RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 DR1Q01658 176 aa11.01□□□□□ -0.65
PTPRA-203ENST00000356147 DPY19L2P1Q6NXN4 242 aa11.01□□□□□ -0.65
PTPRA-203ENST00000356147 PRCCQ92733 491 aaPredicted RBP11.01□□□□□ -0.65
PTPRA-203ENST00000356147 REEP2Q9BRK0 252 aa11.01□□□□□ -0.65
PTPRA-203ENST00000356147 TACO1Q9BSH4 297 aaKnown RBP11.01□□□□□ -0.65
PTPRA-203ENST00000356147 EPB41L4BQ9H329 900 aa11.01□□□□□ -0.65
PTPRA-203ENST00000356147 RIOX1Q9H6W3 641 aa11.01□□□□□ -0.65
PTPRA-203ENST00000356147 NOD2Q9HC29 1040 aa11.01□□□□□ -0.65
PTPRA-203ENST00000356147 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.01□□□□□ -0.65
PTPRA-203ENST00000356147 AMFRQ9UKV5 643 aa11.01□□□□□ -0.65
PTPRA-203ENST00000356147 CCDC88AQ3V6T2 1871 aa11.01□□□□□ -0.65
PTPRA-203ENST00000356147 DCCP43146 1447 aa11.01□□□□□ -0.65
PTPRA-203ENST00000356147 ZNF335Q9H4Z2 1342 aaPredicted RBP11.01□□□□□ -0.65
PTPRA-203ENST00000356147 CCT8L1PA6NM43 557 aa11.01□□□□□ -0.65
PTPRA-203ENST00000356147 FAM196BA6NMK8 535 aa11.01□□□□□ -0.65
PTPRA-203ENST00000356147 GCNT3O95395 438 aa11.01□□□□□ -0.65
PTPRA-203ENST00000356147 EZRP15311 586 aaKnown RBP11.01□□□□□ -0.65
PTPRA-203ENST00000356147 ALG3Q92685 438 aa11.01□□□□□ -0.65
PTPRA-203ENST00000356147 SETDB2Q96T68 719 aa11.01□□□□□ -0.65
PTPRA-203ENST00000356147 A1CFQ9NQ94 594 aaKnown RBP11.01□□□□□ -0.65
PTPRA-203ENST00000356147 AGAP1Q9UPQ3 857 aa11.01□□□□□ -0.65
PTPRA-203ENST00000356147 A8MUI8 341 aa11□□□□□ -0.65
PTPRA-203ENST00000356147 NEBLO76041 1014 aa11□□□□□ -0.65
PTPRA-203ENST00000356147 ATP6V1G2O95670 118 aa11□□□□□ -0.65
PTPRA-203ENST00000356147 TRIM49P0CI25 452 aa11□□□□□ -0.65
PTPRA-203ENST00000356147 TRIM49CP0CI26 452 aa11□□□□□ -0.65
PTPRA-203ENST00000356147 PLCG2P16885 1265 aa11□□□□□ -0.65
PTPRA-203ENST00000356147 KCNJ1P48048 391 aa11□□□□□ -0.65
PTPRA-203ENST00000356147 KCNJ2P63252 427 aa11□□□□□ -0.65
PTPRA-203ENST00000356147 MTMR3Q13615 1198 aa11□□□□□ -0.65
PTPRA-203ENST00000356147 PLS1Q14651 629 aa11□□□□□ -0.65
PTPRA-203ENST00000356147 COG2Q14746 738 aa11□□□□□ -0.65
PTPRA-203ENST00000356147 PRR16Q569H4 304 aa11□□□□□ -0.65
PTPRA-203ENST00000356147 ERMARDQ5T6L9 678 aa11□□□□□ -0.65
PTPRA-203ENST00000356147 AGBL2Q5U5Z8 902 aa11□□□□□ -0.65
PTPRA-203ENST00000356147 ZNF746Q6NUN9 644 aaPredicted RBP11□□□□□ -0.65
PTPRA-203ENST00000356147 C16orf86Q6ZW13 317 aa11□□□□□ -0.65
PTPRA-203ENST00000356147 MAEAQ7L5Y9 396 aa11□□□□□ -0.65
PTPRA-203ENST00000356147 AMIGO3Q86WK7 504 aa11□□□□□ -0.65
PTPRA-203ENST00000356147 FAM129AQ9BZQ8 928 aa11□□□□□ -0.65
PTPRA-203ENST00000356147 PSTPIP2Q9H939 334 aa11□□□□□ -0.65
PTPRA-203ENST00000356147 ZBTB39O15060 712 aa11□□□□□ -0.65
PTPRA-203ENST00000356147 UPP2O95045 317 aa11□□□□□ -0.65
PTPRA-203ENST00000356147 GNA14O95837 355 aa11□□□□□ -0.65
PTPRA-203ENST00000356147 KCNA4P22459 653 aa11□□□□□ -0.65
PTPRA-203ENST00000356147 PLCB4Q15147 1175 aa11□□□□□ -0.65
PTPRA-203ENST00000356147 ZC2HC1CQ53FD0 456 aaPredicted RBP11□□□□□ -0.65
PTPRA-203ENST00000356147 CATSPER3Q86XQ3 398 aa11□□□□□ -0.65
PTPRA-203ENST00000356147 TEX2Q8IWB9 1127 aa11□□□□□ -0.65
PTPRA-203ENST00000356147 CCDC63Q8NA47 563 aa11□□□□□ -0.65
PTPRA-203ENST00000356147 MIEF2Q96C03 454 aa11□□□□□ -0.65
PTPRA-203ENST00000356147 ANKRD2Q9GZV1 360 aa11□□□□□ -0.65
PTPRA-203ENST00000356147 THAP2Q9H0W7 228 aa11□□□□□ -0.65
PTPRA-203ENST00000356147 DHX36Q9H2U1 1008 aaKnown RBP11□□□□□ -0.65
PTPRA-203ENST00000356147 ADAM7Q9H2U9 754 aa11□□□□□ -0.65
PTPRA-203ENST00000356147 SIX2Q9NPC8 291 aa11□□□□□ -0.65
PTPRA-203ENST00000356147 INTS9Q9NV88 658 aaKnown RBP11□□□□□ -0.65
PTPRA-203ENST00000356147 STXBP5LQ9Y2K9 1186 aa11□□□□□ -0.65
PTPRA-203ENST00000356147 DAAM1Q9Y4D1 1078 aa11□□□□□ -0.65
PTPRA-203ENST00000356147 CCDC188H7C350 402 aa11□□□□□ -0.65
PTPRA-203ENST00000356147 RGS16O15492 202 aaPredicted RBP11□□□□□ -0.65
PTPRA-203ENST00000356147 PMS2P54278 862 aa11□□□□□ -0.65
PTPRA-203ENST00000356147 EPHA7Q15375 998 aa11□□□□□ -0.65
PTPRA-203ENST00000356147 ZKSCAN8Q15776 578 aaPredicted RBP11□□□□□ -0.65
PTPRA-203ENST00000356147 IFI16Q16666 785 aaKnown RBP11□□□□□ -0.65
PTPRA-203ENST00000356147 WLSQ5T9L3 541 aa11□□□□□ -0.65
PTPRA-203ENST00000356147 DENND2CQ68D51 928 aa11□□□□□ -0.65
PTPRA-203ENST00000356147 C1orf131Q8NDD1 294 aaKnown RBP11□□□□□ -0.65
PTPRA-203ENST00000356147 WDR66Q8TBY9 1149 aa11□□□□□ -0.65
PTPRA-203ENST00000356147 PIGOQ8TEQ8 1089 aa11□□□□□ -0.65
PTPRA-203ENST00000356147 KRT35Q92764 455 aa11□□□□□ -0.65
PTPRA-203ENST00000356147 CALR3Q96L12 384 aaKnown RBP11□□□□□ -0.65
PTPRA-203ENST00000356147 POP1Q99575 1024 aaKnown RBP11□□□□□ -0.65
PTPRA-203ENST00000356147 LRRC27Q9C0I9 530 aa11□□□□□ -0.65
PTPRA-203ENST00000356147 TRIM33Q9UPN9 1127 aa11□□□□□ -0.65
PTPRA-203ENST00000356147 STK38LQ9Y2H1 464 aa11□□□□□ -0.65
PTPRA-203ENST00000356147 THRAP3Q9Y2W1 955 aaKnown RBP11□□□□□ -0.65
PTPRA-203ENST00000356147 SCN7AQ01118 1682 aa10.99□□□□□ -0.65
PTPRA-203ENST00000356147 TCRBV7S2A1N4TA0A589 114 aa10.99□□□□□ -0.65
PTPRA-203ENST00000356147 C5orf60A6NFR6 353 aa10.99□□□□□ -0.65
PTPRA-203ENST00000356147 ATMINO43313 823 aaPredicted RBP10.99□□□□□ -0.65
PTPRA-203ENST00000356147 NR3C1P04150 777 aa10.99□□□□□ -0.65
PTPRA-203ENST00000356147 POU5F1Q01860 360 aaKnown RBP10.99□□□□□ -0.65
PTPRA-203ENST00000356147 XRCC4Q13426 336 aa10.99□□□□□ -0.65
PTPRA-203ENST00000356147 KNOP1Q1ED39 458 aaKnown RBP10.99□□□□□ -0.65
PTPRA-203ENST00000356147 ZNF317Q96PQ6 595 aaPredicted RBP10.99□□□□□ -0.65
PTPRA-203ENST00000356147 BHMT2Q9H2M3 363 aa10.99□□□□□ -0.65
PTPRA-203ENST00000356147 MTMR4Q9NYA4 1195 aa10.99□□□□□ -0.65
PTPRA-203ENST00000356147 RGL1Q9NZL6 768 aa10.99□□□□□ -0.65
PTPRA-203ENST00000356147 LAMB1P07942 1786 aa10.99□□□□□ -0.65
PTPRA-203ENST00000356147 ANKRD63C9JTQ0 380 aa10.99□□□□□ -0.65
PTPRA-203ENST00000356147 PPIP5K2O43314 1243 aa10.99□□□□□ -0.65
PTPRA-203ENST00000356147 NMT1P30419 496 aaKnown RBP10.99□□□□□ -0.65
PTPRA-203ENST00000356147 DRP2Q13474 957 aa10.99□□□□□ -0.65
PTPRA-203ENST00000356147 GIT2Q14161 759 aa10.99□□□□□ -0.65
PTPRA-203ENST00000356147 PPP2R5AQ15172 486 aa10.99□□□□□ -0.65
PTPRA-203ENST00000356147 VPS36Q86VN1 386 aa10.99□□□□□ -0.65
PTPRA-203ENST00000356147 JAMLQ86YT9 394 aa10.99□□□□□ -0.65
PTPRA-203ENST00000356147 ANKRD42Q8N9B4 389 aa10.99□□□□□ -0.65
PTPRA-203ENST00000356147 CYP2W1Q8TAV3 490 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms