RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 NEK2P51955 445 aa15.91■□□□□ 0.14
LMX1B-201ENST00000355497 AP2B1P63010 937 aa15.91■□□□□ 0.14
LMX1B-201ENST00000355497 DAB2P98082 770 aa15.91■□□□□ 0.14
LMX1B-201ENST00000355497 OR6B3Q8NGW1 331 aa15.91■□□□□ 0.14
LMX1B-201ENST00000355497 TLR7Q9NYK1 1049 aaKnown RBP15.91■□□□□ 0.14
LMX1B-201ENST00000355497 STX18Q9P2W9 335 aaKnown RBP15.91■□□□□ 0.14
LMX1B-201ENST00000355497 STOML1Q9UBI4 398 aa15.91■□□□□ 0.14
LMX1B-201ENST00000355497 DBNLQ9UJU6 430 aaKnown RBP15.91■□□□□ 0.14
LMX1B-201ENST00000355497 MYOM2P54296 1465 aa15.91■□□□□ 0.14
LMX1B-201ENST00000355497 HAUS5O94927 633 aa15.91■□□□□ 0.14
LMX1B-201ENST00000355497 PCYT1AP49585 367 aa15.91■□□□□ 0.14
LMX1B-201ENST00000355497 DYNC1I2Q13409 638 aaKnown RBP15.91■□□□□ 0.14
LMX1B-201ENST00000355497 ARHGEF25Q86VW2 580 aa15.91■□□□□ 0.14
LMX1B-201ENST00000355497 FTOQ9C0B1 505 aaKnown RBP eCLIP15.91■□□□□ 0.14
LMX1B-201ENST00000355497 MIF4GDA9UHW6 222 aaKnown RBP15.91■□□□□ 0.14
LMX1B-201ENST00000355497 LDHAP00338 332 aaKnown RBP15.91■□□□□ 0.14
LMX1B-201ENST00000355497 ELF1P32519 619 aa15.91■□□□□ 0.14
LMX1B-201ENST00000355497 BLVRAP53004 296 aa15.91■□□□□ 0.14
LMX1B-201ENST00000355497 PTK2BQ14289 1009 aa15.91■□□□□ 0.14
LMX1B-201ENST00000355497 NBPF9Q3BBW0 867 aa15.91■□□□□ 0.14
LMX1B-201ENST00000355497 ZNF589Q86UQ0 364 aaPredicted RBP15.91■□□□□ 0.14
LMX1B-201ENST00000355497 DONSONQ9NYP3 566 aa15.91■□□□□ 0.14
LMX1B-201ENST00000355497 ZFXP17010 805 aaPredicted RBP15.9■□□□□ 0.14
LMX1B-201ENST00000355497 KRT4P19013 534 aa15.9■□□□□ 0.14
LMX1B-201ENST00000355497 CTTNQ14247 550 aaKnown RBP15.9■□□□□ 0.14
LMX1B-201ENST00000355497 GPR162Q16538 588 aa15.9■□□□□ 0.14
LMX1B-201ENST00000355497 KIAA1755Q5JYT7 1200 aa15.9■□□□□ 0.14
LMX1B-201ENST00000355497 BEND6Q5SZJ8 279 aaPredicted RBP15.9■□□□□ 0.14
LMX1B-201ENST00000355497 MMS22LQ6ZRQ5 1243 aa15.9■□□□□ 0.14
LMX1B-201ENST00000355497 CCDC90BQ9GZT6 254 aa15.9■□□□□ 0.14
LMX1B-201ENST00000355497 FAM95CA0A1B0GW59 222 aa15.9■□□□□ 0.14
LMX1B-201ENST00000355497 AARSP49588 968 aaKnown RBP eCLIP15.9■□□□□ 0.14
LMX1B-201ENST00000355497 PDCLQ13371 301 aa15.9■□□□□ 0.14
LMX1B-201ENST00000355497 EFTUD2Q15029 972 aaKnown RBP eCLIP15.9■□□□□ 0.14
LMX1B-201ENST00000355497 PPP6R3Q5H9R7 873 aaPredicted RBP15.9■□□□□ 0.14
LMX1B-201ENST00000355497 ASNSD1Q9NWL6 643 aa15.9■□□□□ 0.14
LMX1B-201ENST00000355497 SNX24Q9Y343 169 aa15.9■□□□□ 0.14
LMX1B-201ENST00000355497 CCDC195A0A1B0GUA6 201 aa15.9■□□□□ 0.14
LMX1B-201ENST00000355497 PNMA6AP0CW24 399 aaPredicted RBP15.9■□□□□ 0.14
LMX1B-201ENST00000355497 USPL1Q5W0Q7 1092 aa15.9■□□□□ 0.14
LMX1B-201ENST00000355497 FAM47EQ6ZV65 393 aa15.9■□□□□ 0.14
LMX1B-201ENST00000355497 VPS11Q9H270 941 aa15.9■□□□□ 0.14
LMX1B-201ENST00000355497 PCDHB6Q9Y5E3 794 aa15.9■□□□□ 0.14
LMX1B-201ENST00000355497 CSPG5O95196 566 aa15.9■□□□□ 0.14
LMX1B-201ENST00000355497 FBXO38Q6PIJ6 1188 aa15.9■□□□□ 0.14
LMX1B-201ENST00000355497 TADA2BQ86TJ2 420 aa15.9■□□□□ 0.14
LMX1B-201ENST00000355497 TMCO5AQ8N6Q1 288 aa15.9■□□□□ 0.14
LMX1B-201ENST00000355497 TTC8Q8TAM2 541 aa15.9■□□□□ 0.14
LMX1B-201ENST00000355497 BTBD6Q96KE9 485 aa15.9■□□□□ 0.14
LMX1B-201ENST00000355497 NGRNQ9NPE2 291 aaKnown RBP15.9■□□□□ 0.14
LMX1B-201ENST00000355497 CEP72Q9P209 647 aa15.9■□□□□ 0.14
LMX1B-201ENST00000355497 CDC25AP30304 524 aa15.9■□□□□ 0.14
LMX1B-201ENST00000355497 RASSF3Q86WH2 238 aa15.9■□□□□ 0.14
LMX1B-201ENST00000355497 ANAPC7Q9UJX3 599 aa15.9■□□□□ 0.14
LMX1B-201ENST00000355497 STRIP2Q9ULQ0 834 aa15.9■□□□□ 0.14
LMX1B-201ENST00000355497 KAT6BQ8WYB5 2073 aa15.89■□□□□ 0.14
LMX1B-201ENST00000355497 MAST1Q9Y2H9 1570 aa15.89■□□□□ 0.13
LMX1B-201ENST00000355497 NBPF10Q6P3W6 841 aaKnown RBP15.89■□□□□ 0.13
LMX1B-201ENST00000355497 PDXDC2PQ6P474 469 aa15.89■□□□□ 0.13
LMX1B-201ENST00000355497 RAPGEF5Q92565 580 aa15.89■□□□□ 0.13
LMX1B-201ENST00000355497 SAAL1Q96ER3 474 aa15.89■□□□□ 0.13
LMX1B-201ENST00000355497 GCOM2Q9BZD3 368 aaPredicted RBP15.89■□□□□ 0.13
LMX1B-201ENST00000355497 MRFAP1Q9Y605 127 aa15.89■□□□□ 0.13
LMX1B-201ENST00000355497 RNF103-CHMP3A0A140T963 221 aa15.89■□□□□ 0.13
LMX1B-201ENST00000355497 EFCAB14O75071 495 aa15.89■□□□□ 0.13
LMX1B-201ENST00000355497 ELMSAN1Q6PJG2 1045 aa15.89■□□□□ 0.13
LMX1B-201ENST00000355497 IL17REQ8NFR9 667 aa15.89■□□□□ 0.13
LMX1B-201ENST00000355497 PALMDQ9NP74 551 aa15.89■□□□□ 0.13
LMX1B-201ENST00000355497 PRKAG2Q9UGJ0 569 aa15.89■□□□□ 0.13
LMX1B-201ENST00000355497 ADAMTS1Q9UHI8 967 aa15.89■□□□□ 0.13
LMX1B-201ENST00000355497 DNAJC12Q9UKB3 198 aa15.89■□□□□ 0.13
LMX1B-201ENST00000355497 CDV3Q9UKY7 258 aaKnown RBP15.89■□□□□ 0.13
LMX1B-201ENST00000355497 TFDP2Q14188 446 aa15.89■□□□□ 0.13
LMX1B-201ENST00000355497 ZNF667Q5HYK9 610 aa15.89■□□□□ 0.13
LMX1B-201ENST00000355497 RNF219Q5W0B1 726 aaPredicted RBP15.89■□□□□ 0.13
LMX1B-201ENST00000355497 LCORLQ8N3X6 602 aa15.89■□□□□ 0.13
LMX1B-201ENST00000355497 ASPSCR1Q9BZE9 553 aa15.89■□□□□ 0.13
LMX1B-201ENST00000355497 MLH3Q9UHC1 1453 aa15.89■□□□□ 0.13
LMX1B-201ENST00000355497 PDHA1P08559 390 aa15.89■□□□□ 0.13
LMX1B-201ENST00000355497 HNRNPH2P55795 449 aaKnown RBP15.89■□□□□ 0.13
LMX1B-201ENST00000355497 ARL6IP4Q66PJ3 421 aaKnown RBP15.89■□□□□ 0.13
LMX1B-201ENST00000355497 THEM5Q8N1Q8 247 aa15.89■□□□□ 0.13
LMX1B-201ENST00000355497 CYP26B1Q9NR63 512 aa15.89■□□□□ 0.13
LMX1B-201ENST00000355497 ADAM22Q9P0K1 906 aa15.89■□□□□ 0.13
LMX1B-201ENST00000355497 PNMA6FA0A0J9YX94 578 aa15.88■□□□□ 0.13
LMX1B-201ENST00000355497 PMS2P54278 862 aa15.88■□□□□ 0.13
LMX1B-201ENST00000355497 LBRQ14739 615 aaKnown RBP15.88■□□□□ 0.13
LMX1B-201ENST00000355497 SLC26A7Q8TE54 656 aa15.88■□□□□ 0.13
LMX1B-201ENST00000355497 ULK4Q96C45 1275 aa15.88■□□□□ 0.13
LMX1B-201ENST00000355497 CNOT8Q9UFF9 292 aaKnown RBP15.88■□□□□ 0.13
LMX1B-201ENST00000355497 IFNAR1P17181 557 aa15.88■□□□□ 0.13
LMX1B-201ENST00000355497 SMARCA1P28370 1054 aa15.88■□□□□ 0.13
LMX1B-201ENST00000355497 MXD4Q14582 209 aaPredicted RBP15.88■□□□□ 0.13
LMX1B-201ENST00000355497 K7ERI5 159 aa15.88■□□□□ 0.13
LMX1B-201ENST00000355497 MECOMQ03112 1051 aa15.88■□□□□ 0.13
LMX1B-201ENST00000355497 SUPT20HL1Q3ZLR7 823 aa15.88■□□□□ 0.13
LMX1B-201ENST00000355497 FAM160B2Q86V87 743 aa15.88■□□□□ 0.13
LMX1B-201ENST00000355497 YIPF3Q9GZM5 350 aa15.88■□□□□ 0.13
LMX1B-201ENST00000355497 DHX36Q9H2U1 1008 aaKnown RBP15.88■□□□□ 0.13
LMX1B-201ENST00000355497 CC2D2BQ6DHV5 1058 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms