RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 SCFD1Q8WVM8 642 aa20.08■□□□□ 0.81
SMARCD3-202ENST00000356800 TIPINQ9BVW5 301 aa20.08■□□□□ 0.81
SMARCD3-202ENST00000356800 SEMA6BQ9H3T3 888 aa20.08■□□□□ 0.81
SMARCD3-202ENST00000356800 NRBP2Q9NSY0 501 aa20.08■□□□□ 0.81
SMARCD3-202ENST00000356800 DYNC1LI2O43237 492 aaPredicted RBP20.07■□□□□ 0.8
SMARCD3-202ENST00000356800 DGAT1O75907 488 aa20.07■□□□□ 0.8
SMARCD3-202ENST00000356800 MMP3P08254 477 aa20.07■□□□□ 0.8
SMARCD3-202ENST00000356800 CCNE1P24864 410 aa20.07■□□□□ 0.8
SMARCD3-202ENST00000356800 ZNF75DP51815 510 aa20.07■□□□□ 0.8
SMARCD3-202ENST00000356800 SOX10P56693 466 aa20.07■□□□□ 0.8
SMARCD3-202ENST00000356800 MFSD14CQ5VZR4 134 aa20.07■□□□□ 0.8
SMARCD3-202ENST00000356800 TTI2Q6NXR4 508 aa20.07■□□□□ 0.8
SMARCD3-202ENST00000356800 MYOCDQ8IZQ8 938 aa20.07■□□□□ 0.8
SMARCD3-202ENST00000356800 P2RX5Q93086 422 aa20.07■□□□□ 0.8
SMARCD3-202ENST00000356800 FAM167AQ96KS9 214 aa20.07■□□□□ 0.8
SMARCD3-202ENST00000356800 SAMSN1Q9NSI8 373 aaKnown RBP20.07■□□□□ 0.8
SMARCD3-202ENST00000356800 SEL1LQ9UBV2 794 aa20.07■□□□□ 0.8
SMARCD3-202ENST00000356800 NRBP1Q9UHY1 535 aa20.07■□□□□ 0.8
SMARCD3-202ENST00000356800 FAM184BQ9ULE4 1060 aa20.07■□□□□ 0.8
SMARCD3-202ENST00000356800 ZBTB42B2RXF5 422 aa20.07■□□□□ 0.8
SMARCD3-202ENST00000356800 PPFIA4O75335 1185 aa20.07■□□□□ 0.8
SMARCD3-202ENST00000356800 ZNF286BP0CG31 522 aa20.07■□□□□ 0.8
SMARCD3-202ENST00000356800 MYBP10242 640 aa20.07■□□□□ 0.8
SMARCD3-202ENST00000356800 ATP1A3P13637 1013 aa20.07■□□□□ 0.8
SMARCD3-202ENST00000356800 ZNF18P17022 549 aa20.07■□□□□ 0.8
SMARCD3-202ENST00000356800 SLC26A2P50443 739 aa20.07■□□□□ 0.8
SMARCD3-202ENST00000356800 IRX5P78411 483 aaPredicted RBP20.07■□□□□ 0.8
SMARCD3-202ENST00000356800 ANKRD40Q6AI12 368 aa20.07■□□□□ 0.8
SMARCD3-202ENST00000356800 CENPPQ6IPU0 288 aa20.07■□□□□ 0.8
SMARCD3-202ENST00000356800 TLK2Q86UE8 772 aa20.07■□□□□ 0.8
SMARCD3-202ENST00000356800 ZNF296Q8WUU4 475 aaPredicted RBP20.07■□□□□ 0.8
SMARCD3-202ENST00000356800 BBXQ8WY36 941 aaPredicted RBP20.07■□□□□ 0.8
SMARCD3-202ENST00000356800 DUSP9Q99956 384 aaKnown RBP20.07■□□□□ 0.8
SMARCD3-202ENST00000356800 C16orf70Q9BSU1 422 aa20.07■□□□□ 0.8
SMARCD3-202ENST00000356800 DHX33Q9H6R0 707 aaKnown RBP20.07■□□□□ 0.8
SMARCD3-202ENST00000356800 MRPL44Q9H9J2 332 aaKnown RBP20.07■□□□□ 0.8
SMARCD3-202ENST00000356800 A6NJR5 290 aa20.06■□□□□ 0.8
SMARCD3-202ENST00000356800 FKTNO75072 461 aa20.06■□□□□ 0.8
SMARCD3-202ENST00000356800 ELNP15502 786 aa20.06■□□□□ 0.8
SMARCD3-202ENST00000356800 HSPA6P17066 643 aa20.06■□□□□ 0.8
SMARCD3-202ENST00000356800 NMT1P30419 496 aaKnown RBP20.06■□□□□ 0.8
SMARCD3-202ENST00000356800 HOXD13P35453 343 aa20.06■□□□□ 0.8
SMARCD3-202ENST00000356800 ODR4Q5SWX8 454 aa20.06■□□□□ 0.8
SMARCD3-202ENST00000356800 FAM102BQ5T8I3 360 aa20.06■□□□□ 0.8
SMARCD3-202ENST00000356800 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.06■□□□□ 0.8
SMARCD3-202ENST00000356800 MRFAP1L1Q96HT8 127 aa20.06■□□□□ 0.8
SMARCD3-202ENST00000356800 RNPEPQ9H4A4 650 aa20.06■□□□□ 0.8
SMARCD3-202ENST00000356800 ATP6V0A4Q9HBG4 840 aa20.06■□□□□ 0.8
SMARCD3-202ENST00000356800 ERAP1Q9NZ08 941 aa20.06■□□□□ 0.8
SMARCD3-202ENST00000356800 HTTP42858 3142 aa20.06■□□□□ 0.8
SMARCD3-202ENST00000356800 PLS3P13797 630 aa20.05■□□□□ 0.8
SMARCD3-202ENST00000356800 CDC25BP30305 580 aa20.05■□□□□ 0.8
SMARCD3-202ENST00000356800 EMC2Q15006 297 aa20.05■□□□□ 0.8
SMARCD3-202ENST00000356800 HSP90AA4PQ58FG1 418 aa20.05■□□□□ 0.8
SMARCD3-202ENST00000356800 MCPH1Q8NEM0 835 aa20.05■□□□□ 0.8
SMARCD3-202ENST00000356800 DRC1Q96MC2 740 aa20.05■□□□□ 0.8
SMARCD3-202ENST00000356800 CENPFP49454 3210 aa20.05■□□□□ 0.8
SMARCD3-202ENST00000356800 AKR1A1P14550 325 aa20.04■□□□□ 0.8
SMARCD3-202ENST00000356800 HOXD10P28358 340 aa20.04■□□□□ 0.8
SMARCD3-202ENST00000356800 POLGP54098 1239 aaPredicted RBP20.04■□□□□ 0.8
SMARCD3-202ENST00000356800 CACNB2Q08289 660 aaPredicted RBP20.04■□□□□ 0.8
SMARCD3-202ENST00000356800 DGKDQ16760 1214 aa20.04■□□□□ 0.8
SMARCD3-202ENST00000356800 CDKAL1Q5VV42 579 aa20.04■□□□□ 0.8
SMARCD3-202ENST00000356800 ZNF720Q7Z2F6 126 aa20.04■□□□□ 0.8
SMARCD3-202ENST00000356800 NELFCDQ8IXH7 590 aa20.04■□□□□ 0.8
SMARCD3-202ENST00000356800 FAM178BQ8IXR5 827 aa20.04■□□□□ 0.8
SMARCD3-202ENST00000356800 BSNDQ8WZ55 320 aa20.04■□□□□ 0.8
SMARCD3-202ENST00000356800 ERO1AQ96HE7 468 aa20.04■□□□□ 0.8
SMARCD3-202ENST00000356800 STRA6Q9BX79 667 aa20.04■□□□□ 0.8
SMARCD3-202ENST00000356800 KCTD10Q9H3F6 313 aa20.04■□□□□ 0.8
SMARCD3-202ENST00000356800 TSKSQ9UJT2 592 aa20.04■□□□□ 0.8
SMARCD3-202ENST00000356800 Q9Y3F1 56 aa20.04■□□□□ 0.8
SMARCD3-202ENST00000356800 PRPF6O94906 941 aaKnown RBP20.03■□□□□ 0.8
SMARCD3-202ENST00000356800 GCNT3O95395 438 aa20.03■□□□□ 0.8
SMARCD3-202ENST00000356800 BMT2Q1RMZ1 405 aa20.03■□□□□ 0.8
SMARCD3-202ENST00000356800 ZCWPW2Q504Y3 356 aa20.03■□□□□ 0.8
SMARCD3-202ENST00000356800 ZC2HC1CQ53FD0 456 aaPredicted RBP20.03■□□□□ 0.8
SMARCD3-202ENST00000356800 HS1BP3Q53T59 392 aa20.03■□□□□ 0.8
SMARCD3-202ENST00000356800 ZNF507Q8TCN5 953 aa20.03■□□□□ 0.8
SMARCD3-202ENST00000356800 LARSQ9P2J5 1176 aaKnown RBP20.03■□□□□ 0.8
SMARCD3-202ENST00000356800 EVPLQ92817 2033 aa20.03■□□□□ 0.8
SMARCD3-202ENST00000356800 BICDL2A1A5D9 508 aa20.03■□□□□ 0.8
SMARCD3-202ENST00000356800 ADCY3O60266 1144 aa20.03■□□□□ 0.8
SMARCD3-202ENST00000356800 HBP1O60381 514 aa20.03■□□□□ 0.8
SMARCD3-202ENST00000356800 PPP1R37O75864 691 aa20.03■□□□□ 0.8
SMARCD3-202ENST00000356800 GNRH1P01148 92 aa20.03■□□□□ 0.8
SMARCD3-202ENST00000356800 RFC5P40937 340 aa20.03■□□□□ 0.8
SMARCD3-202ENST00000356800 FANCCQ00597 558 aa20.03■□□□□ 0.8
SMARCD3-202ENST00000356800 KCNA1Q09470 495 aa20.03■□□□□ 0.8
SMARCD3-202ENST00000356800 TRAPPC12Q8WVT3 735 aa20.03■□□□□ 0.8
SMARCD3-202ENST00000356800 KIFAP3Q92845 792 aa20.03■□□□□ 0.8
SMARCD3-202ENST00000356800 TRPC6Q9Y210 931 aa20.03■□□□□ 0.8
SMARCD3-202ENST00000356800 PPME1Q9Y570 386 aa20.03■□□□□ 0.8
SMARCD3-202ENST00000356800 H3BRB1 525 aa20.02■□□□□ 0.8
SMARCD3-202ENST00000356800 EIF3DO15371 548 aaKnown RBP eCLIP20.02■□□□□ 0.8
SMARCD3-202ENST00000356800 DUSP11O75319 330 aaKnown RBP20.02■□□□□ 0.8
SMARCD3-202ENST00000356800 MAFO75444 373 aaPredicted RBP20.02■□□□□ 0.8
SMARCD3-202ENST00000356800 MAPTP10636 758 aaKnown RBP20.02■□□□□ 0.8
SMARCD3-202ENST00000356800 PEX3P56589 373 aa20.02■□□□□ 0.8
SMARCD3-202ENST00000356800 IRF2BP1Q8IU81 584 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms