RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 ZFP1Q6P2D0 407 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 UNC13DQ70J99 1090 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 TRAPPC9Q96Q05 1148 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 AIPL1Q9NZN9 384 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 SERPINA10Q9UK55 444 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 ACACAQ13085 2346 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 A6NJR5 290 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 SAC3D1A6NKF1 404 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 CES2O00748 559 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 PURAQ00577 322 aaKnown RBP7.02□□□□□ -1.29
VPS13B-202ENST00000357162 MYL7Q01449 175 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 TFDP1Q14186 410 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 NLRX1Q86UT6 975 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 C1orf131Q8NDD1 294 aaKnown RBP7.02□□□□□ -1.29
VPS13B-202ENST00000357162 PSPC1Q8WXF1 523 aaKnown RBP7.02□□□□□ -1.29
VPS13B-202ENST00000357162 GOLPH3LQ9H4A5 285 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 DCLRE1BQ9H816 532 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 PSTPIP2Q9H939 334 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 TLK1Q9UKI8 766 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 PTCD1O75127 700 aaKnown RBP7.02□□□□□ -1.29
VPS13B-202ENST00000357162 NAA20P61599 178 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.02□□□□□ -1.29
VPS13B-202ENST00000357162 P3H1Q32P28 736 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 NSUN7Q8NE18 718 aaKnown RBP7.02□□□□□ -1.29
VPS13B-202ENST00000357162 ERVK-7P63135 1459 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 PRR23AA6NEV1 266 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 VHLP40337 213 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 MDH1P40925 334 aaKnown RBP7.02□□□□□ -1.29
VPS13B-202ENST00000357162 CYTH2Q99418 400 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 ZFATQ9P243 1243 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 RESTQ13127 1097 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 RASA3Q14644 834 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 SAMD1Q6SPF0 538 aaPredicted RBP7.02□□□□□ -1.29
VPS13B-202ENST00000357162 NEURL4Q96JN8 1562 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 SLC52A2Q9HAB3 445 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 RGL1Q9NZL6 768 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 TYW5A2RUC4 315 aaKnown RBP7.02□□□□□ -1.29
VPS13B-202ENST00000357162 C6orf229H3BNL8 230 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 PCCAP05165 728 aaPredicted RBP7.02□□□□□ -1.29
VPS13B-202ENST00000357162 GHRP10912 638 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 SERPINB9P50453 376 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 OLFML3Q9NRN5 406 aa7.02□□□□□ -1.29
VPS13B-202ENST00000357162 MAGED4Q96JG8 741 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 SLC5A4Q9NY91 659 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 VPS9D1Q9Y2B5 631 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 MED12Q93074 2177 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 MAP3K13O43283 966 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 MTHFSDQ2M296 383 aaKnown RBP7.01□□□□□ -1.29
VPS13B-202ENST00000357162 NFU1Q9UMS0 254 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 FSBPO95073 299 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 SCRN1Q12765 414 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 KRT27Q7Z3Y8 459 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 PHACTR3Q96KR7 559 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 TGS1Q96RS0 853 aaKnown RBP7.01□□□□□ -1.29
VPS13B-202ENST00000357162 RIOK1Q9BRS2 568 aaKnown RBP7.01□□□□□ -1.29
VPS13B-202ENST00000357162 MKNK1Q9BUB5 465 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 CCSER1Q9C0I3 900 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 HPCAL4Q9UM19 191 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 RASA4BC9J798 803 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 RASA4O43374 803 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 EEF1B2P24534 225 aaKnown RBP7.01□□□□□ -1.29
VPS13B-202ENST00000357162 RAP1GDS1P52306 607 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 NAALADL2Q58DX5 795 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 ATAD3BQ5T9A4 648 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 PCNX4Q63HM2 1172 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 UBA2Q9UBT2 640 aaPredicted RBP7.01□□□□□ -1.29
VPS13B-202ENST00000357162 LRRIQ1Q96JM4 1722 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 CYTH1Q15438 398 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 LARP6Q9BRS8 491 aaKnown RBP7.01□□□□□ -1.29
VPS13B-202ENST00000357162 SNX12Q9UMY4 172 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 SMCO2A6NFE2 343 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 ITIH2P19823 946 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 NDUFA5Q16718 116 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 FIGNQ5HY92 759 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 KIAA0825Q8IV33 1275 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 NAT9Q9BTE0 207 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 STX18Q9P2W9 335 aaKnown RBP7.01□□□□□ -1.29
VPS13B-202ENST00000357162 SNRNP200O75643 2136 aaKnown RBP7.01□□□□□ -1.29
VPS13B-202ENST00000357162 TMOD1P28289 359 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 ARL13BQ3SXY8 428 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 TTC17Q96AE7 1141 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 GIMAP4Q9NUV9 329 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 SYCE1LA8MT33 242 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 HNRNPCP07910 306 aaKnown RBP eCLIP7.01□□□□□ -1.29
VPS13B-202ENST00000357162 MAP4P27816 1152 aaKnown RBP7.01□□□□□ -1.29
VPS13B-202ENST00000357162 DSG1Q02413 1049 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 PCYOX1LQ8NBM8 494 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 RNF169Q8NCN4 708 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 PNMA1Q8ND90 353 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 BEST2Q8NFU1 509 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 TRIM56Q9BRZ2 755 aaKnown RBP7.01□□□□□ -1.29
VPS13B-202ENST00000357162 TUBGCP4Q9UGJ1 667 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 SERPINB1P30740 379 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 TRPC1P48995 793 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 CEP55Q53EZ4 464 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 PBXIP1Q96AQ6 731 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 CEP95Q96GE4 821 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 MAGEA13PA6NCF6 341 aa7.01□□□□□ -1.29
VPS13B-202ENST00000357162 SH2B2O14492 632 aaPredicted RBP7.01□□□□□ -1.29
VPS13B-202ENST00000357162 PDIA5Q14554 519 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms