1.16
COL13A1-202ENST00000357811 ECE2O60344 883 aa22.28■■□□□ 1.16
COL13A1-202ENST00000357811 SLITRK3O94933 977 aa22.28■■□□□ 1.16
COL13A1-202ENST00000357811 LLGL1Q15334 1064 aa22.28■■□□□ 1.16
COL13A1-202ENST00000357811 AOC3Q16853 763 aa22.28■■□□□ 1.16
COL13A1-202ENST00000357811 COL23A1Q86Y22 540 aaPredicted RBP22.28■■□□□ 1.16
COL13A1-202ENST00000357811 ZC3H3Q8IXZ2 948 aaKnown RBP22.28■■□□□ 1.16
COL13A1-202ENST00000357811 LNX1Q8TBB1 728 aaPredicted RBP22.28■■□□□ 1.16
COL13A1-202ENST00000357811 PRMT6Q96LA8 375 aaPredicted RBP22.28■■□□□ 1.16
COL13A1-202ENST00000357811 DRAP1Q14919 205 aaPredicted RBP22.28■■□□□ 1.16
COL13A1-202ENST00000357811 RBM26Q5T8P6 1007 aaKnown RBP22.28■■□□□ 1.16
COL13A1-202ENST00000357811 UBLCP1Q8WVY7 318 aaPredicted RBP22.28■■□□□ 1.16
COL13A1-202ENST00000357811 PLCB1Q9NQ66 1216 aa22.28■■□□□ 1.16
COL13A1-202ENST00000357811 ZBTB21Q9ULJ3 1066 aa22.28■■□□□ 1.16
COL13A1-202ENST00000357811 FAM20AQ96MK3 541 aa22.27■■□□□ 1.16
COL13A1-202ENST00000357811 TAF1DQ9H5J8 278 aaPredicted RBP22.27■■□□□ 1.16
COL13A1-202ENST00000357811 DNAJC12Q9UKB3 198 aa22.27■■□□□ 1.16
COL13A1-202ENST00000357811 EYA4O95677 639 aa22.27■■□□□ 1.16
COL13A1-202ENST00000357811 MAGEA9P43362 315 aa22.27■■□□□ 1.16
COL13A1-202ENST00000357811 SF3A3Q12874 501 aaKnown RBP eCLIP22.27■■□□□ 1.16
COL13A1-202ENST00000357811 ELMO3Q96BJ8 720 aa22.27■■□□□ 1.16
COL13A1-202ENST00000357811 PGRMC1O00264 195 aaKnown RBP22.26■■□□□ 1.15
COL13A1-202ENST00000357811 BUB1BO60566 1050 aaPredicted RBP22.26■■□□□ 1.15
COL13A1-202ENST00000357811 NR1D1P20393 614 aa22.26■■□□□ 1.15
COL13A1-202ENST00000357811 STAT1P42224 750 aa22.26■■□□□ 1.15
COL13A1-202ENST00000357811 ODR4Q5SWX8 454 aa22.26■■□□□ 1.15
COL13A1-202ENST00000357811 AADACL2Q6P093 401 aa22.26■■□□□ 1.15
COL13A1-202ENST00000357811 VPS36Q86VN1 386 aa22.26■■□□□ 1.15
COL13A1-202ENST00000357811 HOOK2Q96ED9 719 aa22.26■■□□□ 1.15
COL13A1-202ENST00000357811 TRIM51Q9BSJ1 452 aa22.26■■□□□ 1.15
COL13A1-202ENST00000357811 LRRC4CQ9HCJ2 640 aa22.26■■□□□ 1.15
COL13A1-202ENST00000357811 PPP1R9AQ9ULJ8 1098 aa22.26■■□□□ 1.15
COL13A1-202ENST00000357811 HSD17B3P37058 310 aa22.26■■□□□ 1.15
COL13A1-202ENST00000357811 FAM178BQ8IXR5 827 aa22.26■■□□□ 1.15
COL13A1-202ENST00000357811 PPANQ9NQ55 473 aaKnown RBP22.26■■□□□ 1.15
COL13A1-202ENST00000357811 TMEM110-MUSTN1A8MSY1 372 aa22.26■■□□□ 1.15
COL13A1-202ENST00000357811 GAS7O60861 476 aa22.26■■□□□ 1.15
COL13A1-202ENST00000357811 FGGP02679 453 aa22.26■■□□□ 1.15
COL13A1-202ENST00000357811 CHRNA5P30532 468 aa22.26■■□□□ 1.15
COL13A1-202ENST00000357811 MKRN4PQ13434 485 aaPredicted RBP22.26■■□□□ 1.15
COL13A1-202ENST00000357811 DACT2Q5SW24 774 aa22.26■■□□□ 1.15
COL13A1-202ENST00000357811 ARHGAP27Q6ZUM4 889 aa22.26■■□□□ 1.15
COL13A1-202ENST00000357811 CDAN1Q8IWY9 1227 aa22.26■■□□□ 1.15
COL13A1-202ENST00000357811 FBXO28Q9NVF7 368 aa22.26■■□□□ 1.15
COL13A1-202ENST00000357811 ZMYM2Q9UBW7 1377 aa22.25■■□□□ 1.15
COL13A1-202ENST00000357811 ARP10275 920 aa22.25■■□□□ 1.15
COL13A1-202ENST00000357811 TNFRSF8P28908 595 aa22.25■■□□□ 1.15
COL13A1-202ENST00000357811 USP8P40818 1118 aa22.25■■□□□ 1.15
COL13A1-202ENST00000357811 TATDN1Q6P1N9 297 aa22.25■■□□□ 1.15
COL13A1-202ENST00000357811 OTOP1Q7RTM1 612 aa22.25■■□□□ 1.15
COL13A1-202ENST00000357811 SYCP3Q8IZU3 236 aa22.25■■□□□ 1.15
COL13A1-202ENST00000357811 SLC35G2Q8TBE7 412 aa22.25■■□□□ 1.15
COL13A1-202ENST00000357811 FOCADQ5VW36 1801 aa22.25■■□□□ 1.15
COL13A1-202ENST00000357811 IGLV3-22A0A075B6J6 115 aa22.25■■□□□ 1.15
COL13A1-202ENST00000357811 ECHS1P30084 290 aa22.25■■□□□ 1.15
COL13A1-202ENST00000357811 ALDH1B1P30837 517 aa22.25■■□□□ 1.15
COL13A1-202ENST00000357811 CTNNA1P35221 906 aaKnown RBP22.25■■□□□ 1.15
COL13A1-202ENST00000357811 ZNF746Q6NUN9 644 aaPredicted RBP22.25■■□□□ 1.15
COL13A1-202ENST00000357811 PODNQ7Z5L7 613 aa22.25■■□□□ 1.15
COL13A1-202ENST00000357811 ARHGEF26Q96DR7 871 aa22.25■■□□□ 1.15
COL13A1-202ENST00000357811 PARVGQ9HBI0 331 aa22.25■■□□□ 1.15
COL13A1-202ENST00000357811 METTL14Q9HCE5 456 aaKnown RBP22.25■■□□□ 1.15
COL13A1-202ENST00000357811 LY75O60449 1722 aa22.25■■□□□ 1.15
COL13A1-202ENST00000357811 FOSP01100 380 aaPredicted RBP22.24■■□□□ 1.15
COL13A1-202ENST00000357811 PSMC2P35998 433 aaKnown RBP22.24■■□□□ 1.15
COL13A1-202ENST00000357811 MIGA2Q7L4E1 593 aa22.24■■□□□ 1.15
COL13A1-202ENST00000357811 HSD17B14Q9BPX1 270 aa22.24■■□□□ 1.15
COL13A1-202ENST00000357811 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.24■■□□□ 1.15
COL13A1-202ENST00000357811 TMOD4Q9NZQ9 345 aa22.24■■□□□ 1.15
COL13A1-202ENST00000357811 FBXL5Q9UKA1 691 aa22.24■■□□□ 1.15
COL13A1-202ENST00000357811 BZW2Q9Y6E2 419 aaKnown RBP22.24■■□□□ 1.15
COL13A1-202ENST00000357811 TBX3O15119 743 aa22.24■■□□□ 1.15
COL13A1-202ENST00000357811 JAM2P57087 298 aa22.24■■□□□ 1.15
COL13A1-202ENST00000357811 UAP1Q16222 522 aaPredicted RBP22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms