RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 GPRC5CQ9NQ84 441 aa28.23■■■□□ 2.11
SSBP3-202ENST00000357475 PDLIM7Q9NR12 457 aa28.23■■■□□ 2.11
SSBP3-202ENST00000357475 NRCAMQ92823 1304 aa28.23■■■□□ 2.11
SSBP3-202ENST00000357475 COL6A1P12109 1028 aa28.23■■■□□ 2.11
SSBP3-202ENST00000357475 KLRC1P26715 233 aa28.23■■■□□ 2.11
SSBP3-202ENST00000357475 ADAM17P78536 824 aa28.23■■■□□ 2.11
SSBP3-202ENST00000357475 PNOCQ13519 176 aa28.23■■■□□ 2.11
SSBP3-202ENST00000357475 LRRC71Q8N4P6 559 aa28.23■■■□□ 2.11
SSBP3-202ENST00000357475 CLSTN2Q9H4D0 955 aa28.23■■■□□ 2.11
SSBP3-202ENST00000357475 GTF2IRD1Q9UHL9 959 aa28.23■■■□□ 2.11
SSBP3-202ENST00000357475 MYH11P35749 1972 aa28.22■■■□□ 2.11
SSBP3-202ENST00000357475 RSPH10B2B2RC85 870 aa28.22■■■□□ 2.11
SSBP3-202ENST00000357475 RBAK-RBAKDNI3L0D1 243 aa28.22■■■□□ 2.11
SSBP3-202ENST00000357475 TREHO43280 583 aa28.22■■■□□ 2.11
SSBP3-202ENST00000357475 MAFO75444 373 aaPredicted RBP28.22■■■□□ 2.11
SSBP3-202ENST00000357475 RSPH10BP0C881 870 aa28.22■■■□□ 2.11
SSBP3-202ENST00000357475 POLGP54098 1239 aaPredicted RBP28.22■■■□□ 2.11
SSBP3-202ENST00000357475 TBC1D8BQ0IIM8 1120 aa28.22■■■□□ 2.11
SSBP3-202ENST00000357475 MKRN4PQ13434 485 aaPredicted RBP28.22■■■□□ 2.11
SSBP3-202ENST00000357475 EMC2Q15006 297 aa28.22■■■□□ 2.11
SSBP3-202ENST00000357475 NFRKBQ6P4R8 1299 aa28.22■■■□□ 2.11
SSBP3-202ENST00000357475 MTHFD1LQ6UB35 978 aa28.22■■■□□ 2.11
SSBP3-202ENST00000357475 ANKLE1Q8NAG6 615 aa28.22■■■□□ 2.11
SSBP3-202ENST00000357475 SLC43A3Q8NBI5 491 aa28.22■■■□□ 2.11
SSBP3-202ENST00000357475 DDX12PQ92771 950 aa28.22■■■□□ 2.11
SSBP3-202ENST00000357475 DNAJC19Q96DA6 116 aa28.22■■■□□ 2.11
SSBP3-202ENST00000357475 PAWRQ96IZ0 340 aaKnown RBP28.22■■■□□ 2.11
SSBP3-202ENST00000357475 CTAGE1Q96RT6 745 aa28.22■■■□□ 2.11
SSBP3-202ENST00000357475 REEP2Q9BRK0 252 aa28.22■■■□□ 2.11
SSBP3-202ENST00000357475 MAGEF1Q9HAY2 307 aa28.22■■■□□ 2.11
SSBP3-202ENST00000357475 TMEM63CQ9P1W3 806 aa28.22■■■□□ 2.11
SSBP3-202ENST00000357475 C17orf102A2RUQ5 167 aa28.21■■■□□ 2.11
SSBP3-202ENST00000357475 TRAK2O60296 914 aa28.21■■■□□ 2.11
SSBP3-202ENST00000357475 PTMSP20962 102 aa28.21■■■□□ 2.11
SSBP3-202ENST00000357475 KLHL40Q2TBA0 621 aa28.21■■■□□ 2.11
SSBP3-202ENST00000357475 RUFY4Q6ZNE9 571 aa28.21■■■□□ 2.11
SSBP3-202ENST00000357475 SESTD1Q86VW0 696 aa28.21■■■□□ 2.11
SSBP3-202ENST00000357475 ABHD8Q96I13 439 aa28.21■■■□□ 2.11
SSBP3-202ENST00000357475 TRIM9Q9C026 710 aa28.21■■■□□ 2.11
SSBP3-202ENST00000357475 IGKV6-21A0A0C4DH24 114 aa28.2■■■□□ 2.1
SSBP3-202ENST00000357475 A0A0U1RQG5 324 aaPredicted RBP28.2■■■□□ 2.1
SSBP3-202ENST00000357475 DGAT1O75907 488 aa28.2■■■□□ 2.1
SSBP3-202ENST00000357475 ATN1P54259 1190 aaPredicted RBP28.2■■■□□ 2.1
SSBP3-202ENST00000357475 MAPK7Q13164 816 aa28.2■■■□□ 2.1
SSBP3-202ENST00000357475 GIT2Q14161 759 aa28.2■■■□□ 2.1
SSBP3-202ENST00000357475 POSTNQ15063 836 aa28.2■■■□□ 2.1
SSBP3-202ENST00000357475 DAW1Q8N136 415 aa28.2■■■□□ 2.1
SSBP3-202ENST00000357475 TMEM143Q96AN5 459 aa28.2■■■□□ 2.1
SSBP3-202ENST00000357475 C7orf25Q9BPX7 421 aa28.2■■■□□ 2.1
SSBP3-202ENST00000357475 SUGCTQ9HAC7 445 aa28.2■■■□□ 2.1
SSBP3-202ENST00000357475 ATP6V0A4Q9HBG4 840 aa28.2■■■□□ 2.1
SSBP3-202ENST00000357475 TUBE1Q9UJT0 475 aa28.2■■■□□ 2.1
SSBP3-202ENST00000357475 MBLAC1A4D2B0 266 aaPredicted RBP28.19■■■□□ 2.1
SSBP3-202ENST00000357475 RFC5P40937 340 aa28.19■■■□□ 2.1
SSBP3-202ENST00000357475 TRMT13Q9NUP7 481 aaKnown RBP28.19■■■□□ 2.1
SSBP3-202ENST00000357475 RRN3P2A6NIE6 340 aa28.18■■■□□ 2.1
SSBP3-202ENST00000357475 SFI1A8K8P3 1242 aa28.18■■■□□ 2.1
SSBP3-202ENST00000357475 ARVCFO00192 962 aa28.18■■■□□ 2.1
SSBP3-202ENST00000357475 GTPBP6O43824 516 aaPredicted RBP28.18■■■□□ 2.1
SSBP3-202ENST00000357475 HIP1RO75146 1068 aa28.18■■■□□ 2.1
SSBP3-202ENST00000357475 GUCY2CP25092 1073 aa28.18■■■□□ 2.1
SSBP3-202ENST00000357475 CLCN3P51790 818 aa28.18■■■□□ 2.1
SSBP3-202ENST00000357475 DPYDQ12882 1025 aa28.18■■■□□ 2.1
SSBP3-202ENST00000357475 EFCAB12Q6NXP0 572 aa28.18■■■□□ 2.1
SSBP3-202ENST00000357475 CAVIN1Q6NZI2 390 aaKnown RBP28.18■■■□□ 2.1
SSBP3-202ENST00000357475 METTL13Q8N6R0 699 aa28.18■■■□□ 2.1
SSBP3-202ENST00000357475 LINC01465Q8N7H1 131 aa28.18■■■□□ 2.1
SSBP3-202ENST00000357475 SLC7A3Q8WY07 619 aa28.18■■■□□ 2.1
SSBP3-202ENST00000357475 NUP62CLQ9H1M0 184 aa28.18■■■□□ 2.1
SSBP3-202ENST00000357475 KRT18P05783 430 aaKnown RBP28.18■■■□□ 2.1
SSBP3-202ENST00000357475 CDK7P50613 346 aa28.18■■■□□ 2.1
SSBP3-202ENST00000357475 FAM102BQ5T8I3 360 aa28.18■■■□□ 2.1
SSBP3-202ENST00000357475 KANK3Q6NY19 840 aa28.18■■■□□ 2.1
SSBP3-202ENST00000357475 WNT8BQ93098 351 aa28.18■■■□□ 2.1
SSBP3-202ENST00000357475 TRPV6Q9H1D0 765 aa28.18■■■□□ 2.1
SSBP3-202ENST00000357475 PPME1Q9Y570 386 aa28.18■■■□□ 2.1
SSBP3-202ENST00000357475 ASIC1P78348 528 aa28.17■■■□□ 2.1
SSBP3-202ENST00000357475 AMPD3Q01432 767 aa28.17■■■□□ 2.1
SSBP3-202ENST00000357475 SLC39A5Q6ZMH5 540 aa28.17■■■□□ 2.1
SSBP3-202ENST00000357475 C11orf49Q9H6J7 331 aa28.17■■■□□ 2.1
SSBP3-202ENST00000357475 KLRC4O43908 158 aa28.16■■■□□ 2.1
SSBP3-202ENST00000357475 B4GALT4O60513 344 aa28.16■■■□□ 2.1
SSBP3-202ENST00000357475 UBE2Q1Q7Z7E8 422 aa28.16■■■□□ 2.1
SSBP3-202ENST00000357475 BSNDQ8WZ55 320 aa28.16■■■□□ 2.1
SSBP3-202ENST00000357475 KCND2Q9NZV8 630 aa28.16■■■□□ 2.1
SSBP3-202ENST00000357475 PCDHA2Q9Y5H9 948 aa28.16■■■□□ 2.1
SSBP3-202ENST00000357475 MAGEB2O15479 319 aa28.15■■■□□ 2.1
SSBP3-202ENST00000357475 PTGISQ16647 500 aa28.15■■■□□ 2.1
SSBP3-202ENST00000357475 CNNM4Q6P4Q7 775 aa28.15■■■□□ 2.1
SSBP3-202ENST00000357475 KSR1Q8IVT5 923 aa28.15■■■□□ 2.1
SSBP3-202ENST00000357475 ELOA2Q8IYF1 753 aaPredicted RBP28.15■■■□□ 2.1
SSBP3-202ENST00000357475 ASAP3Q8TDY4 903 aa28.15■■■□□ 2.1
SSBP3-202ENST00000357475 HPS3Q969F9 1004 aa28.15■■■□□ 2.1
SSBP3-202ENST00000357475 POLR3FQ9H1D9 316 aaPredicted RBP28.15■■■□□ 2.1
SSBP3-202ENST00000357475 PCDHA5Q9Y5H7 936 aa28.15■■■□□ 2.1
SSBP3-202ENST00000357475 GNAT1P11488 350 aa28.14■■■□□ 2.1
SSBP3-202ENST00000357475 CYP2C9P11712 490 aa28.14■■■□□ 2.1
SSBP3-202ENST00000357475 IDEP14735 1019 aa28.14■■■□□ 2.1
SSBP3-202ENST00000357475 ARL2P36404 184 aa28.14■■■□□ 2.1
SSBP3-202ENST00000357475 PTPN11Q06124 597 aaPredicted RBP28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms