RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 PANK2Q9BZ23 570 aa17.3■□□□□ 0.36
TRIM13-201ENST00000356017 SUGCTQ9HAC7 445 aa17.3■□□□□ 0.36
TRIM13-201ENST00000356017 ATP6V0A4Q9HBG4 840 aa17.3■□□□□ 0.36
TRIM13-201ENST00000356017 KCND2Q9NZV8 630 aa17.3■□□□□ 0.36
TRIM13-201ENST00000356017 WDR81Q562E7 1941 aa17.3■□□□□ 0.36
TRIM13-201ENST00000356017 PITPNM1O00562 1244 aa17.29■□□□□ 0.36
TRIM13-201ENST00000356017 PLA2G4BP0C869 781 aa17.29■□□□□ 0.36
TRIM13-201ENST00000356017 CDC42EP1Q00587 391 aa17.29■□□□□ 0.36
TRIM13-201ENST00000356017 MCPH1Q8NEM0 835 aa17.29■□□□□ 0.36
TRIM13-201ENST00000356017 TCP11Q8WWU5 503 aa17.29■□□□□ 0.36
TRIM13-201ENST00000356017 MAP7D2Q96T17 732 aa17.29■□□□□ 0.36
TRIM13-201ENST00000356017 MTRQ99707 1265 aa17.29■□□□□ 0.36
TRIM13-201ENST00000356017 BLOC1S4Q9NUP1 217 aa17.29■□□□□ 0.36
TRIM13-201ENST00000356017 TBX21Q9UL17 535 aa17.29■□□□□ 0.36
TRIM13-201ENST00000356017 NR2E3Q9Y5X4 410 aa17.29■□□□□ 0.36
TRIM13-201ENST00000356017 TCHHQ07283 1943 aa17.29■□□□□ 0.36
TRIM13-201ENST00000356017 MKI67P46013 3256 aaKnown RBP17.29■□□□□ 0.36
TRIM13-201ENST00000356017 FAM237AA0A1B0GTK4 181 aa17.29■□□□□ 0.36
TRIM13-201ENST00000356017 A0A1B0GVL5 298 aa17.29■□□□□ 0.36
TRIM13-201ENST00000356017 GOLGA6L22H0YM25 854 aa17.29■□□□□ 0.36
TRIM13-201ENST00000356017 POLR2DO15514 142 aaKnown RBP17.29■□□□□ 0.36
TRIM13-201ENST00000356017 SSBP05455 408 aaKnown RBP eCLIP17.29■□□□□ 0.36
TRIM13-201ENST00000356017 PFKFB1P16118 471 aa17.29■□□□□ 0.36
TRIM13-201ENST00000356017 SLC12A3P55017 1021 aa17.29■□□□□ 0.36
TRIM13-201ENST00000356017 RBL2Q08999 1139 aa17.29■□□□□ 0.36
TRIM13-201ENST00000356017 EMC2Q15006 297 aa17.29■□□□□ 0.36
TRIM13-201ENST00000356017 FSIP1Q8NA03 581 aa17.29■□□□□ 0.36
TRIM13-201ENST00000356017 HIPK3Q9H422 1215 aa17.29■□□□□ 0.36
TRIM13-201ENST00000356017 PRDM5Q9NQX1 630 aaPredicted RBP17.29■□□□□ 0.36
TRIM13-201ENST00000356017 PDLIM7Q9NR12 457 aa17.29■□□□□ 0.36
TRIM13-201ENST00000356017 HPSEQ9Y251 543 aa17.29■□□□□ 0.36
TRIM13-201ENST00000356017 DNAH12Q6ZR08 3092 aa17.28■□□□□ 0.36
TRIM13-201ENST00000356017 A0A087X0B3 334 aa17.28■□□□□ 0.36
TRIM13-201ENST00000356017 KIAA0355O15063 1070 aa17.28■□□□□ 0.36
TRIM13-201ENST00000356017 USO1O60763 962 aaKnown RBP17.28■□□□□ 0.36
TRIM13-201ENST00000356017 CYP11B2P19099 503 aa17.28■□□□□ 0.36
TRIM13-201ENST00000356017 THPOP40225 353 aa17.28■□□□□ 0.36
TRIM13-201ENST00000356017 E2F4Q16254 413 aa17.28■□□□□ 0.36
TRIM13-201ENST00000356017 NAALADL2Q58DX5 795 aa17.28■□□□□ 0.36
TRIM13-201ENST00000356017 IER5Q5VY09 327 aa17.28■□□□□ 0.36
TRIM13-201ENST00000356017 RUFY4Q6ZNE9 571 aa17.28■□□□□ 0.36
TRIM13-201ENST00000356017 SV2BQ7L1I2 683 aa17.28■□□□□ 0.36
TRIM13-201ENST00000356017 C7orf61Q8IZ16 206 aa17.28■□□□□ 0.36
TRIM13-201ENST00000356017 KIAA0319LQ8IZA0 1049 aa17.28■□□□□ 0.36
TRIM13-201ENST00000356017 LINC01465Q8N7H1 131 aa17.28■□□□□ 0.36
TRIM13-201ENST00000356017 DNAJB3Q8WWF6 145 aa17.28■□□□□ 0.36
TRIM13-201ENST00000356017 ZBTB10Q96DT7 871 aa17.28■□□□□ 0.36
TRIM13-201ENST00000356017 TIPINQ9BVW5 301 aa17.28■□□□□ 0.36
TRIM13-201ENST00000356017 LRRC27Q9C0I9 530 aa17.28■□□□□ 0.36
TRIM13-201ENST00000356017 FAM49AQ9H0Q0 323 aaPredicted RBP17.28■□□□□ 0.36
TRIM13-201ENST00000356017 MAGEF1Q9HAY2 307 aa17.28■□□□□ 0.36
TRIM13-201ENST00000356017 USP25Q9UHP3 1055 aa17.28■□□□□ 0.36
TRIM13-201ENST00000356017 M0QZ92 97 aa17.27■□□□□ 0.36
TRIM13-201ENST00000356017 SYKP43405 635 aa17.27■□□□□ 0.36
TRIM13-201ENST00000356017 CLCN3P51790 818 aa17.27■□□□□ 0.36
TRIM13-201ENST00000356017 UBE2HP62256 183 aa17.27■□□□□ 0.36
TRIM13-201ENST00000356017 MCM6Q14566 821 aa17.27■□□□□ 0.36
TRIM13-201ENST00000356017 TPRNQ4KMQ1 711 aa17.27■□□□□ 0.36
TRIM13-201ENST00000356017 RINT1Q6NUQ1 792 aa17.27■□□□□ 0.36
TRIM13-201ENST00000356017 LRRC71Q8N4P6 559 aa17.27■□□□□ 0.36
TRIM13-201ENST00000356017 DHX38Q92620 1227 aaKnown RBP17.27■□□□□ 0.36
TRIM13-201ENST00000356017 DHX58Q96C10 678 aa17.27■□□□□ 0.36
TRIM13-201ENST00000356017 NOC4LQ9BVI4 516 aaKnown RBP17.27■□□□□ 0.36
TRIM13-201ENST00000356017 KAT6AQ92794 2004 aa17.27■□□□□ 0.35
TRIM13-201ENST00000356017 ASAP2O43150 1006 aa17.26■□□□□ 0.35
TRIM13-201ENST00000356017 PRPF40AO75400 957 aaKnown RBP17.26■□□□□ 0.35
TRIM13-201ENST00000356017 CKBP12277 381 aa17.26■□□□□ 0.35
TRIM13-201ENST00000356017 GUCY2CP25092 1073 aa17.26■□□□□ 0.35
TRIM13-201ENST00000356017 NDUFA8P51970 172 aa17.26■□□□□ 0.35
TRIM13-201ENST00000356017 AMPD3Q01432 767 aa17.26■□□□□ 0.35
TRIM13-201ENST00000356017 MXD4Q14582 209 aaPredicted RBP17.26■□□□□ 0.35
TRIM13-201ENST00000356017 TRIM71Q2Q1W2 868 aaKnown RBP17.26■□□□□ 0.35
TRIM13-201ENST00000356017 C1orf186Q6ZWK4 172 aa17.26■□□□□ 0.35
TRIM13-201ENST00000356017 CEP57L1Q8IYX8 460 aa17.26■□□□□ 0.35
TRIM13-201ENST00000356017 LRRC15Q8TF66 581 aa17.26■□□□□ 0.35
TRIM13-201ENST00000356017 PSPC1Q8WXF1 523 aaKnown RBP17.26■□□□□ 0.35
TRIM13-201ENST00000356017 CCDC34Q96HJ3 373 aa17.26■□□□□ 0.35
TRIM13-201ENST00000356017 XPNPEP1Q9NQW7 623 aa17.26■□□□□ 0.35
TRIM13-201ENST00000356017 BMP2KQ9NSY1 1161 aaPredicted RBP17.26■□□□□ 0.35
TRIM13-201ENST00000356017 SUCLA2Q9P2R7 463 aaPredicted RBP17.26■□□□□ 0.35
TRIM13-201ENST00000356017 AKT3Q9Y243 479 aa17.26■□□□□ 0.35
TRIM13-201ENST00000356017 TRIM43BA6NCK2 446 aa17.25■□□□□ 0.35
TRIM13-201ENST00000356017 PARNO95453 639 aaKnown RBP17.25■□□□□ 0.35
TRIM13-201ENST00000356017 TIMP1P01033 207 aa17.25■□□□□ 0.35
TRIM13-201ENST00000356017 SLFN14P0C7P3 912 aa17.25■□□□□ 0.35
TRIM13-201ENST00000356017 RAG1P15918 1043 aa17.25■□□□□ 0.35
TRIM13-201ENST00000356017 SELPP16109 830 aa17.25■□□□□ 0.35
TRIM13-201ENST00000356017 DHX8Q14562 1220 aaKnown RBP17.25■□□□□ 0.35
TRIM13-201ENST00000356017 SH3RF1Q7Z6J0 888 aa17.25■□□□□ 0.35
TRIM13-201ENST00000356017 GPBP1Q86WP2 473 aa17.25■□□□□ 0.35
TRIM13-201ENST00000356017 WNT8BQ93098 351 aa17.25■□□□□ 0.35
TRIM13-201ENST00000356017 TMEM143Q96AN5 459 aa17.25■□□□□ 0.35
TRIM13-201ENST00000356017 TRIM43Q96BQ3 446 aaPredicted RBP17.25■□□□□ 0.35
TRIM13-201ENST00000356017 TNMDQ9H2S6 317 aa17.25■□□□□ 0.35
TRIM13-201ENST00000356017 MRPS6P82932 125 aaKnown RBP17.25■□□□□ 0.35
TRIM13-201ENST00000356017 MKRN4PQ13434 485 aaPredicted RBP17.25■□□□□ 0.35
TRIM13-201ENST00000356017 KIFAP3Q92845 792 aa17.25■□□□□ 0.35
TRIM13-201ENST00000356017 DRC1Q96MC2 740 aa17.25■□□□□ 0.35
TRIM13-201ENST00000356017 RUSC1Q9BVN2 902 aa17.25■□□□□ 0.35
TRIM13-201ENST00000356017 PPP1R12CQ9BZL4 782 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms