RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 MFSD5Q6N075 450 aa13.14□□□□□ -0.31
SMARCAL1-201ENST00000357276 SLC30A5Q8TAD4 765 aa13.14□□□□□ -0.31
SMARCAL1-201ENST00000357276 TBC1D16Q8TBP0 767 aa13.14□□□□□ -0.31
SMARCAL1-201ENST00000357276 SCFD1Q8WVM8 642 aa13.14□□□□□ -0.31
SMARCAL1-201ENST00000357276 GRHL1Q9NZI5 618 aa13.14□□□□□ -0.31
SMARCAL1-201ENST00000357276 PCDHA3Q9Y5H8 950 aa13.14□□□□□ -0.31
SMARCAL1-201ENST00000357276 CDK5RAP2Q96SN8 1893 aa13.14□□□□□ -0.31
SMARCAL1-201ENST00000357276 KAT6BQ8WYB5 2073 aa13.14□□□□□ -0.31
SMARCAL1-201ENST00000357276 USP17L3A6NCW0 530 aa13.14□□□□□ -0.31
SMARCAL1-201ENST00000357276 USP17L4A6NCW7 530 aa13.14□□□□□ -0.31
SMARCAL1-201ENST00000357276 KLRF2D3W0D1 207 aa13.14□□□□□ -0.31
SMARCAL1-201ENST00000357276 ADCY2Q08462 1091 aa13.14□□□□□ -0.31
SMARCAL1-201ENST00000357276 PPP4R3CPQ6ZMV5 832 aa13.14□□□□□ -0.31
SMARCAL1-201ENST00000357276 USP17L1Q7RTZ2 530 aa13.14□□□□□ -0.31
SMARCAL1-201ENST00000357276 DNAAF5Q86Y56 855 aa13.14□□□□□ -0.31
SMARCAL1-201ENST00000357276 GBP7Q8N8V2 638 aaPredicted RBP13.14□□□□□ -0.31
SMARCAL1-201ENST00000357276 GJD4Q96KN9 370 aaPredicted RBP13.14□□□□□ -0.31
SMARCAL1-201ENST00000357276 ANKRD27Q96NW4 1050 aa13.14□□□□□ -0.31
SMARCAL1-201ENST00000357276 AZI2Q9H6S1 392 aa13.14□□□□□ -0.31
SMARCAL1-201ENST00000357276 SIX2Q9NPC8 291 aa13.14□□□□□ -0.31
SMARCAL1-201ENST00000357276 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.14□□□□□ -0.31
SMARCAL1-201ENST00000357276 TRPC5Q9UL62 973 aaPredicted RBP13.14□□□□□ -0.31
SMARCAL1-201ENST00000357276 DDX60LQ5H9U9 1706 aaKnown RBP13.14□□□□□ -0.31
SMARCAL1-201ENST00000357276 DDX3XO00571 662 aaKnown RBP eCLIP13.14□□□□□ -0.312e-7■■□□□ 13.3
SMARCAL1-201ENST00000357276 GJB6O95452 261 aa13.14□□□□□ -0.31
SMARCAL1-201ENST00000357276 FGGP02679 453 aa13.14□□□□□ -0.31
SMARCAL1-201ENST00000357276 SLC9A1P19634 815 aa13.14□□□□□ -0.31
SMARCAL1-201ENST00000357276 PON1P27169 355 aa13.14□□□□□ -0.31
SMARCAL1-201ENST00000357276 PDE6CP51160 858 aa13.14□□□□□ -0.31
SMARCAL1-201ENST00000357276 DR1Q01658 176 aa13.14□□□□□ -0.31
SMARCAL1-201ENST00000357276 DHX34Q14147 1143 aaKnown RBP13.14□□□□□ -0.31
SMARCAL1-201ENST00000357276 FAM98CQ17RN3 349 aaKnown RBP13.14□□□□□ -0.31
SMARCAL1-201ENST00000357276 TMEM266Q2M3C6 531 aa13.14□□□□□ -0.31
SMARCAL1-201ENST00000357276 CAVIN4Q5BKX8 364 aa13.14□□□□□ -0.31
SMARCAL1-201ENST00000357276 CDK5RAP3Q96JB5 506 aa13.14□□□□□ -0.31
SMARCAL1-201ENST00000357276 CARD9Q9H257 536 aa13.14□□□□□ -0.31
SMARCAL1-201ENST00000357276 H2AFZP0C0S5 128 aa13.13□□□□□ -0.31
SMARCAL1-201ENST00000357276 DENND2CQ68D51 928 aa13.13□□□□□ -0.31
SMARCAL1-201ENST00000357276 CAPRIN2Q6IMN6 1127 aaKnown RBP13.13□□□□□ -0.31
SMARCAL1-201ENST00000357276 H2AFVQ71UI9 128 aa13.13□□□□□ -0.31
SMARCAL1-201ENST00000357276 REXO1Q8N1G1 1221 aaKnown RBP13.13□□□□□ -0.31
SMARCAL1-201ENST00000357276 SNX29Q8TEQ0 813 aa13.13□□□□□ -0.31
SMARCAL1-201ENST00000357276 NSRP1Q9H0G5 558 aaKnown RBP13.13□□□□□ -0.31
SMARCAL1-201ENST00000357276 ECT2Q9H8V3 914 aa13.13□□□□□ -0.31
SMARCAL1-201ENST00000357276 ERVK-5Q9HDB9 667 aa13.13□□□□□ -0.31
SMARCAL1-201ENST00000357276 PRKAG3Q9UGI9 489 aa13.13□□□□□ -0.31
SMARCAL1-201ENST00000357276 USP15Q9Y4E8 981 aaPredicted RBP13.13□□□□□ -0.31
SMARCAL1-201ENST00000357276 TNRC6CQ9HCJ0 1690 aaKnown RBP13.13□□□□□ -0.31
SMARCAL1-201ENST00000357276 KLHL33A6NCF5 533 aa13.13□□□□□ -0.31
SMARCAL1-201ENST00000357276 IGF2BP3O00425 579 aaKnown RBP eCLIP13.13□□□□□ -0.31
SMARCAL1-201ENST00000357276 DIAPH2O60879 1101 aa13.13□□□□□ -0.31
SMARCAL1-201ENST00000357276 WFS1O76024 890 aa13.13□□□□□ -0.31
SMARCAL1-201ENST00000357276 GFPT2O94808 682 aa13.13□□□□□ -0.31
SMARCAL1-201ENST00000357276 PTGIRP43119 386 aa13.13□□□□□ -0.31
SMARCAL1-201ENST00000357276 COPS2P61201 443 aa13.13□□□□□ -0.31
SMARCAL1-201ENST00000357276 SLC29A2Q14542 456 aa13.13□□□□□ -0.31
SMARCAL1-201ENST00000357276 PLS1Q14651 629 aa13.13□□□□□ -0.31
SMARCAL1-201ENST00000357276 ENOX2Q16206 610 aaKnown RBP13.13□□□□□ -0.31
SMARCAL1-201ENST00000357276 PTPROQ16827 1216 aa13.13□□□□□ -0.31
SMARCAL1-201ENST00000357276 KRT79Q5XKE5 535 aa13.13□□□□□ -0.31
SMARCAL1-201ENST00000357276 FRMD5Q7Z6J6 570 aa13.13□□□□□ -0.31
SMARCAL1-201ENST00000357276 DAAM2Q86T65 1068 aa13.13□□□□□ -0.31
SMARCAL1-201ENST00000357276 SELENOSQ9BQE4 189 aa13.13□□□□□ -0.31
SMARCAL1-201ENST00000357276 RAB34Q9BZG1 259 aa13.13□□□□□ -0.31
SMARCAL1-201ENST00000357276 EME2A4GXA9 379 aaPredicted RBP13.12□□□□□ -0.31
SMARCAL1-201ENST00000357276 O00370 1275 aa13.12□□□□□ -0.31
SMARCAL1-201ENST00000357276 RGS16O15492 202 aaPredicted RBP13.12□□□□□ -0.31
SMARCAL1-201ENST00000357276 KRT16P08779 473 aa13.12□□□□□ -0.31
SMARCAL1-201ENST00000357276 GCKP35557 465 aa13.12□□□□□ -0.31
SMARCAL1-201ENST00000357276 EPHA7Q15375 998 aa13.12□□□□□ -0.31
SMARCAL1-201ENST00000357276 KIAA1755Q5JYT7 1200 aa13.12□□□□□ -0.31
SMARCAL1-201ENST00000357276 UBAP2Q5T6F2 1119 aaKnown RBP13.12□□□□□ -0.31
SMARCAL1-201ENST00000357276 SYT11Q9BT88 431 aa13.12□□□□□ -0.31
SMARCAL1-201ENST00000357276 BSDC1Q9NW68 430 aaPredicted RBP13.12□□□□□ -0.31
SMARCAL1-201ENST00000357276 TMEM260Q9NX78 707 aa13.12□□□□□ -0.31
SMARCAL1-201ENST00000357276 MCM9Q9NXL9 1143 aa13.12□□□□□ -0.31
SMARCAL1-201ENST00000357276 AJAP1Q9UKB5 411 aaPredicted RBP13.12□□□□□ -0.31
SMARCAL1-201ENST00000357276 AMFRQ9UKV5 643 aa13.12□□□□□ -0.31
SMARCAL1-201ENST00000357276 DAAM1Q9Y4D1 1078 aa13.12□□□□□ -0.31
SMARCAL1-201ENST00000357276 SPDYE3A6NKU9 549 aa13.12□□□□□ -0.31
SMARCAL1-201ENST00000357276 TDP2O95551 362 aa13.12□□□□□ -0.31
SMARCAL1-201ENST00000357276 CCNB1P14635 433 aa13.12□□□□□ -0.31
SMARCAL1-201ENST00000357276 ABL2P42684 1182 aa13.12□□□□□ -0.31
SMARCAL1-201ENST00000357276 MAPK7Q13164 816 aa13.12□□□□□ -0.31
SMARCAL1-201ENST00000357276 ADAM9Q13443 819 aa13.12□□□□□ -0.31
SMARCAL1-201ENST00000357276 FBXO25Q8TCJ0 367 aa13.12□□□□□ -0.31
SMARCAL1-201ENST00000357276 DYNLL2Q96FJ2 89 aa13.12□□□□□ -0.31
SMARCAL1-201ENST00000357276 KIF9Q9HAQ2 790 aa13.12□□□□□ -0.31
SMARCAL1-201ENST00000357276 ADAM22Q9P0K1 906 aa13.12□□□□□ -0.31
SMARCAL1-201ENST00000357276 BIN2Q9UBW5 565 aaPredicted RBP13.12□□□□□ -0.31
SMARCAL1-201ENST00000357276 HDAC9Q9UKV0 1011 aa13.12□□□□□ -0.31
SMARCAL1-201ENST00000357276 CAMTA2O94983 1202 aa13.12□□□□□ -0.31
SMARCAL1-201ENST00000357276 GOLGA8HP0CJ92 632 aa13.12□□□□□ -0.31
SMARCAL1-201ENST00000357276 AUHQ13825 339 aaKnown RBP13.12□□□□□ -0.31
SMARCAL1-201ENST00000357276 MEX3CQ5U5Q3 659 aaKnown RBP13.12□□□□□ -0.31
SMARCAL1-201ENST00000357276 ERICH1Q86X53 443 aa13.12□□□□□ -0.31
SMARCAL1-201ENST00000357276 JAMLQ86YT9 394 aa13.12□□□□□ -0.31
SMARCAL1-201ENST00000357276 SAAL1Q96ER3 474 aa13.12□□□□□ -0.31
SMARCAL1-201ENST00000357276 CPVLQ9H3G5 476 aa13.12□□□□□ -0.31
SMARCAL1-201ENST00000357276 PPP1R9AQ9ULJ8 1098 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms